Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025002
Identifier: 238025002
GI number: 238025002
Start: 2085446
End: 2085868
Strand: Reverse
Name: 238025002
Synonym: bglu_2g16590
Alternate gene names: NA
Gene position: 2085868-2085446 (Counterclockwise)
Preceding gene: 238025003
Following gene: 238024998
Centisome position: 73.78
GC content: 67.61
Gene sequence:
>423_bases ATGCGCGCCTGCCTGGGTACCTGCCTGAGCGCCGTGCTGCTGGGCGTGGCCGGCGCGAGCCTGGCCGCGCCGCTCTGCCA GACGCAGACGCAGGGCAGCCACACCTCGAAGCTCTGCATCGAGCAGACGCCGTTCAAGCACGACTACTACACGCTCTGGG TGGACGACGCGCCCGTCTTCATGCTGCCCGACGACTACGTCGAGAACGTCTCGCTCACGCACACCGTGCCCGAGGACGAT TCGAACGAGTTTCCGCTGTCGAAGCAGGGCATGCACAGCGTGGCGATCACGGGCGGCTGCCGTCCGCTCGTCGAATTGCA GGGCGCTGGCAGCGCCGCGGTCAGCGTGGAGACGGGGCGCGTCTGCTCGTTCGTCTGGGGCCAGCAGGCGCTGGTGAAGG ACATGCGCTTCCGGTTCGAATAA
Upstream 100 bases:
>100_bases TCGGCTCGCGAGCGCACCGGCGGCCATGCCGGATCACTGTTCCTCCGCCTTATCTTCCGGGATCGATATGACGAGACGAA GCACGACGGGACGACGCGCG
Downstream 100 bases:
>100_bases TGCGCCCGGACGGCCGGCCGCCTGTCGCGCCTTCGCGCGTGGCGGGTGCGGCGGGCCGTTCGTTCGACAGGCCGTGCGCA CGGCCGCGCAGGCGCCACGG
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVFMLPDDYVENVSLTHTVPEDD SNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGRVCSFVWGQQALVKDMRFRFE
Sequences:
>Translated_140_residues MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVFMLPDDYVENVSLTHTVPEDD SNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGRVCSFVWGQQALVKDMRFRFE >Mature_140_residues MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVFMLPDDYVENVSLTHTVPEDD SNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGRVCSFVWGQQALVKDMRFRFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15154; Mature: 15154
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVF CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEE MLPDDYVENVSLTHTVPEDDSNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGR ECCHHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC VCSFVWGQQALVKDMRFRFE EEEHHHCHHHHHHHHHHCCC >Mature Secondary Structure MRACLGTCLSAVLLGVAGASLAAPLCQTQTQGSHTSKLCIEQTPFKHDYYTLWVDDAPVF CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEE MLPDDYVENVSLTHTVPEDDSNEFPLSKQGMHSVAITGGCRPLVELQGAGSAAVSVETGR ECCHHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC VCSFVWGQQALVKDMRFRFE EEEHHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA