| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is msrA2 [H]
Identifier: 238024896
GI number: 238024896
Start: 1948953
End: 1949717
Strand: Direct
Name: msrA2 [H]
Synonym: bglu_2g15390
Alternate gene names: 238024896
Gene position: 1948953-1949717 (Clockwise)
Preceding gene: 238024895
Following gene: 238024899
Centisome position: 68.93
GC content: 72.55
Gene sequence:
>765_bases ATGAAGCCGATTCGACACGATCTTGCCCCCTGCCCGCGCCGCCGCGCGTCGCGCGCCGGCCTGCTCATGCGCCTGGCCGG CGGCGCCGCCGCGCTCGGCGCGCTCGCCGCGGTGCTGCTCGGCTGGCAGCCGGCCGCGCTGGCCGACGCGGCCAGGCCGC TGCCCGCGCCCGTGCTCGACGAAACACCGGGCGCCACGCGCACCGAGACGGCCGTGTTCTCGGGCGGCTGCTTCTGGGGC GTGCAGGGCGTGTTCGAGCACGTGGCCGGCGTCGAGCAGGTCGCCGCCGGCTACGCGGGCGGCGCGGCCTCGACGGCGCA GTACGAGGCCGTCAGCGAGGGCGACACCGGCCACGCGGAATCGGTGCGGGTGGTCTACGATCCGAGCCGGATCACCTACG GGCGGCTGCTGCAGATCTTCTTCTCGGTCGCGCACGATCCGACCGAACTGAACCGCCAGGGCCCCGACACCGGCACCCAG TACCGCTCGGCGATCTTCCCCGTCGACGCGCAGCAGAAGGCGATCGCGCTCGCCTACATCCGGCAGTTGACCGACGCCCA CGCGTTCCCGGCGCCGATCGTGACGAGCATCGAAGCCGGCCAGCGCTTCTATCCGGCCGAGGCCTACCATCAGGATTTCC TGGTGCGCCACCCCGCCTACCCGTACATCGTGATCAACGACCTGCCGAAGGTGGCCGCGCTGAAGGCCGGCTACCCGAAG CTGTACGTCGACACGCCGGTGCGGTACGCGCCGGACGGCAACTGA
Upstream 100 bases:
>100_bases TTCTCGATCGAATTCCTCGACCCCGGCGTGCAGGCATTCGCGTTCACGTTCGGTTGAACCCGCATCATCCGATCTCCGAC TTGCGCAAGGAACCCACATC
Downstream 100 bases:
>100_bases GGCGCGCGGCGGCCGCGCCCGTCGCGCGATCGATCGGCCCCCGCCGCCGCGGCACGCCGCGTTGCGCGCGCCGGCGGTTC GAGGGCGCGGCGCCTGCCGT
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKPIRHDLAPCPRRRASRAGLLMRLAGGAAALGALAAVLLGWQPAALADAARPLPAPVLDETPGATRTETAVFSGGCFWG VQGVFEHVAGVEQVAAGYAGGAASTAQYEAVSEGDTGHAESVRVVYDPSRITYGRLLQIFFSVAHDPTELNRQGPDTGTQ YRSAIFPVDAQQKAIALAYIRQLTDAHAFPAPIVTSIEAGQRFYPAEAYHQDFLVRHPAYPYIVINDLPKVAALKAGYPK LYVDTPVRYAPDGN
Sequences:
>Translated_254_residues MKPIRHDLAPCPRRRASRAGLLMRLAGGAAALGALAAVLLGWQPAALADAARPLPAPVLDETPGATRTETAVFSGGCFWG VQGVFEHVAGVEQVAAGYAGGAASTAQYEAVSEGDTGHAESVRVVYDPSRITYGRLLQIFFSVAHDPTELNRQGPDTGTQ YRSAIFPVDAQQKAIALAYIRQLTDAHAFPAPIVTSIEAGQRFYPAEAYHQDFLVRHPAYPYIVINDLPKVAALKAGYPK LYVDTPVRYAPDGN >Mature_254_residues MKPIRHDLAPCPRRRASRAGLLMRLAGGAAALGALAAVLLGWQPAALADAARPLPAPVLDETPGATRTETAVFSGGCFWG VQGVFEHVAGVEQVAAGYAGGAASTAQYEAVSEGDTGHAESVRVVYDPSRITYGRLLQIFFSVAHDPTELNRQGPDTGTQ YRSAIFPVDAQQKAIALAYIRQLTDAHAFPAPIVTSIEAGQRFYPAEAYHQDFLVRHPAYPYIVINDLPKVAALKAGYPK LYVDTPVRYAPDGN
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=155, Percent_Identity=47.0967741935484, Blast_Score=135, Evalue=3e-32, Organism=Homo sapiens, GI208609995, Length=155, Percent_Identity=47.0967741935484, Blast_Score=134, Evalue=5e-32, Organism=Homo sapiens, GI208609993, Length=108, Percent_Identity=50, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1790665, Length=187, Percent_Identity=42.7807486631016, Blast_Score=135, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17533973, Length=160, Percent_Identity=32.5, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320881, Length=161, Percent_Identity=37.2670807453416, Blast_Score=95, Evalue=1e-20, Organism=Drosophila melanogaster, GI24664627, Length=150, Percent_Identity=35.3333333333333, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24664631, Length=150, Percent_Identity=34.6666666666667, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI45553131, Length=144, Percent_Identity=34.7222222222222, Blast_Score=78, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 27126; Mature: 27126
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIRHDLAPCPRRRASRAGLLMRLAGGAAALGALAAVLLGWQPAALADAARPLPAPVLD CCCHHHHCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC ETPGATRTETAVFSGGCFWGVQGVFEHVAGVEQVAAGYAGGAASTAQYEAVSEGDTGHAE CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCC SVRVVYDPSRITYGRLLQIFFSVAHDPTELNRQGPDTGTQYRSAIFPVDAQQKAIALAYI CEEEEECCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHEECCCCCHHHHHHHHHH RQLTDAHAFPAPIVTSIEAGQRFYPAEAYHQDFLVRHPAYPYIVINDLPKVAALKAGYPK HHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCE LYVDTPVRYAPDGN EEEECCEEECCCCC >Mature Secondary Structure MKPIRHDLAPCPRRRASRAGLLMRLAGGAAALGALAAVLLGWQPAALADAARPLPAPVLD CCCHHHHCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC ETPGATRTETAVFSGGCFWGVQGVFEHVAGVEQVAAGYAGGAASTAQYEAVSEGDTGHAE CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCC SVRVVYDPSRITYGRLLQIFFSVAHDPTELNRQGPDTGTQYRSAIFPVDAQQKAIALAYI CEEEEECCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHEECCCCCHHHHHHHHHH RQLTDAHAFPAPIVTSIEAGQRFYPAEAYHQDFLVRHPAYPYIVINDLPKVAALKAGYPK HHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCE LYVDTPVRYAPDGN EEEECCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]