| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is icc [C]
Identifier: 238025031
GI number: 238025031
Start: 2115176
End: 2116288
Strand: Reverse
Name: icc [C]
Synonym: bglu_2g16880
Alternate gene names: 238025031
Gene position: 2116288-2115176 (Counterclockwise)
Preceding gene: 238025032
Following gene: 238025030
Centisome position: 74.85
GC content: 68.37
Gene sequence:
>1113_bases ATGTTGAGATGGGTGCATTTCGGGGATCTTCATGCCTCGAGCGACGACGGCTACGAGAGCCTCGACCATCTCAGGTCGAT GATTCGCCTGGTGAATCAAGGCCTGTCCGACCGGGTCGATTTCGCGTTCCTGCCGGGCGACAACGCGAACAACGGAACGC CGGAGCAGTTCCGGCGAATCTCCGCCGAATTGTCGGCGCTGAGGCTGCCGATCTACGTGATTCCCGGCGATCACGATTAC GAGCCGGGCAATCTGGACGCGTTCAATGCGTTCGCCCAGGCCCGGTTGCCGGCATCGCGCGTCCTGAATGGCCATCGGTG CATCTTTCTGGACCTCGTCTCGGCGGGGCGCGGCGGCCCCGACTTCCGGCTCTCGGCTCCGGACCGCCAATGGCTCGAAC GGGAGCTGGCCTGCTGCGCCCAGGATCGCGAGCCGCCTGCCGTCTTCATGCATGCTTATCCCGGCGACGTCGGCGACGGG CCGGCGCTGGCGGAGGCATTCGCACGCGCCAAGGTGGCCGTGGTGGACACCGGGCACACCCACTACAACGAGCTGCTCAA CGACGGCTTCGTGATCTATGCGGCGACGCGGTCCACCGGGCAGATAGAGGAGGACGGCGGCCGGCCTGGCTTCTCGGTGG CAGCGGTGGACGGCGGCGTGGTGAGCTGGAAGTTTCATCCGCTCGATGCGGCCTGGCCTTTCGTCATGATTACGCGGCCA TCCGACCGGCGGCTGCAGCGCGGCCTGCCGACGGAGGCGGCGCACCGGCCTGGCGTTCGCGTGCTGGTGTCGAATCACGA CATCGTGTCCGTCAGCGGCGAACTGGACGGCATCCCGTTCGAGTGTTCGCCGAGCCTCACCGAAGCGGGGATCTGGCAGG CCACGCTGCCCGCGGTCCAGGCGAGCGACCCGATACCGTTGACCGTGACGGCGCGTGCGGCCGACGGGCGAAGCGGCGAG GATTCGATCACCCTGAGGGCCGGCGGCCCGGCGGGCGGGTGCGTCGAGCGCCCGGCCCCGCTCGGCACCGACGCGCACGT GGTCGAACCGTGGCCGGAGCATGGCCTGCTCGGCTCGCAGCTGGGGCCCAACAAGAACGGACGCCATTGGTGA
Upstream 100 bases:
>100_bases GCGGCAAGGCCGCGCGCTGCCTGCTCAACCCGCACGGCGAACCCGCCGGCGAGCCGCAGGCGCACCGGCGGGCCTGTGCC TGGCCGACGGAGGCGGCGCC
Downstream 100 bases:
>100_bases AACATGACTGCTCTGTATGCGCTCGAAGGATTGAATTTTTTCATGGCCGATGTGCAGGCGGGCATCGGGCCTTTCCTCGG CGTCTTTCTTCAGGCGAACG
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLRWVHFGDLHASSDDGYESLDHLRSMIRLVNQGLSDRVDFAFLPGDNANNGTPEQFRRISAELSALRLPIYVIPGDHDY EPGNLDAFNAFAQARLPASRVLNGHRCIFLDLVSAGRGGPDFRLSAPDRQWLERELACCAQDREPPAVFMHAYPGDVGDG PALAEAFARAKVAVVDTGHTHYNELLNDGFVIYAATRSTGQIEEDGGRPGFSVAAVDGGVVSWKFHPLDAAWPFVMITRP SDRRLQRGLPTEAAHRPGVRVLVSNHDIVSVSGELDGIPFECSPSLTEAGIWQATLPAVQASDPIPLTVTARAADGRSGE DSITLRAGGPAGGCVERPAPLGTDAHVVEPWPEHGLLGSQLGPNKNGRHW
Sequences:
>Translated_370_residues MLRWVHFGDLHASSDDGYESLDHLRSMIRLVNQGLSDRVDFAFLPGDNANNGTPEQFRRISAELSALRLPIYVIPGDHDY EPGNLDAFNAFAQARLPASRVLNGHRCIFLDLVSAGRGGPDFRLSAPDRQWLERELACCAQDREPPAVFMHAYPGDVGDG PALAEAFARAKVAVVDTGHTHYNELLNDGFVIYAATRSTGQIEEDGGRPGFSVAAVDGGVVSWKFHPLDAAWPFVMITRP SDRRLQRGLPTEAAHRPGVRVLVSNHDIVSVSGELDGIPFECSPSLTEAGIWQATLPAVQASDPIPLTVTARAADGRSGE DSITLRAGGPAGGCVERPAPLGTDAHVVEPWPEHGLLGSQLGPNKNGRHW >Mature_370_residues MLRWVHFGDLHASSDDGYESLDHLRSMIRLVNQGLSDRVDFAFLPGDNANNGTPEQFRRISAELSALRLPIYVIPGDHDY EPGNLDAFNAFAQARLPASRVLNGHRCIFLDLVSAGRGGPDFRLSAPDRQWLERELACCAQDREPPAVFMHAYPGDVGDG PALAEAFARAKVAVVDTGHTHYNELLNDGFVIYAATRSTGQIEEDGGRPGFSVAAVDGGVVSWKFHPLDAAWPFVMITRP SDRRLQRGLPTEAAHRPGVRVLVSNHDIVSVSGELDGIPFECSPSLTEAGIWQATLPAVQASDPIPLTVTARAADGRSGE DSITLRAGGPAGGCVERPAPLGTDAHVVEPWPEHGLLGSQLGPNKNGRHW
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39920; Mature: 39920
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRWVHFGDLHASSDDGYESLDHLRSMIRLVNQGLSDRVDFAFLPGDNANNGTPEQFRRI CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHH SAELSALRLPIYVIPGDHDYEPGNLDAFNAFAQARLPASRVLNGHRCIFLDLVSAGRGGP HHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCC DFRLSAPDRQWLERELACCAQDREPPAVFMHAYPGDVGDGPALAEAFARAKVAVVDTGHT CCEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCEEEEEECCCH HYNELLNDGFVIYAATRSTGQIEEDGGRPGFSVAAVDGGVVSWKFHPLDAAWPFVMITRP HHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEECC SDRRLQRGLPTEAAHRPGVRVLVSNHDIVSVSGELDGIPFECSPSLTEAGIWQATLPAVQ CHHHHHCCCCHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCC ASDPIPLTVTARAADGRSGEDSITLRAGGPAGGCVERPAPLGTDAHVVEPWPEHGLLGSQ CCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC LGPNKNGRHW CCCCCCCCCC >Mature Secondary Structure MLRWVHFGDLHASSDDGYESLDHLRSMIRLVNQGLSDRVDFAFLPGDNANNGTPEQFRRI CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHH SAELSALRLPIYVIPGDHDYEPGNLDAFNAFAQARLPASRVLNGHRCIFLDLVSAGRGGP HHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCC DFRLSAPDRQWLERELACCAQDREPPAVFMHAYPGDVGDGPALAEAFARAKVAVVDTGHT CCEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCEEEEEECCCH HYNELLNDGFVIYAATRSTGQIEEDGGRPGFSVAAVDGGVVSWKFHPLDAAWPFVMITRP HHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEECC SDRRLQRGLPTEAAHRPGVRVLVSNHDIVSVSGELDGIPFECSPSLTEAGIWQATLPAVQ CHHHHHCCCCHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCC ASDPIPLTVTARAADGRSGEDSITLRAGGPAGGCVERPAPLGTDAHVVEPWPEHGLLGSQ CCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC LGPNKNGRHW CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA