| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is dipZ [H]
Identifier: 238024895
GI number: 238024895
Start: 1946873
End: 1948909
Strand: Direct
Name: dipZ [H]
Synonym: bglu_2g15380
Alternate gene names: 238024895
Gene position: 1946873-1948909 (Clockwise)
Preceding gene: 238024894
Following gene: 238024896
Centisome position: 68.86
GC content: 73.34
Gene sequence:
>2037_bases ATGTTGCTTGTGATCCTCGCCTATCTCGGCGGCGTGCTCACCATCGTGAGCCCCTGCATCCTGCCGGTGCTGCCCTTCGT GTTCGCCCGCGCGGACCGCCCGTTCGTGCGCAACGGCCTGCCGCTGCTGGCCGGCATGGCCGTGACGTTCGCCGCCGTCG CGACGCTGGCCGCCGTCGGCGGCGGCTGGATCGCGCAGGCCAATCAGGCCGGCCGCTGGCTCGCGATCGCGATGGTCGGC GTGTTCGGCCTGACGCTGCTGTTGCCGAGCCTCGCCGAACACATGACGCGCCCGCTGGTGGCGCTCGGCAACCGGCTGAC CGGCGTGGCCTCGACGGCCGACGGCGAGGGCCGCAGCAGCATCGGCGCGTCGCTGTTGATCGGCGTGGCCACCGGCCTGC TGTGGGCACCGTGCGCCGGCCCGATCCTCGGGCTCGTGCTGACCGGCGCCGCGCTGCGCGGCGCGAGCGTGGGCACCACG CTGCTGCTGGTGGCCTACGCGGCCGGCGCGGCCACCTCGCTGGCCGCCGCGCTGCTGGTGGGCGGCAGGCTGTTCGCGGC GATGAAGCGCTCGCTCGGCGCCGGCGAATGGATCCGCCGCGGGCTCGGCGCGGCGATGCTGGCCGGCGTGGGCGCGATCG CGCTCGGCCTCGACACCGGCGTGCTCGCGCAGGTCTCGACGATCGCCACGGGCGGCCTGGAGCAATCGCTCGTCAATCGC TTCGCGCCGCGCGGCAATGCCATGCACGGCGCCGCGGGCGGCGCCGTGGCGAACGCGAACGGCCCGGCCATGACAGCAAG CAGCGCGGCGGCCGGCGACGGCCCGGCGATGATGGCAGCGGGCGATGCGATGCGTGCCGCCGCCAACGGCGCGGGCAACC ACGCAGCCGCCGGTAGCGGCCCGGCGATGATGGCCGCAGGCGACGCCATGCGCGCCGCCGCCAACGGCGCGGGCGCCGAC GCAGCCGCCGGCACCGCCCCCGCCGCGAACGCGCTGATGTCCGCGGCCACCCGCGCCGCGCGCCGCGACGCGTCGATGCT GCGCGTCTCGGCCCCGGCGCTGCCCGTGGAAGGCACGCTGCCGCCGCTGTCGGGCGCAACCAAGTGGCTCAATTCGCCGC CGCTCACCAACGCCTCGCTGCGCGGCAAGGTGGTGCTGATCGACTTCTGGACCTACTCGTGCATCAACTGCCTGCGCACG CTGCCCTACGTGAAGGCCTGGGCGCGCAAGTACAAGAACGACGGCCTGGTGGTGATCGGCGTCCACGCGCCCGAATTCGC GTTCGAACGCGACCCCGGCAACGTGAAGCAGGCCACCCGTGATCTCGGCGTCACCTATCCGGTGGCGATCGACAACGGCT ACGCGATCTGGCGCGCGTTCAACAACGAATACTGGCCGGCGCACTACTTCGTCGACGCGCAGGGCCGCATCCGCTATCAC CACTTCGGCGAGGGCGACTATCTGCAATCGGAACGCGCGATCCAGCAACTGCTCGTCGAGGCCGGCCATCCCGACGCGGC CCAGGTGCCGGTCGGCATCGACGGCCCGGCGGCGAGCGGCGCCCAGGCCGCCGCGGACGACACCGACATGCGTTCGCCGG AAACCTACGTAGGCTACGCGCGCGCCGAGCATTTCGCCTCGCCGGGCGGCCAGTTGCACGACAGCGAGCACGACTATGCG GCGCCCGCCCAACCGGGCCTCGGCCAGTGGGGGCTGGCCGGTAGCTGGAAGGTGGGCGGCGAGCAGGCCACGCTCGTCAA ACCGGGCGGCCGGATCGTCTACCGCTTCCATGCGCGCGACCTGCATCTGGTGCTCGGCCCGGGCGGCGGCGGCGCGCCGG TGCGATTCCGCGTGACGCTGGACGGCAGCGCGCCGGGCGCCTCGCACGGCGCCGACGTGGGCGCCGACGGCACCGGCACC GTGGCCGGCCAGCGCCTTTATCAACTGATCCGGCAGCGCGGCCCGATCGCCGATCATACGTTCTCGATCGAATTCCTCGA CCCCGGCGTGCAGGCATTCGCGTTCACGTTCGGTTGA
Upstream 100 bases:
>100_bases CTGCGCTACTGCATGAACGGCACGGCGATGACGTTCAGCCCGTCGTCGGCCTGAGCCCGCCCCACCATCTTCCTGCAAGA ATTCCTACCAGGACTTCGCC
Downstream 100 bases:
>100_bases ACCCGCATCATCCGATCTCCGACTTGCGCAAGGAACCCACATCATGAAGCCGATTCGACACGATCTTGCCCCCTGCCCGC GCCGCCGCGCGTCGCGCGCC
Product: putative cytochrome c biogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MLLVILAYLGGVLTIVSPCILPVLPFVFARADRPFVRNGLPLLAGMAVTFAAVATLAAVGGGWIAQANQAGRWLAIAMVG VFGLTLLLPSLAEHMTRPLVALGNRLTGVASTADGEGRSSIGASLLIGVATGLLWAPCAGPILGLVLTGAALRGASVGTT LLLVAYAAGAATSLAAALLVGGRLFAAMKRSLGAGEWIRRGLGAAMLAGVGAIALGLDTGVLAQVSTIATGGLEQSLVNR FAPRGNAMHGAAGGAVANANGPAMTASSAAAGDGPAMMAAGDAMRAAANGAGNHAAAGSGPAMMAAGDAMRAAANGAGAD AAAGTAPAANALMSAATRAARRDASMLRVSAPALPVEGTLPPLSGATKWLNSPPLTNASLRGKVVLIDFWTYSCINCLRT LPYVKAWARKYKNDGLVVIGVHAPEFAFERDPGNVKQATRDLGVTYPVAIDNGYAIWRAFNNEYWPAHYFVDAQGRIRYH HFGEGDYLQSERAIQQLLVEAGHPDAAQVPVGIDGPAASGAQAAADDTDMRSPETYVGYARAEHFASPGGQLHDSEHDYA APAQPGLGQWGLAGSWKVGGEQATLVKPGGRIVYRFHARDLHLVLGPGGGGAPVRFRVTLDGSAPGASHGADVGADGTGT VAGQRLYQLIRQRGPIADHTFSIEFLDPGVQAFAFTFG
Sequences:
>Translated_678_residues MLLVILAYLGGVLTIVSPCILPVLPFVFARADRPFVRNGLPLLAGMAVTFAAVATLAAVGGGWIAQANQAGRWLAIAMVG VFGLTLLLPSLAEHMTRPLVALGNRLTGVASTADGEGRSSIGASLLIGVATGLLWAPCAGPILGLVLTGAALRGASVGTT LLLVAYAAGAATSLAAALLVGGRLFAAMKRSLGAGEWIRRGLGAAMLAGVGAIALGLDTGVLAQVSTIATGGLEQSLVNR FAPRGNAMHGAAGGAVANANGPAMTASSAAAGDGPAMMAAGDAMRAAANGAGNHAAAGSGPAMMAAGDAMRAAANGAGAD AAAGTAPAANALMSAATRAARRDASMLRVSAPALPVEGTLPPLSGATKWLNSPPLTNASLRGKVVLIDFWTYSCINCLRT LPYVKAWARKYKNDGLVVIGVHAPEFAFERDPGNVKQATRDLGVTYPVAIDNGYAIWRAFNNEYWPAHYFVDAQGRIRYH HFGEGDYLQSERAIQQLLVEAGHPDAAQVPVGIDGPAASGAQAAADDTDMRSPETYVGYARAEHFASPGGQLHDSEHDYA APAQPGLGQWGLAGSWKVGGEQATLVKPGGRIVYRFHARDLHLVLGPGGGGAPVRFRVTLDGSAPGASHGADVGADGTGT VAGQRLYQLIRQRGPIADHTFSIEFLDPGVQAFAFTFG >Mature_678_residues MLLVILAYLGGVLTIVSPCILPVLPFVFARADRPFVRNGLPLLAGMAVTFAAVATLAAVGGGWIAQANQAGRWLAIAMVG VFGLTLLLPSLAEHMTRPLVALGNRLTGVASTADGEGRSSIGASLLIGVATGLLWAPCAGPILGLVLTGAALRGASVGTT LLLVAYAAGAATSLAAALLVGGRLFAAMKRSLGAGEWIRRGLGAAMLAGVGAIALGLDTGVLAQVSTIATGGLEQSLVNR FAPRGNAMHGAAGGAVANANGPAMTASSAAAGDGPAMMAAGDAMRAAANGAGNHAAAGSGPAMMAAGDAMRAAANGAGAD AAAGTAPAANALMSAATRAARRDASMLRVSAPALPVEGTLPPLSGATKWLNSPPLTNASLRGKVVLIDFWTYSCINCLRT LPYVKAWARKYKNDGLVVIGVHAPEFAFERDPGNVKQATRDLGVTYPVAIDNGYAIWRAFNNEYWPAHYFVDAQGRIRYH HFGEGDYLQSERAIQQLLVEAGHPDAAQVPVGIDGPAASGAQAAADDTDMRSPETYVGYARAEHFASPGGQLHDSEHDYA APAQPGLGQWGLAGSWKVGGEQATLVKPGGRIVYRFHARDLHLVLGPGGGGAPVRFRVTLDGSAPGASHGADVGADGTGT VAGQRLYQLIRQRGPIADHTFSIEFLDPGVQAFAFTFG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=181, Percent_Identity=30.3867403314917, Blast_Score=92, Evalue=2e-18, Organism=Drosophila melanogaster, GI116007528, Length=127, Percent_Identity=35.4330708661417, Blast_Score=89, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: NA
Molecular weight: Translated: 69015; Mature: 69015
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVILAYLGGVLTIVSPCILPVLPFVFARADRPFVRNGLPLLAGMAVTFAAVATLAAVG CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHC GGWIAQANQAGRWLAIAMVGVFGLTLLLPSLAEHMTRPLVALGNRLTGVASTADGEGRSS CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCHH IGASLLIGVATGLLWAPCAGPILGLVLTGAALRGASVGTTLLLVAYAAGAATSLAAALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GGRLFAAMKRSLGAGEWIRRGLGAAMLAGVGAIALGLDTGVLAQVSTIATGGLEQSLVNR HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHHHHHHH FAPRGNAMHGAAGGAVANANGPAMTASSAAAGDGPAMMAAGDAMRAAANGAGNHAAAGSG HCCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCC PAMMAAGDAMRAAANGAGADAAAGTAPAANALMSAATRAARRDASMLRVSAPALPVEGTL CCEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCC PPLSGATKWLNSPPLTNASLRGKVVLIDFWTYSCINCLRTLPYVKAWARKYKNDGLVVIG CCCCCHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VHAPEFAFERDPGNVKQATRDLGVTYPVAIDNGYAIWRAFNNEYWPAHYFVDAQGRIRYH ECCCCCCEECCCCHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCEEEEECCCCEEEEE HFGEGDYLQSERAIQQLLVEAGHPDAAQVPVGIDGPAASGAQAAADDTDMRSPETYVGYA ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RAEHFASPGGQLHDSEHDYAAPAQPGLGQWGLAGSWKVGGEQATLVKPGGRIVYRFHARD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECCE LHLVLGPGGGGAPVRFRVTLDGSAPGASHGADVGADGTGTVAGQRLYQLIRQRGPIADHT EEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE FSIEFLDPGVQAFAFTFG EEEEEECCCCEEEEEECC >Mature Secondary Structure MLLVILAYLGGVLTIVSPCILPVLPFVFARADRPFVRNGLPLLAGMAVTFAAVATLAAVG CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHC GGWIAQANQAGRWLAIAMVGVFGLTLLLPSLAEHMTRPLVALGNRLTGVASTADGEGRSS CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCHH IGASLLIGVATGLLWAPCAGPILGLVLTGAALRGASVGTTLLLVAYAAGAATSLAAALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GGRLFAAMKRSLGAGEWIRRGLGAAMLAGVGAIALGLDTGVLAQVSTIATGGLEQSLVNR HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHHHHHHH FAPRGNAMHGAAGGAVANANGPAMTASSAAAGDGPAMMAAGDAMRAAANGAGNHAAAGSG HCCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCC PAMMAAGDAMRAAANGAGADAAAGTAPAANALMSAATRAARRDASMLRVSAPALPVEGTL CCEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCC PPLSGATKWLNSPPLTNASLRGKVVLIDFWTYSCINCLRTLPYVKAWARKYKNDGLVVIG CCCCCHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VHAPEFAFERDPGNVKQATRDLGVTYPVAIDNGYAIWRAFNNEYWPAHYFVDAQGRIRYH ECCCCCCEECCCCHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCEEEEECCCCEEEEE HFGEGDYLQSERAIQQLLVEAGHPDAAQVPVGIDGPAASGAQAAADDTDMRSPETYVGYA ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RAEHFASPGGQLHDSEHDYAAPAQPGLGQWGLAGSWKVGGEQATLVKPGGRIVYRFHARD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECCE LHLVLGPGGGGAPVRFRVTLDGSAPGASHGADVGADGTGTVAGQRLYQLIRQRGPIADHT EEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE FSIEFLDPGVQAFAFTFG EEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]