| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is arsB [H]
Identifier: 238025029
GI number: 238025029
Start: 2112684
End: 2113937
Strand: Reverse
Name: arsB [H]
Synonym: bglu_2g16860
Alternate gene names: 238025029
Gene position: 2113937-2112684 (Counterclockwise)
Preceding gene: 238025030
Following gene: 238025028
Centisome position: 74.77
GC content: 66.51
Gene sequence:
>1254_bases ATGAATCCAACTTTCCTCGCATGGGGCATTGCGCTCGCCGCGACGGCCGGCGTCATCCTGCGGCCGTTCCGCTGGCCCGA AGCGATCTGGGCCGTGCTCGGCGCGCTGATGCTGGTCGTGCTCGGGCTGCTGCCCGCGAAGCTCGCGTGGCAGGCGGTGG GCAAGGGCACGGACGTCTATCTTTTCCTGATCGGCATGATGCTGCTCTCGGAGCTTGGACGCAGCGAAGGCCTGTTCGAC TGGGTCGCGGTCCATGCCGTCAATCTGGCCCGGGGATCGCCGCGCAGGCTCTTCCTGCTGGTGTATCTGGTGGGTGTCGT GGTGACGACGTTCCTGTCCAACGACGCGGCCGCCGTGGTTCTCACGCCGGCGGTGTTCGCCGCCGCGAGAAAGGCGCAAA CGAAGGCGCTGCCCTTGGTCTATGTCTGCGCATTCATCGCCAACGCGGCGAGTTTCGTCCTGCCGATCTCGAACCCCGCC AATCTCGTGCTCTATGCCAACCACACGCCGGCGCTCGGTTCGTGGGTGGCACGCTTCGCCTTGCCTTCGGTGCTTGCGAT TGTCGCCACGTTCCTGATGTTGCGCTGGACGCAGCGGGCCAGTCTCGGTGGTGCGTGCGCGCGCGACTTGCCGGTGGAAG CGCTCGGCGCGAACGGCAAGCTCACGCTGGCGAGCATCGGCGTGACGGCGGTGGCGCTGCTCGTAGTCTCGGCCTTCGAT CTGCCGCTCGGTCTGCCCACCGCGGTTCTCGGCATGCTCACCGCGCTGGTCGTGCTGATCAAGAAGCGGCAGTCGCCGCT CGAGCTCGTCGGCGAGATATCCTGGAGCGTGCTGCCGCTCGTCGCCGGTCTCTTCGTGCTGGTCGAGATGCTTGACCATA CGGGCGTGATTCGCGAACTCTCCGGCTGGCTGGAGCAGGCTACGCGTCAGAATGCGTCGATCACGGCGGCCTCGGCCGGG CTGGTCATTGCCTTCGGAAGCAACGCGATCAACAACCTGCCTGCCGGACTGATCGCGAGCGCGACGGCGTTGCAGGCGCA CGCTCCCGAGCGCGTCATCGACGCGCTGCTGATCGGCGTGGACCTCGGCCCGAATCTGTCGATCACCGGCTCGCTCGCCA CCATTCTCTGGCTGTCCGCGATTCGACGGGAAGGCGAAGAAGTGAGCTTCGGGCAGTTTCTCAAGGTCGGTGGGCTCGTC ATGCTGCCCGCGCTCGCGCTGGCGCTCGCCAGCCGCCTGCTGATCGGACATTGA
Upstream 100 bases:
>100_bases TGTCGATGGGATCACTCGCGCTCTGGCTGCCGTTTAGCGCATCCCTCAAAAAAGCTTGCGGCATTCGCCGCGACGTCATT GAAGATGGCCCTCTGACCAC
Downstream 100 bases:
>100_bases TGCTACCAACGCACGGAGGTCGGACCAATGAGCCAGGCATGGATCTATCCCTTCATCATTCTGGGCGGCATCCTGCAGGC CGCAGGCGCGCCCGTCAACG
Product: Arsenical pump membrane protein
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNPTFLAWGIALAATAGVILRPFRWPEAIWAVLGALMLVVLGLLPAKLAWQAVGKGTDVYLFLIGMMLLSELGRSEGLFD WVAVHAVNLARGSPRRLFLLVYLVGVVVTTFLSNDAAAVVLTPAVFAAARKAQTKALPLVYVCAFIANAASFVLPISNPA NLVLYANHTPALGSWVARFALPSVLAIVATFLMLRWTQRASLGGACARDLPVEALGANGKLTLASIGVTAVALLVVSAFD LPLGLPTAVLGMLTALVVLIKKRQSPLELVGEISWSVLPLVAGLFVLVEMLDHTGVIRELSGWLEQATRQNASITAASAG LVIAFGSNAINNLPAGLIASATALQAHAPERVIDALLIGVDLGPNLSITGSLATILWLSAIRREGEEVSFGQFLKVGGLV MLPALALALASRLLIGH
Sequences:
>Translated_417_residues MNPTFLAWGIALAATAGVILRPFRWPEAIWAVLGALMLVVLGLLPAKLAWQAVGKGTDVYLFLIGMMLLSELGRSEGLFD WVAVHAVNLARGSPRRLFLLVYLVGVVVTTFLSNDAAAVVLTPAVFAAARKAQTKALPLVYVCAFIANAASFVLPISNPA NLVLYANHTPALGSWVARFALPSVLAIVATFLMLRWTQRASLGGACARDLPVEALGANGKLTLASIGVTAVALLVVSAFD LPLGLPTAVLGMLTALVVLIKKRQSPLELVGEISWSVLPLVAGLFVLVEMLDHTGVIRELSGWLEQATRQNASITAASAG LVIAFGSNAINNLPAGLIASATALQAHAPERVIDALLIGVDLGPNLSITGSLATILWLSAIRREGEEVSFGQFLKVGGLV MLPALALALASRLLIGH >Mature_417_residues MNPTFLAWGIALAATAGVILRPFRWPEAIWAVLGALMLVVLGLLPAKLAWQAVGKGTDVYLFLIGMMLLSELGRSEGLFD WVAVHAVNLARGSPRRLFLLVYLVGVVVTTFLSNDAAAVVLTPAVFAAARKAQTKALPLVYVCAFIANAASFVLPISNPA NLVLYANHTPALGSWVARFALPSVLAIVATFLMLRWTQRASLGGACARDLPVEALGANGKLTLASIGVTAVALLVVSAFD LPLGLPTAVLGMLTALVVLIKKRQSPLELVGEISWSVLPLVAGLFVLVEMLDHTGVIRELSGWLEQATRQNASITAASAG LVIAFGSNAINNLPAGLIASATALQAHAPERVIDALLIGVDLGPNLSITGSLATILWLSAIRREGEEVSFGQFLKVGGLV MLPALALALASRLLIGH
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=398, Percent_Identity=28.391959798995, Blast_Score=121, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 43685; Mature: 43685
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTFLAWGIALAATAGVILRPFRWPEAIWAVLGALMLVVLGLLPAKLAWQAVGKGTDVY CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LFLIGMMLLSELGRSEGLFDWVAVHAVNLARGSPRRLFLLVYLVGVVVTTFLSNDAAAVV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE LTPAVFAAARKAQTKALPLVYVCAFIANAASFVLPISNPANLVLYANHTPALGSWVARFA EHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHEEEECCCCCCEEEEECCCCHHHHHHHHHH LPSVLAIVATFLMLRWTQRASLGGACARDLPVEALGANGKLTLASIGVTAVALLVVSAFD HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHC LPLGLPTAVLGMLTALVVLIKKRQSPLELVGEISWSVLPLVAGLFVLVEMLDHTGVIREL CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SGWLEQATRQNASITAASAGLVIAFGSNAINNLPAGLIASATALQAHAPERVIDALLIGV HHHHHHHHCCCCCEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHC DLGPNLSITGSLATILWLSAIRREGEEVSFGQFLKVGGLVMLPALALALASRLLIGH CCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPTFLAWGIALAATAGVILRPFRWPEAIWAVLGALMLVVLGLLPAKLAWQAVGKGTDVY CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LFLIGMMLLSELGRSEGLFDWVAVHAVNLARGSPRRLFLLVYLVGVVVTTFLSNDAAAVV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE LTPAVFAAARKAQTKALPLVYVCAFIANAASFVLPISNPANLVLYANHTPALGSWVARFA EHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHEEEECCCCCCEEEEECCCCHHHHHHHHHH LPSVLAIVATFLMLRWTQRASLGGACARDLPVEALGANGKLTLASIGVTAVALLVVSAFD HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHC LPLGLPTAVLGMLTALVVLIKKRQSPLELVGEISWSVLPLVAGLFVLVEMLDHTGVIREL CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SGWLEQATRQNASITAASAGLVIAFGSNAINNLPAGLIASATALQAHAPERVIDALLIGV HHHHHHHHCCCCCEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHC DLGPNLSITGSLATILWLSAIRREGEEVSFGQFLKVGGLVMLPALALALASRLLIGH CCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]