| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is resE [H]
Identifier: 238024892
GI number: 238024892
Start: 1943712
End: 1945226
Strand: Reverse
Name: resE [H]
Synonym: bglu_2g15350
Alternate gene names: 238024892
Gene position: 1945226-1943712 (Counterclockwise)
Preceding gene: 238024893
Following gene: 238024891
Centisome position: 68.8
GC content: 74.32
Gene sequence:
>1515_bases ATGATGCGGCGCCTGAGTCTGGGCCAGCGCCTGTCGCTGGTGTTCTCGGTGCTGCTGCTGGCCTGCTGCGGCGCCTCGGC GTGGCTGCAGATCCGCGCGAGCGACATGCACGAGAAGGAAGTGGTGCAGCGGCTGTCGCGCGACCTGGCCGGCCACATCG CGCGGAGCACGAGGCTGATGGACGACGGCGGCCTGCGGCAGGACGCGGTGCGCCGGCTGTTCGGCCAGCTGATGGGCGTG AATCCGAGCGTCGAGGTCTACCTGCTCGACAACGCAGGGCGCATCCGCGGCGACGACGCGCCGCCGGGCCGGGTGCGGCG CGAGCGCGTCGATCTCGCGCCGGTGGCGCGCTTCCTTGCCGGCCAGCCGCTGCCGATCCTGGGCGACGATCCGCGCAGCC TCGACGCGCGCAAGGTGTTCAGCGTCGCGCCGCTGCAGTTGCCGGGCCGCGCGCCGTCGGGCTACATCTACGTGGTGCTG CTCGGCGAGGCGCACGACGAGCTGGCCGCGCGCGTGGCGGCCAGCTCGGTGCTGCGTACCACGCTCTGGTCGATCGCGCT GGTGGCGCTGCTCGGGCTGCTGGCCGGCCTGACCGGGTTCGCGCTGATCACGCGGCCGCTGCGCCGCTTCTCCGAGGCGA TGCGCCGCTTCGATGCGAACGGCGAGCCCGACGCGCAGCCGCCGCTGCCGCATTCGTCGGCGGCCGGGGCGCGCGACGAG ATCGCCGTGCTCGAAACCACCTTTGAGCAGATGGCCGCGCGCATCGGCGCGCAGTGGCGCGCGCTCAAGCAGCAGGACCG CCAGCGCCGCGAGCTGATCGCGAACCTCTCGCACGACCTGCGCACGCCGCTGACCGCGCTGCACGGCTACCTGGAAACGC TCGCGCTGAAGGGCGCCGCGCTCGCGCCGGCCGAGCGCGAGCGCTATCTGTCGATCGCGCTGGCGCAGAGCGACAAGGTG GGGCGCCTCGCGCGCGCGCTGTTCGAGCTGGCGCGGCTCGAATCGGGGCTGGTGCAGCCCGCGCTCGAGGACGGCTCGCT CGTCGATCTGGTGCAGGACGTGCTGGCCAAGTTCGAGCTGGGCGCCAAGGCGCGCGGGATCACGCTCGACGCGCGGATCG AGCCGCGCCTGCCGAACGTGCATGCCGATTTCGGCATGATCGAGCGCGTGCTGACCAACCTGCTCGACAACGCGCTGCGC CACACGCCGGCAGGCGGCCAGGTGGCGGTGGAGCTGGCCGCGCACGGCGGCGCGGTCGGCGTGACCGTGCGCGACACCGG GCCCGGCGTGCCGGCGGCGCTGCGCGAGCGGCTGTTCCGGCGCTCGGTGGCAGCCTCGCCGAGCGCTCCGGACGGCGCGC CGGGCACGGGCGAGGCGCAGCGCGGCGGGCTCGGCCTGCTGCTCGTGCAGCGCATGCTGCAGTTGCACGACAGCGAGGCG CGGCTGGTCGACGATCCGCGCGGCGGCGCGGTATTCACGTTCGCGCTGCAGGCGGCCGGGACCGCCGCGCGTTAG
Upstream 100 bases:
>100_bases TCGAGGCCGACCCGGCGCAGCCGGCGCGCATCCTGACGGTCTGGGGCCGCGGCTACAAGCTGGTCGCGCCGGGGCCGGCG GCCGGCGCGGGCCGCGAGGC
Downstream 100 bases:
>100_bases CGCCGCCGGTGGCCGGAACTTCAATGGCTATTTCGAGAACGGGAGCGGACACCAGCGTGACGCAACACAATCCGGGGCTG ATTCACGATCGGCATGGCGT
Product: Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MMRRLSLGQRLSLVFSVLLLACCGASAWLQIRASDMHEKEVVQRLSRDLAGHIARSTRLMDDGGLRQDAVRRLFGQLMGV NPSVEVYLLDNAGRIRGDDAPPGRVRRERVDLAPVARFLAGQPLPILGDDPRSLDARKVFSVAPLQLPGRAPSGYIYVVL LGEAHDELAARVAASSVLRTTLWSIALVALLGLLAGLTGFALITRPLRRFSEAMRRFDANGEPDAQPPLPHSSAAGARDE IAVLETTFEQMAARIGAQWRALKQQDRQRRELIANLSHDLRTPLTALHGYLETLALKGAALAPAERERYLSIALAQSDKV GRLARALFELARLESGLVQPALEDGSLVDLVQDVLAKFELGAKARGITLDARIEPRLPNVHADFGMIERVLTNLLDNALR HTPAGGQVAVELAAHGGAVGVTVRDTGPGVPAALRERLFRRSVAASPSAPDGAPGTGEAQRGGLGLLLVQRMLQLHDSEA RLVDDPRGGAVFTFALQAAGTAAR
Sequences:
>Translated_504_residues MMRRLSLGQRLSLVFSVLLLACCGASAWLQIRASDMHEKEVVQRLSRDLAGHIARSTRLMDDGGLRQDAVRRLFGQLMGV NPSVEVYLLDNAGRIRGDDAPPGRVRRERVDLAPVARFLAGQPLPILGDDPRSLDARKVFSVAPLQLPGRAPSGYIYVVL LGEAHDELAARVAASSVLRTTLWSIALVALLGLLAGLTGFALITRPLRRFSEAMRRFDANGEPDAQPPLPHSSAAGARDE IAVLETTFEQMAARIGAQWRALKQQDRQRRELIANLSHDLRTPLTALHGYLETLALKGAALAPAERERYLSIALAQSDKV GRLARALFELARLESGLVQPALEDGSLVDLVQDVLAKFELGAKARGITLDARIEPRLPNVHADFGMIERVLTNLLDNALR HTPAGGQVAVELAAHGGAVGVTVRDTGPGVPAALRERLFRRSVAASPSAPDGAPGTGEAQRGGLGLLLVQRMLQLHDSEA RLVDDPRGGAVFTFALQAAGTAAR >Mature_504_residues MMRRLSLGQRLSLVFSVLLLACCGASAWLQIRASDMHEKEVVQRLSRDLAGHIARSTRLMDDGGLRQDAVRRLFGQLMGV NPSVEVYLLDNAGRIRGDDAPPGRVRRERVDLAPVARFLAGQPLPILGDDPRSLDARKVFSVAPLQLPGRAPSGYIYVVL LGEAHDELAARVAASSVLRTTLWSIALVALLGLLAGLTGFALITRPLRRFSEAMRRFDANGEPDAQPPLPHSSAAGARDE IAVLETTFEQMAARIGAQWRALKQQDRQRRELIANLSHDLRTPLTALHGYLETLALKGAALAPAERERYLSIALAQSDKV GRLARALFELARLESGLVQPALEDGSLVDLVQDVLAKFELGAKARGITLDARIEPRLPNVHADFGMIERVLTNLLDNALR HTPAGGQVAVELAAHGGAVGVTVRDTGPGVPAALRERLFRRSVAASPSAPDGAPGTGEAQRGGLGLLLVQRMLQLHDSEA RLVDDPRGGAVFTFALQAAGTAAR
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786912, Length=243, Percent_Identity=30.4526748971193, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788549, Length=253, Percent_Identity=28.8537549407115, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786600, Length=279, Percent_Identity=28.673835125448, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1788713, Length=234, Percent_Identity=26.4957264957265, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1789403, Length=356, Percent_Identity=30.6179775280899, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI145693157, Length=261, Percent_Identity=25.2873563218391, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1788393, Length=260, Percent_Identity=26.1538461538462, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790861, Length=443, Percent_Identity=24.3792325056433, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1789149, Length=263, Percent_Identity=27.3764258555133, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786783, Length=344, Percent_Identity=26.1627906976744, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790436, Length=249, Percent_Identity=27.710843373494, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI48994928, Length=246, Percent_Identity=26.0162601626016, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87082128, Length=237, Percent_Identity=24.4725738396624, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790346, Length=245, Percent_Identity=27.7551020408163, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788279, Length=326, Percent_Identity=22.0858895705521, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 54198; Mature: 54198
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRRLSLGQRLSLVFSVLLLACCGASAWLQIRASDMHEKEVVQRLSRDLAGHIARSTRLM CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC DDGGLRQDAVRRLFGQLMGVNPSVEVYLLDNAGRIRGDDAPPGRVRRERVDLAPVARFLA CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHHHC GQPLPILGDDPRSLDARKVFSVAPLQLPGRAPSGYIYVVLLGEAHDELAARVAASSVLRT CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH TLWSIALVALLGLLAGLTGFALITRPLRRFSEAMRRFDANGEPDAQPPLPHSSAAGARDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH IAVLETTFEQMAARIGAQWRALKQQDRQRRELIANLSHDLRTPLTALHGYLETLALKGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LAPAERERYLSIALAQSDKVGRLARALFELARLESGLVQPALEDGSLVDLVQDVLAKFEL CCCHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC GAKARGITLDARIEPRLPNVHADFGMIERVLTNLLDNALRHTPAGGQVAVELAAHGGAVG CCCCCCEEEECEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE VTVRDTGPGVPAALRERLFRRSVAASPSAPDGAPGTGEAQRGGLGLLLVQRMLQLHDSEA EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC RLVDDPRGGAVFTFALQAAGTAAR CCCCCCCCCEEEEEEEHHCCCCCC >Mature Secondary Structure MMRRLSLGQRLSLVFSVLLLACCGASAWLQIRASDMHEKEVVQRLSRDLAGHIARSTRLM CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC DDGGLRQDAVRRLFGQLMGVNPSVEVYLLDNAGRIRGDDAPPGRVRRERVDLAPVARFLA CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHHHHC GQPLPILGDDPRSLDARKVFSVAPLQLPGRAPSGYIYVVLLGEAHDELAARVAASSVLRT CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH TLWSIALVALLGLLAGLTGFALITRPLRRFSEAMRRFDANGEPDAQPPLPHSSAAGARDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH IAVLETTFEQMAARIGAQWRALKQQDRQRRELIANLSHDLRTPLTALHGYLETLALKGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LAPAERERYLSIALAQSDKVGRLARALFELARLESGLVQPALEDGSLVDLVQDVLAKFEL CCCHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC GAKARGITLDARIEPRLPNVHADFGMIERVLTNLLDNALRHTPAGGQVAVELAAHGGAVG CCCCCCEEEECEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE VTVRDTGPGVPAALRERLFRRSVAASPSAPDGAPGTGEAQRGGLGLLLVQRMLQLHDSEA EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC RLVDDPRGGAVFTFALQAAGTAAR CCCCCCCCCEEEEEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]