| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024899
Identifier: 238024899
GI number: 238024899
Start: 1951630
End: 1952190
Strand: Direct
Name: 238024899
Synonym: bglu_2g15420
Alternate gene names: NA
Gene position: 1951630-1952190 (Clockwise)
Preceding gene: 238024896
Following gene: 238024901
Centisome position: 69.03
GC content: 66.13
Gene sequence:
>561_bases ATGTCCCACGAACACGCTCCCCACGATCACGCCGTCGAACACGCCGCCCGCTCGGGCGACCCGCTCTCGCGCTGGGTCGC GGTATTCACCGCGATCCTCGCCGCGCTGGCCAGCCTGCTCCACTACGAGGAAGGCGTGCTGCAGACCCAGGCGCTGATGT ACAAGAACGACGCCGTGCTGCTGCAGAGCAAGGCCAGCGACCAATGGAACCTCTATCAGGCGCAGTCGAACAAAGGCCAC ATGATGGAAGTCGCGGCCGAGCTGGCCGGCCCGGAAAAGCAGGCGCGCTTCCGCGAGCAGATCGACAAGTACAACGCGCG CAAGAAGGACATCTCGGACAAGGCGAAGGATCTCGAACGGCAGGTGGAGGAAGCGAACCGCAAGTCGGAGGGCAGGGAAC ACCCGCAGCACATGTTCGGGCAGGCACTCGCGCTGATCAGCGCGGCGATCTCGCTGGCGGCGATCACCTCGCTGACGGGC AGCCGGCGGCTGTTCGTGCTGGTCGGCTTCGCGGGGCTGGCGGGCGTGGGCGTGTCGATCGCGGCGTTCCTGAATATCTA G
Upstream 100 bases:
>100_bases GCGAGACGACACGCGAGCCTGCCATAATCCCCCGCTCGTCCCCAACCGCTCGCGCGCCGCGCGAGGCTTTCATCGCTTAC ACGAAGCACCGAGACTCACG
Downstream 100 bases:
>100_bases GCGCGCCTCGGCCGCCGGCCGGCTTCGGGCAGGCGGCCGAGGCAGGCGGGCGGCTCGAGCGGCACCGTTGGGTCGTCAAG CGCAAGCAGGCCCGGCCTGC
Product: putative tranmembrane protein
Products: NA
Alternate protein names: Tranmembrane Protein
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSHEHAPHDHAVEHAARSGDPLSRWVAVFTAILAALASLLHYEEGVLQTQALMYKNDAVLLQSKASDQWNLYQAQSNKGH MMEVAAELAGPEKQARFREQIDKYNARKKDISDKAKDLERQVEEANRKSEGREHPQHMFGQALALISAAISLAAITSLTG SRRLFVLVGFAGLAGVGVSIAAFLNI
Sequences:
>Translated_186_residues MSHEHAPHDHAVEHAARSGDPLSRWVAVFTAILAALASLLHYEEGVLQTQALMYKNDAVLLQSKASDQWNLYQAQSNKGH MMEVAAELAGPEKQARFREQIDKYNARKKDISDKAKDLERQVEEANRKSEGREHPQHMFGQALALISAAISLAAITSLTG SRRLFVLVGFAGLAGVGVSIAAFLNI >Mature_185_residues SHEHAPHDHAVEHAARSGDPLSRWVAVFTAILAALASLLHYEEGVLQTQALMYKNDAVLLQSKASDQWNLYQAQSNKGHM MEVAAELAGPEKQARFREQIDKYNARKKDISDKAKDLERQVEEANRKSEGREHPQHMFGQALALISAAISLAAITSLTGS RRLFVLVGFAGLAGVGVSIAAFLNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20384; Mature: 20253
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHEHAPHDHAVEHAARSGDPLSRWVAVFTAILAALASLLHYEEGVLQTQALMYKNDAVL CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LQSKASDQWNLYQAQSNKGHMMEVAAELAGPEKQARFREQIDKYNARKKDISDKAKDLER EECCCCCCCHHEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QVEEANRKSEGREHPQHMFGQALALISAAISLAAITSLTGSRRLFVLVGFAGLAGVGVSI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHH AAFLNI HHHHCC >Mature Secondary Structure SHEHAPHDHAVEHAARSGDPLSRWVAVFTAILAALASLLHYEEGVLQTQALMYKNDAVL CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LQSKASDQWNLYQAQSNKGHMMEVAAELAGPEKQARFREQIDKYNARKKDISDKAKDLER EECCCCCCCHHEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QVEEANRKSEGREHPQHMFGQALALISAAISLAAITSLTGSRRLFVLVGFAGLAGVGVSI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHH AAFLNI HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA