Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025006
Identifier: 238025006
GI number: 238025006
Start: 2092756
End: 2093103
Strand: Reverse
Name: 238025006
Synonym: bglu_2g16630
Alternate gene names: NA
Gene position: 2093103-2092756 (Counterclockwise)
Preceding gene: 238025007
Following gene: 238025005
Centisome position: 74.03
GC content: 65.8
Gene sequence:
>348_bases ATGAGTACCCCGAATGTGAATCCCCAAGTGGTCGATGTGATCAACCAGTCGCAGTTGGCGACGATGAGCCCGCAGGTGGT GCTCACGAGCGGCGCCGGCAAGGCCTACCAGGCAGTCGCGCAATCGTCGGCCATCGCGATCCAGGACGCCACCGACGCGC TGCGCAACATCGCCACGATCGCCACCACGGCGGCCGGCGTGGCCATGGCGCAGCTGCTCGCCACCGGCGACCAGAAATAC GTCACGGTGCTGCAGCAGGCGCAGTCGCTCGTCACGACCGCATCGAGCGATTTCGGCCAGATCAGCAGCACTGCGGCGGC GCTGCTCAAAGAATTCCCCGCAGGCTGA
Upstream 100 bases:
>100_bases CGGCAATGGCGAGACATGAGCGCCGGCGCCGAATTCGTCATCGCAGTGATGCCGCGATCCGGCAGCAGTCCGGCGCGATG CCCAAGCTACGGAGTTATCG
Downstream 100 bases:
>100_bases CCGACGACGGAGACGTTTCCATGACGCTGCATATCGCTGCGAGCCAAATCCAGCAGCCCTCCCGACTTTCCGCTTCGGCG CGCTCCTGCCTGAGCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSTPNVNPQVVDVINQSQLATMSPQVVLTSGAGKAYQAVAQSSAIAIQDATDALRNIATIATTAAGVAMAQLLATGDQKY VTVLQQAQSLVTTASSDFGQISSTAAALLKEFPAG
Sequences:
>Translated_115_residues MSTPNVNPQVVDVINQSQLATMSPQVVLTSGAGKAYQAVAQSSAIAIQDATDALRNIATIATTAAGVAMAQLLATGDQKY VTVLQQAQSLVTTASSDFGQISSTAAALLKEFPAG >Mature_114_residues STPNVNPQVVDVINQSQLATMSPQVVLTSGAGKAYQAVAQSSAIAIQDATDALRNIATIATTAAGVAMAQLLATGDQKYV TVLQQAQSLVTTASSDFGQISSTAAALLKEFPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11653; Mature: 11522
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPNVNPQVVDVINQSQLATMSPQVVLTSGAGKAYQAVAQSSAIAIQDATDALRNIATI CCCCCCCHHHHHHHCCHHHCCCCCCEEEECCCCHHHHHHHHCCCEEEHHHHHHHHHHHHH ATTAAGVAMAQLLATGDQKYVTVLQQAQSLVTTASSDFGQISSTAAALLKEFPAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STPNVNPQVVDVINQSQLATMSPQVVLTSGAGKAYQAVAQSSAIAIQDATDALRNIATI CCCCCCHHHHHHHCCHHHCCCCCCEEEECCCCHHHHHHHHCCCEEEHHHHHHHHHHHHH ATTAAGVAMAQLLATGDQKYVTVLQQAQSLVTTASSDFGQISSTAAALLKEFPAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA