Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025007
Identifier: 238025007
GI number: 238025007
Start: 2093235
End: 2093867
Strand: Reverse
Name: 238025007
Synonym: bglu_2g16640
Alternate gene names: NA
Gene position: 2093867-2093235 (Counterclockwise)
Preceding gene: 238025008
Following gene: 238025006
Centisome position: 74.06
GC content: 72.99
Gene sequence:
>633_bases ATGGAACGGAACATGAGCAACGTGCCTGATACGGTCAACAGTCAGATCATCGATGCCAACGCCAGCATCGTTACGCTCGC CACCGGGCAGGCGCCGGCACAGGCGTTCGGCATGCTGGACGCGGTGCTGCTGGAAACGCTCGGCATCGCGATGTACAACG CGGTCAACCGGCAGCAGGGCTCCGGCATGATGAGCGCGGCCGCCGTCACGACGGCCTGCGCGAAGATGCTGAGCGTGCCG TTCGACCTCGCGCCGCCGCCGCCGCCCGCCGTCGAGCCGCCGCCGGGCGTCGAGCCGCTGCCCGGGCCGCCCGCGCCAAC CGATCCCGCCGCCATGGTGGCCGCGGCGAATGCCCAGGCCCAGGCCGCGCTGGCCACGCTGCAGACCCAGGCGCAGCTCG CGCAGCTCACGGCCACGCAGGCGCAGCAGGACATGCAGAACCTGTCGACCAAGCTGCAGGGCGGCGTGGCGTCCGCCTCC CCCTCGTCGGGCAAGTCGGGCACGTCCGGCACGTCCGGCACGCCGGCCTCGGCCGATAGCTCGGGTTCCGCGAGCGCGGC GGCGCCGCCGAGCACGTCGGCCTCGACTGGCGCCCCGGCGTCGTCGAGCACCTCGGCTTCGACCGGGTCCTAG
Upstream 100 bases:
>100_bases GCGGGCAGGTGCTGGGCGAAGCGGCGCTGGCGCAGGTGCTCGCGAAGATACTGGCGTCGGCCGCAGGCGGGCAGTCGCCG TGATGGATCAACCTCATTGA
Downstream 100 bases:
>100_bases GAAGCCGGCCGGGCCCGAACCGACAATCGTCCGGCAATGGCGAGACATGAGCGCCGGCGCCGAATTCGTCATCGCAGTGA TGCCGCGATCCGGCAGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MERNMSNVPDTVNSQIIDANASIVTLATGQAPAQAFGMLDAVLLETLGIAMYNAVNRQQGSGMMSAAAVTTACAKMLSVP FDLAPPPPPAVEPPPGVEPLPGPPAPTDPAAMVAAANAQAQAALATLQTQAQLAQLTATQAQQDMQNLSTKLQGGVASAS PSSGKSGTSGTSGTPASADSSGSASAAAPPSTSASTGAPASSSTSASTGS
Sequences:
>Translated_210_residues MERNMSNVPDTVNSQIIDANASIVTLATGQAPAQAFGMLDAVLLETLGIAMYNAVNRQQGSGMMSAAAVTTACAKMLSVP FDLAPPPPPAVEPPPGVEPLPGPPAPTDPAAMVAAANAQAQAALATLQTQAQLAQLTATQAQQDMQNLSTKLQGGVASAS PSSGKSGTSGTSGTPASADSSGSASAAAPPSTSASTGAPASSSTSASTGS >Mature_210_residues MERNMSNVPDTVNSQIIDANASIVTLATGQAPAQAFGMLDAVLLETLGIAMYNAVNRQQGSGMMSAAAVTTACAKMLSVP FDLAPPPPPAVEPPPGVEPLPGPPAPTDPAAMVAAANAQAQAALATLQTQAQLAQLTATQAQQDMQNLSTKLQGGVASAS PSSGKSGTSGTSGTPASADSSGSASAAAPPSTSASTGAPASSSTSASTGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20334; Mature: 20334
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERNMSNVPDTVNSQIIDANASIVTLATGQAPAQAFGMLDAVLLETLGIAMYNAVNRQQG CCCCCCCCCCHHCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGMMSAAAVTTACAKMLSVPFDLAPPPPPAVEPPPGVEPLPGPPAPTDPAAMVAAANAQA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHH QAALATLQTQAQLAQLTATQAQQDMQNLSTKLQGGVASASPSSGKSGTSGTSGTPASADS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SGSASAAAPPSTSASTGAPASSSTSASTGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MERNMSNVPDTVNSQIIDANASIVTLATGQAPAQAFGMLDAVLLETLGIAMYNAVNRQQG CCCCCCCCCCHHCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGMMSAAAVTTACAKMLSVPFDLAPPPPPAVEPPPGVEPLPGPPAPTDPAAMVAAANAQA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHH QAALATLQTQAQLAQLTATQAQQDMQNLSTKLQGGVASASPSSGKSGTSGTSGTPASADS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SGSASAAAPPSTSASTGAPASSSTSASTGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA