Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is 238025002

Identifier: 238025002

GI number: 238025002

Start: 2085446

End: 2085868

Strand: Reverse

Name: 238025002

Synonym: bglu_2g16590

Alternate gene names: NA

Gene position: 2085868-2085446 (Counterclockwise)

Preceding gene: 238025003

Following gene: 238024998

Centisome position: 73.78

GC content: 67.61

Gene sequence:

>423_bases
ATGCGCGCCTGCCTGGGTACCTGCCTGAGCGCCGTGCTGCTGGGCGTGGCCGGCGCGAGCCTGGCCGCGCCGCTCTGCCA
GACGCAGACGCAGGGCAGCCACACCTCGAAGCTCTGCATCGAGCAGACGCCGTTCAAGCACGACTACTACACGCTCTGGG
TGGACGACGCGCCCGTCTTCATGCTGCCCGACGACTACGTCGAGAACGTCTCGCTCACGCACACCGTGCCCGAGGACGAT
TCGAACGAGTTTCCGCTGTCGAAGCAGGGCATGCACAGCGTGGCGATCACGGGCGGCTGCCGTCCGCTCGTCGAATTGCA
GGGCGCTGGCAGCGCCGCGGTCAGCGTGGAGACGGGGCGCGTCTGCTCGTTCGTCTGGGGCCAGCAGGCGCTGGTGAAGG
ACATGCGCTTCCGGTTCGAATAA

Upstream 100 bases:

>100_bases
TCGGCTCGCGAGCGCACCGGCGGCCATGCCGGATCACTGTTCCTCCGCCTTATCTTCCGGGATCGATATGACGAGACGAA
GCACGACGGGACGACGCGCG

Downstream 100 bases:

>100_bases
TGCGCCCGGACGGCCGGCCGCCTGTCGCGCCTTCGCGCGTGGCGGGTGCGGCGGGCCGTTCGTTCGACAGGCCGTGCGCA
CGGCCGCGCAGGCGCCACGG

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVFMLPDDYVENVSLTHTVPEDD
SNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGRVCSFVWGQQALVKDMRFRFE

Sequences:

>Translated_140_residues
MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVFMLPDDYVENVSLTHTVPEDD
SNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGRVCSFVWGQQALVKDMRFRFE
>Mature_140_residues
MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVFMLPDDYVENVSLTHTVPEDD
SNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGRVCSFVWGQQALVKDMRFRFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15154; Mature: 15154

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVF
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEE
MLPDDYVENVSLTHTVPEDDSNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGR
ECCHHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC
VCSFVWGQQALVKDMRFRFE
EEEHHHCHHHHHHHHHHCCC
>Mature Secondary Structure
MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVF
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEE
MLPDDYVENVSLTHTVPEDDSNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGR
ECCHHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC
VCSFVWGQQALVKDMRFRFE
EEEHHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA