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The map label for this gene is cirA [C]

Identifier: 238025003

GI number: 238025003

Start: 2086102

End: 2088138

Strand: Reverse

Name: cirA [C]

Synonym: bglu_2g16600

Alternate gene names: 238025003

Gene position: 2088138-2086102 (Counterclockwise)

Preceding gene: 238025004

Following gene: 238025002

Centisome position: 73.86

GC content: 70.3

Gene sequence:

>2037_bases
ATGTTCTTGGCCAGCCTCGCCCATGCGCAATCGGCCGCCGGATCCGCGGCCGCGCCGGCCATCGTCACGCCCACGCCCAC
GCTCGCGCCGGTCTTCGTGACCGCGAATCCGACCGGCGACACCGAACTGATTTCGCCTACCGCCTCGATCGGCGGCGACG
CGCTCGCGCAGCGCCGCGCGAATTCGCTCGGCGCGACGCTCGACGGCCTGCCCGGCGTGTCCACCACGACCTACGGGCCG
ATGGTGGGGCGCCCGATCATCCGCGGCATGGACGGCGACCGGATCCGGCTGTTGCAGAACGGCGTCGCGTCCTACGATGC
CTCGTCGCTGTCCTACGACCACGCGGTGCCGCAGAATCCGCTGTCGATCGAGCGCGTCGAGATCGTGCGCGGGCCGGCCG
CGCTGCTCTACGGCGGCAACGCGATCGGCGGCGTGGTCAACACCATCGACAACCGGATTCCGCGCGAAGCGCTGACGGGC
GTGTCGGGTGCCGCCGATGCCAGCTACGGCGGTGCGAACGACGCTCGGGCGGGCGCGGCGCTGGTGGAAGGCGGCAACGG
CCGCTTCGCGTTCCATGTCGACGCGTTCGACGACGAGGCCGGCAAGCTGCGGATTCCCGGCTTCGCGCGCTCGGCTCGGC
TGCGCGCGCTCGACGGCCCCGACGTCGCGCAGCCCTCGGGCAGCCTGCCGAACAGCGACGGCCGCTCGCACGGCGGCGCG
GCGGGTGGCTCGTACACCTGGGCGGACGGCTATGCGGGCCTGTCGTACAGCGGCTTCGAGTCGAACTATGGCTCGGTGGC
CGAGAGCGACGTGCGCCTGCGCATGCGCCAGCAGCGGCTGGCCGCGTCGTCCGAGATCCGCAACCTTGCCGGGCCGATCT
CGCGGCTGAGATTCGACTTCGGCTACAGCGACTACCAGCACAAGGAAATCGATGACGGCCAGACCGCCACCACGTTCCGC
AATCACGGCTACGAGTTCCGTGCCGAGGCGCGCCATCGCAAAGTCGGGCCGTTCGAGGGCGCGTTCGGCGTGCAGGCCTC
GCAGAACACGTTCTCGGCGCTCGGCGACGAGGCACTCGTGCCCACCACGCAGACCACCAATGTCGCGCTGTTCGGCCTCG
AGCAGTGGCAGGCCACGCAGGCGCTGAAGCTGAGCCTGGGCGGCCGCCTCGAGCACGTGAAAATCGATCCGACGCCGGGC
GGCAACGCGCGCTTCGCCGGTGCCGAAGCGCGCGGCTTCACCGCCGGCAGCGCATCGTTCGGCGCGCTCTACAAGCTCGC
TCCGCTCTGGTCGGTGGCGGGCAGCGTGTCGTACACCGAACGCGCGCCCACCTTCTACGAGCTCTACGCGAACGGCCCGC
ACGACGCGACCGGCCAGTACCTGATCGGCAATTCGTCGGCGCGCAAAGAAAAGGCCGTCTCCACCGATCTCTCGCTGCGC
TACGCGAGCGGGCCGAACAAGGGCAGCATCGGCGTGTTCTATACGCGCTTTTCGAACTACCTGACCGAATTCGACACCGG
CCGGCTCGTCGACGACGAGGGCGAGCCGGTCGCGCCGGGCACCGGCGACGCGCTCGATGAAGCCGTCTACCGCGGCGTGC
GCGCCGAGTTCTATGGCTTCGAATCGAGCGGCAAGTGGCGCGTGTTCGAAAAGGGCGCCCACACGCTCGATCTCGAGCTG
GCCGGTGACTACACGCATGCGCGCAATGCCGAGACGGGCGAGCCGCTGCCGCGCATCTCGCCGCTGCGCGCGACGCTCGC
GGCCGACTACGGCTATGGCCCGTTCGGTGCGCGCGCGCAGCTCACGCACGCCTGGTCACAGCACCGCGTGCCCGAGAACG
ATCTGGCCACCAGCGGCTACACCTCGCTCGGCGTGGTGCTGACCTACCGCTTCCACGTCGGCGCCACGCGCTGGCTCGCC
TACCTGCGCGGCGACAACCTCGGCAATCAGGACATCCGGCTCGCCAGTTCGGTGGTGCGCGATTTCGCGCCGGAAGGCGG
GCGCAGCGTGATGGCGGGCCTGCGCACCACGTTCTGA

Upstream 100 bases:

>100_bases
ATCCCGCCTTTCGCCCCGCTCCGCCTCGCGGGTTTCGCCCCGGAGCCGGTCCTGCCTGCCGCCTTGCCGCGCCGCGCGCG
GGCTGCCGCCGCTGACGCTG

Downstream 100 bases:

>100_bases
CGCGACCGCGGGCGGCTGGCCCGCTGGCGGGGATTCGCGCGGCGCCGCGCAGGTCGTGCCGGCACGGCGCCGCAAGTTCG
GTAAGATGGCACGCGCAGAA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MFLASLAHAQSAAGSAAAPAIVTPTPTLAPVFVTANPTGDTELISPTASIGGDALAQRRANSLGATLDGLPGVSTTTYGP
MVGRPIIRGMDGDRIRLLQNGVASYDASSLSYDHAVPQNPLSIERVEIVRGPAALLYGGNAIGGVVNTIDNRIPREALTG
VSGAADASYGGANDARAGAALVEGGNGRFAFHVDAFDDEAGKLRIPGFARSARLRALDGPDVAQPSGSLPNSDGRSHGGA
AGGSYTWADGYAGLSYSGFESNYGSVAESDVRLRMRQQRLAASSEIRNLAGPISRLRFDFGYSDYQHKEIDDGQTATTFR
NHGYEFRAEARHRKVGPFEGAFGVQASQNTFSALGDEALVPTTQTTNVALFGLEQWQATQALKLSLGGRLEHVKIDPTPG
GNARFAGAEARGFTAGSASFGALYKLAPLWSVAGSVSYTERAPTFYELYANGPHDATGQYLIGNSSARKEKAVSTDLSLR
YASGPNKGSIGVFYTRFSNYLTEFDTGRLVDDEGEPVAPGTGDALDEAVYRGVRAEFYGFESSGKWRVFEKGAHTLDLEL
AGDYTHARNAETGEPLPRISPLRATLAADYGYGPFGARAQLTHAWSQHRVPENDLATSGYTSLGVVLTYRFHVGATRWLA
YLRGDNLGNQDIRLASSVVRDFAPEGGRSVMAGLRTTF

Sequences:

>Translated_678_residues
MFLASLAHAQSAAGSAAAPAIVTPTPTLAPVFVTANPTGDTELISPTASIGGDALAQRRANSLGATLDGLPGVSTTTYGP
MVGRPIIRGMDGDRIRLLQNGVASYDASSLSYDHAVPQNPLSIERVEIVRGPAALLYGGNAIGGVVNTIDNRIPREALTG
VSGAADASYGGANDARAGAALVEGGNGRFAFHVDAFDDEAGKLRIPGFARSARLRALDGPDVAQPSGSLPNSDGRSHGGA
AGGSYTWADGYAGLSYSGFESNYGSVAESDVRLRMRQQRLAASSEIRNLAGPISRLRFDFGYSDYQHKEIDDGQTATTFR
NHGYEFRAEARHRKVGPFEGAFGVQASQNTFSALGDEALVPTTQTTNVALFGLEQWQATQALKLSLGGRLEHVKIDPTPG
GNARFAGAEARGFTAGSASFGALYKLAPLWSVAGSVSYTERAPTFYELYANGPHDATGQYLIGNSSARKEKAVSTDLSLR
YASGPNKGSIGVFYTRFSNYLTEFDTGRLVDDEGEPVAPGTGDALDEAVYRGVRAEFYGFESSGKWRVFEKGAHTLDLEL
AGDYTHARNAETGEPLPRISPLRATLAADYGYGPFGARAQLTHAWSQHRVPENDLATSGYTSLGVVLTYRFHVGATRWLA
YLRGDNLGNQDIRLASSVVRDFAPEGGRSVMAGLRTTF
>Mature_678_residues
MFLASLAHAQSAAGSAAAPAIVTPTPTLAPVFVTANPTGDTELISPTASIGGDALAQRRANSLGATLDGLPGVSTTTYGP
MVGRPIIRGMDGDRIRLLQNGVASYDASSLSYDHAVPQNPLSIERVEIVRGPAALLYGGNAIGGVVNTIDNRIPREALTG
VSGAADASYGGANDARAGAALVEGGNGRFAFHVDAFDDEAGKLRIPGFARSARLRALDGPDVAQPSGSLPNSDGRSHGGA
AGGSYTWADGYAGLSYSGFESNYGSVAESDVRLRMRQQRLAASSEIRNLAGPISRLRFDFGYSDYQHKEIDDGQTATTFR
NHGYEFRAEARHRKVGPFEGAFGVQASQNTFSALGDEALVPTTQTTNVALFGLEQWQATQALKLSLGGRLEHVKIDPTPG
GNARFAGAEARGFTAGSASFGALYKLAPLWSVAGSVSYTERAPTFYELYANGPHDATGQYLIGNSSARKEKAVSTDLSLR
YASGPNKGSIGVFYTRFSNYLTEFDTGRLVDDEGEPVAPGTGDALDEAVYRGVRAEFYGFESSGKWRVFEKGAHTLDLEL
AGDYTHARNAETGEPLPRISPLRATLAADYGYGPFGARAQLTHAWSQHRVPENDLATSGYTSLGVVLTYRFHVGATRWLA
YLRGDNLGNQDIRLASSVVRDFAPEGGRSVMAGLRTTF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 71765; Mature: 71765

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLASLAHAQSAAGSAAAPAIVTPTPTLAPVFVTANPTGDTELISPTASIGGDALAQRRA
CCHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEECCCCCCEEECCCHHCCHHHHHHHHH
NSLGATLDGLPGVSTTTYGPMVGRPIIRGMDGDRIRLLQNGVASYDASSLSYDHAVPQNP
HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEHHHHCCCHHCCCCCCCCCCCCCCCC
LSIERVEIVRGPAALLYGGNAIGGVVNTIDNRIPREALTGVSGAADASYGGANDARAGAA
CCEEEEEEECCCEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEE
LVEGGNGRFAFHVDAFDDEAGKLRIPGFARSARLRALDGPDVAQPSGSLPNSDGRSHGGA
EEECCCCEEEEEEECCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
AGGSYTWADGYAGLSYSGFESNYGSVAESDVRLRMRQQRLAASSEIRNLAGPISRLRFDF
CCCCCEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
GYSDYQHKEIDDGQTATTFRNHGYEFRAEARHRKVGPFEGAFGVQASQNTFSALGDEALV
CCCCCCCCCCCCCCCCHHHHHCCEEEEECHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
PTTQTTNVALFGLEQWQATQALKLSLGGRLEHVKIDPTPGGNARFAGAEARGFTAGSASF
CCCCCCCEEEEECHHHHHHHHEEEECCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCH
GALYKLAPLWSVAGSVSYTERAPTFYELYANGPHDATGQYLIGNSSARKEKAVSTDLSLR
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHCCCCEEE
YASGPNKGSIGVFYTRFSNYLTEFDTGRLVDDEGEPVAPGTGDALDEAVYRGVRAEFYGF
ECCCCCCCCEEEEEEHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHCCHHEEEEE
ESSGKWRVFEKGAHTLDLELAGDYTHARNAETGEPLPRISPLRATLAADYGYGPFGARAQ
CCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHH
LTHAWSQHRVPENDLATSGYTSLGVVLTYRFHVGATRWLAYLRGDNLGNQDIRLASSVVR
HHHHHHHCCCCCHHCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH
DFAPEGGRSVMAGLRTTF
HHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MFLASLAHAQSAAGSAAAPAIVTPTPTLAPVFVTANPTGDTELISPTASIGGDALAQRRA
CCHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEECCCCCCEEECCCHHCCHHHHHHHHH
NSLGATLDGLPGVSTTTYGPMVGRPIIRGMDGDRIRLLQNGVASYDASSLSYDHAVPQNP
HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEHHHHCCCHHCCCCCCCCCCCCCCCC
LSIERVEIVRGPAALLYGGNAIGGVVNTIDNRIPREALTGVSGAADASYGGANDARAGAA
CCEEEEEEECCCEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCEE
LVEGGNGRFAFHVDAFDDEAGKLRIPGFARSARLRALDGPDVAQPSGSLPNSDGRSHGGA
EEECCCCEEEEEEECCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
AGGSYTWADGYAGLSYSGFESNYGSVAESDVRLRMRQQRLAASSEIRNLAGPISRLRFDF
CCCCCEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
GYSDYQHKEIDDGQTATTFRNHGYEFRAEARHRKVGPFEGAFGVQASQNTFSALGDEALV
CCCCCCCCCCCCCCCCHHHHHCCEEEEECHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
PTTQTTNVALFGLEQWQATQALKLSLGGRLEHVKIDPTPGGNARFAGAEARGFTAGSASF
CCCCCCCEEEEECHHHHHHHHEEEECCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCH
GALYKLAPLWSVAGSVSYTERAPTFYELYANGPHDATGQYLIGNSSARKEKAVSTDLSLR
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHCCCCEEE
YASGPNKGSIGVFYTRFSNYLTEFDTGRLVDDEGEPVAPGTGDALDEAVYRGVRAEFYGF
ECCCCCCCCEEEEEEHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHCCHHEEEEE
ESSGKWRVFEKGAHTLDLELAGDYTHARNAETGEPLPRISPLRATLAADYGYGPFGARAQ
CCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHH
LTHAWSQHRVPENDLATSGYTSLGVVLTYRFHVGATRWLAYLRGDNLGNQDIRLASSVVR
HHHHHHHCCCCCHHCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH
DFAPEGGRSVMAGLRTTF
HHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]