Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025005
Identifier: 238025005
GI number: 238025005
Start: 2091539
End: 2092735
Strand: Reverse
Name: 238025005
Synonym: bglu_2g16620
Alternate gene names: NA
Gene position: 2092735-2091539 (Counterclockwise)
Preceding gene: 238025006
Following gene: 238025004
Centisome position: 74.02
GC content: 71.51
Gene sequence:
>1197_bases ATGACGCTGCATATCGCTGCGAGCCAAATCCAGCAGCCCTCCCGACTTTCCGCTTCGGCGCGCTCCTGCCTGAGCCTGAT CGACGGCGGCATCCAATGGCTGCAATGGGCGATCCAGTCGCCGGCGCAGCATTTCAGGCTGCCCGACGAAACCCAGATGC TGTGCGCCGTGCAGCAGGGCCTGCATGGCGATCCGTTTTGCCTGCTGCCGGTGTCGGAGCTGCTGGTGAGCCCGGCCAAG CTGATGACCATGGGCGGCAACGACCTGCAGACGCTGACGAGCGTCGAGGCGCAGGGGACGGCCAAGCCCGACCCGGTGCT GGAAAACCAGCTGGCGAGCCTGCTGGCGCGCCATCGGCTGGTGCGCCGCGCCGACATCGCCGCGCTGCCGACCTGGCTGG GCCAGCTCGGCATCGACACCAGCCCGGTGTTCCAGTGCCTGTCGCTCGACGACGCCGTTGCGCTGGTCGAGCTGATGCGC ACCGTGCCGAGCCAACGCAGCGCCGACGCCAACGCGGCGCCGGATACGCCGGCCGAGACCCGGGCCTCGGCCGCGTTTGC CGCCGCCGAGGCGCGCACGCCGATGGAGTTCGTCGACTACATGCGCTTCCATCAGGTGCTGTCGGCCCGCAACCTCGCGG CGCAGGCGCAGACGCTGCTGCACGCCACGCTGCCCGAGCTGTTCGGCAGCCTCGAAGGGCCGCAACTGCGCGGCCTGCCG ACGCCCGACACGGTCGTGCAGGTGGTGCGCGACTGGTACGCGCAATCGCGCCAGCTCGGCTTTTCGCGGCTCTCGCTCGG CGCGCTGCGCATGGTTCAGCGCACCGGCTATCCGGGCGGCAGCGAGCCCGACGTGCGGACCGCGCTGTGGCGCTACACCA CGGCGGCGCAGATCCTGCTGTCCTCGGCCACCAGCGTTTCCGCGCGGATGGGGCAGGACGGTCGCACCTGCAGCTACGAG CTGCGCCGCGGCACGCAGGTCGCGGTGCTGTGCCTCGACAGGCACGGCGTGATCTCGCTCGACGATTTCATCGCCGACAC GTCGCCCGCCACGCAGTCCGGCGGTACGTCGGGCGCGCCGGGCGCGGCGCCGGCTTCCGGCGGCAAGCGCGCCGGCACGA GCGGCGGTGCGCAGCCGCAGACGGCTGCGTCGCCGAGCGCGGCGCTCGATGATTTCGCACTCGGGTACGCGGCATGA
Upstream 100 bases:
>100_bases TCGTCACGACCGCATCGAGCGATTTCGGCCAGATCAGCAGCACTGCGGCGGCGCTGCTCAAAGAATTCCCCGCAGGCTGA CCGACGACGGAGACGTTTCC
Downstream 100 bases:
>100_bases CTCTCTCCCTATTCCGAAAGGCCAGCATGAGCAAAACCAGTTCCGCCAGTCAGAAGCCGCCGGCATCGACGCCGGCCCCC ACGGCACCGGCTACGAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTLHIAASQIQQPSRLSASARSCLSLIDGGIQWLQWAIQSPAQHFRLPDETQMLCAVQQGLHGDPFCLLPVSELLVSPAK LMTMGGNDLQTLTSVEAQGTAKPDPVLENQLASLLARHRLVRRADIAALPTWLGQLGIDTSPVFQCLSLDDAVALVELMR TVPSQRSADANAAPDTPAETRASAAFAAAEARTPMEFVDYMRFHQVLSARNLAAQAQTLLHATLPELFGSLEGPQLRGLP TPDTVVQVVRDWYAQSRQLGFSRLSLGALRMVQRTGYPGGSEPDVRTALWRYTTAAQILLSSATSVSARMGQDGRTCSYE LRRGTQVAVLCLDRHGVISLDDFIADTSPATQSGGTSGAPGAAPASGGKRAGTSGGAQPQTAASPSAALDDFALGYAA
Sequences:
>Translated_398_residues MTLHIAASQIQQPSRLSASARSCLSLIDGGIQWLQWAIQSPAQHFRLPDETQMLCAVQQGLHGDPFCLLPVSELLVSPAK LMTMGGNDLQTLTSVEAQGTAKPDPVLENQLASLLARHRLVRRADIAALPTWLGQLGIDTSPVFQCLSLDDAVALVELMR TVPSQRSADANAAPDTPAETRASAAFAAAEARTPMEFVDYMRFHQVLSARNLAAQAQTLLHATLPELFGSLEGPQLRGLP TPDTVVQVVRDWYAQSRQLGFSRLSLGALRMVQRTGYPGGSEPDVRTALWRYTTAAQILLSSATSVSARMGQDGRTCSYE LRRGTQVAVLCLDRHGVISLDDFIADTSPATQSGGTSGAPGAAPASGGKRAGTSGGAQPQTAASPSAALDDFALGYAA >Mature_397_residues TLHIAASQIQQPSRLSASARSCLSLIDGGIQWLQWAIQSPAQHFRLPDETQMLCAVQQGLHGDPFCLLPVSELLVSPAKL MTMGGNDLQTLTSVEAQGTAKPDPVLENQLASLLARHRLVRRADIAALPTWLGQLGIDTSPVFQCLSLDDAVALVELMRT VPSQRSADANAAPDTPAETRASAAFAAAEARTPMEFVDYMRFHQVLSARNLAAQAQTLLHATLPELFGSLEGPQLRGLPT PDTVVQVVRDWYAQSRQLGFSRLSLGALRMVQRTGYPGGSEPDVRTALWRYTTAAQILLSSATSVSARMGQDGRTCSYEL RRGTQVAVLCLDRHGVISLDDFIADTSPATQSGGTSGAPGAAPASGGKRAGTSGGAQPQTAASPSAALDDFALGYAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42127; Mature: 41996
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHIAASQIQQPSRLSASARSCLSLIDGGIQWLQWAIQSPAQHFRLPDETQMLCAVQQG CEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHC LHGDPFCLLPVSELLVSPAKLMTMGGNDLQTLTSVEAQGTAKPDPVLENQLASLLARHRL CCCCCEEECCHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH VRRADIAALPTWLGQLGIDTSPVFQCLSLDDAVALVELMRTVPSQRSADANAAPDTPAET HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH RASAAFAAAEARTPMEFVDYMRFHQVLSARNLAAQAQTLLHATLPELFGSLEGPQLRGLP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TPDTVVQVVRDWYAQSRQLGFSRLSLGALRMVQRTGYPGGSEPDVRTALWRYTTAAQILL CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SSATSVSARMGQDGRTCSYELRRGTQVAVLCLDRHGVISLDDFIADTSPATQSGGTSGAP HHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEECCCCEEEHHHHHCCCCCCCCCCCCCCCC GAAPASGGKRAGTSGGAQPQTAASPSAALDDFALGYAA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TLHIAASQIQQPSRLSASARSCLSLIDGGIQWLQWAIQSPAQHFRLPDETQMLCAVQQG EEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHC LHGDPFCLLPVSELLVSPAKLMTMGGNDLQTLTSVEAQGTAKPDPVLENQLASLLARHRL CCCCCEEECCHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH VRRADIAALPTWLGQLGIDTSPVFQCLSLDDAVALVELMRTVPSQRSADANAAPDTPAET HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH RASAAFAAAEARTPMEFVDYMRFHQVLSARNLAAQAQTLLHATLPELFGSLEGPQLRGLP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TPDTVVQVVRDWYAQSRQLGFSRLSLGALRMVQRTGYPGGSEPDVRTALWRYTTAAQILL CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SSATSVSARMGQDGRTCSYELRRGTQVAVLCLDRHGVISLDDFIADTSPATQSGGTSGAP HHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEECCCCEEEHHHHHCCCCCCCCCCCCCCCC GAAPASGGKRAGTSGGAQPQTAASPSAALDDFALGYAA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA