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The map label for this gene is yclJ [H]

Identifier: 238024893

GI number: 238024893

Start: 1945223

End: 1945957

Strand: Reverse

Name: yclJ [H]

Synonym: bglu_2g15360

Alternate gene names: 238024893

Gene position: 1945957-1945223 (Counterclockwise)

Preceding gene: 238024897

Following gene: 238024892

Centisome position: 68.83

GC content: 70.88

Gene sequence:

>735_bases
ATGGACTCACTGAAACGCATCCTGATCGTCGAAGACGATGCCGACATCGCGAACGTGCTCGCGCTGCACCTGCGCGACGA
GCGCTACGAGGTGGTCCACTGCGCGAACGGCGACGACGGCCTGCGGCGCCTGGAGCAGGGCGGCTGGGACGCGCTGATCC
TGGACCTGATGCTGCCCGGCGTGGACGGCCTCGAGATCTGCCGGCGCGCACGCGCGATGGCGCGCTACACGCCGATCATC
ATCATCAGCGCGCGCTCGAGCGAGGTGCACCGGATTCTCGGCCTCGAGCTCGGCGCCGACGATTACCTTGCCAAGCCGTT
CTCGATGCTGGAGCTGGTGGCGCGCGTGAAGGCGCTGCTGCGGCGCGTCGAGGCGCTCTCGCGCGACACGCGCGCCGAGG
CCGGGCGCGTGGAGGTGGGCGGCCTGAGGCTCGATCCGCTCACGCGCGAGGCCGCCGTGGACGGCGCCGCGATCGACCTG
ACGCCGCGCGAATTCGACCTGCTCTATCACTTCGCGCGCCATCCCGGCAAGGCGTTCTCGCGCACCGATCTGCTCAACGC
CGTATGGGGCTATCAGCACGAGGGCTACGAGCACACCGTGAACACCCACATCAACCGGCTGCGCGCCAAGATCGAGGCCG
ACCCGGCGCAGCCGGCGCGCATCCTGACGGTCTGGGGCCGCGGCTACAAGCTGGTCGCGCCGGGGCCGGCGGCCGGCGCG
GGCCGCGAGGCATGA

Upstream 100 bases:

>100_bases
CGAAATCGTGACGACTCGCCGCCGCGAATGTCCGACAATCGGGCCATGCCGCACGGTGCCGGCGCAGGCCGGCCCCGACT
CTTCAATTGCCGTCACGCCT

Downstream 100 bases:

>100_bases
TGCGGCGCCTGAGTCTGGGCCAGCGCCTGTCGCTGGTGTTCTCGGTGCTGCTGCTGGCCTGCTGCGGCGCCTCGGCGTGG
CTGCAGATCCGCGCGAGCGA

Product: winged helix family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MDSLKRILIVEDDADIANVLALHLRDERYEVVHCANGDDGLRRLEQGGWDALILDLMLPGVDGLEICRRARAMARYTPII
IISARSSEVHRILGLELGADDYLAKPFSMLELVARVKALLRRVEALSRDTRAEAGRVEVGGLRLDPLTREAAVDGAAIDL
TPREFDLLYHFARHPGKAFSRTDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAQPARILTVWGRGYKLVAPGPAAGA
GREA

Sequences:

>Translated_244_residues
MDSLKRILIVEDDADIANVLALHLRDERYEVVHCANGDDGLRRLEQGGWDALILDLMLPGVDGLEICRRARAMARYTPII
IISARSSEVHRILGLELGADDYLAKPFSMLELVARVKALLRRVEALSRDTRAEAGRVEVGGLRLDPLTREAAVDGAAIDL
TPREFDLLYHFARHPGKAFSRTDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAQPARILTVWGRGYKLVAPGPAAGA
GREA
>Mature_244_residues
MDSLKRILIVEDDADIANVLALHLRDERYEVVHCANGDDGLRRLEQGGWDALILDLMLPGVDGLEICRRARAMARYTPII
IISARSSEVHRILGLELGADDYLAKPFSMLELVARVKALLRRVEALSRDTRAEAGRVEVGGLRLDPLTREAAVDGAAIDL
TPREFDLLYHFARHPGKAFSRTDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAQPARILTVWGRGYKLVAPGPAAGA
GREA

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=239, Percent_Identity=39.3305439330544, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=39.3013100436681, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=36.9565217391304, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786784, Length=229, Percent_Identity=37.5545851528384, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=37.719298245614, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=37.7777777777778, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=37.5, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=35.8407079646018, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=34.3478260869565, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1790552, Length=228, Percent_Identity=36.8421052631579, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=35.8078602620087, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI145693140, Length=238, Percent_Identity=31.9327731092437, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=31.6964285714286, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=35.9307359307359, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1788550, Length=132, Percent_Identity=28.7878787878788, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27055; Mature: 27055

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLKRILIVEDDADIANVLALHLRDERYEVVHCANGDDGLRRLEQGGWDALILDLMLPG
CCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHEEHHHHCCC
VDGLEICRRARAMARYTPIIIISARSSEVHRILGLELGADDYLAKPFSMLELVARVKALL
CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHEEECCCHHHHCHHHHHHHHHHHHHHH
RRVEALSRDTRAEAGRVEVGGLRLDPLTREAAVDGAAIDLTPREFDLLYHFARHPGKAFS
HHHHHHHHHHHCCCCCEEECCEEECCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHH
RTDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAQPARILTVWGRGYKLVAPGPAAGA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCCC
GREA
CCCC
>Mature Secondary Structure
MDSLKRILIVEDDADIANVLALHLRDERYEVVHCANGDDGLRRLEQGGWDALILDLMLPG
CCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHEEHHHHCCC
VDGLEICRRARAMARYTPIIIISARSSEVHRILGLELGADDYLAKPFSMLELVARVKALL
CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHEEECCCHHHHCHHHHHHHHHHHHHHH
RRVEALSRDTRAEAGRVEVGGLRLDPLTREAAVDGAAIDLTPREFDLLYHFARHPGKAFS
HHHHHHHHHHHCCCCCEEECCEEECCCCHHHHCCCCEEECCCHHHHHHHHHHHCCCCHHH
RTDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAQPARILTVWGRGYKLVAPGPAAGA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCCCC
GREA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]