| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ykpB [H]
Identifier: 238024773
GI number: 238024773
Start: 1803154
End: 1804089
Strand: Direct
Name: ykpB [H]
Synonym: bglu_2g14110
Alternate gene names: 238024773
Gene position: 1803154-1804089 (Clockwise)
Preceding gene: 238024771
Following gene: 238024774
Centisome position: 63.78
GC content: 71.79
Gene sequence:
>936_bases ATGCGAATTCTGATAGTAGGCGCCGGCGCCGTCGGCGGGTATTTCGGCGGACGGCTCGCGAACGCGGGCCGCGACGTCTC GTTTCTGGTACGCCCGGCCCGCGCCGCGCAGTTGCACGCCGACGGGCTGGTGATCCGCAGCCCGCACGGCGACCTGACGC TGGCCGAGGTGAAGACCGTGGACGCGGCCGCGATCGACGGCCACTACGACCTGATCGTGCTGAGCTGCAAGGCCTACAGC CTCGACGGCGCGATCGCCTCGTTCGCGCCGGCGGTGGGCCCGGCCACGCGCATCCTGCCGCTCCTCAACGGCATGCGCCA CATCGACGTGCTGACCCGCCAGTTCGGCGAGACACGCGTGCTGGGCGGCCAGTGCGTGATCGCGGCGACGCTGAACGAAG GTCACGAGATCGCGCACCTGAACGAGCTGCACGCGATCACCTTCGGCGCGCTCGCGGGCGGTCCCGACGCGCGCGTGACG GCAATCCTCGGCGAGCTGTCGGGCGCCGGCTTCGAGGTGCGGGCCGACGAGGCGATCCGCCAGCGGATGTGGGACAAGTG GGTGTTCCTGGCCACGCTCGCCTGCAGCACCACGCTGTGCCGCGCCTCGCTGGGCGAGATCCTCGCGGCGCCGGACGGCA AGCGGCTGATCGGCTCGATCTTCGACGAATGCCTGGCGATCGCGCGCCACAACGGCTTCGCGGCCGACGCGGCCACCATC GAGCGCGCCACCGCGATGCTCTACGCGCCCGGCTCGCCGATGACGGCCTCGATGCTGCGCGACATGCTCAACGGCGCGCC GATCGAGGCCGCGCATGTGGTGGGCGACCTGATCTCGCGCGGCGGGCTCGAACAGCACGACGCCACCACCCTGTCGCTGC TGCGCGTGGCCTACGCGAACCTCGGCGCCTACGAGGCGCGGCGCGCGCAAGCCTGA
Upstream 100 bases:
>100_bases GCCGCCGAACGCGTGCGCGCGCGGCACGCGCCGCCCGGGTCTGAGACAATCCGCGACGGTGCCGGCCCTGCCCGGCGCCA CCGATTCCCCAGGAGTGACG
Downstream 100 bases:
>100_bases CGCGCCCGCCCGGCCGGGCGGGCAGATCCGGCCCCCCGGCATGCGCCCGGCGCCCCTCGCGCCCGACCCGCCCGACCGGC TGCGCGCCGCCTCCTGCGCA
Product: 2-dehydropantoate 2-reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRILIVGAGAVGGYFGGRLANAGRDVSFLVRPARAAQLHADGLVIRSPHGDLTLAEVKTVDAAAIDGHYDLIVLSCKAYS LDGAIASFAPAVGPATRILPLLNGMRHIDVLTRQFGETRVLGGQCVIAATLNEGHEIAHLNELHAITFGALAGGPDARVT AILGELSGAGFEVRADEAIRQRMWDKWVFLATLACSTTLCRASLGEILAAPDGKRLIGSIFDECLAIARHNGFAADAATI ERATAMLYAPGSPMTASMLRDMLNGAPIEAAHVVGDLISRGGLEQHDATTLSLLRVAYANLGAYEARRAQA
Sequences:
>Translated_311_residues MRILIVGAGAVGGYFGGRLANAGRDVSFLVRPARAAQLHADGLVIRSPHGDLTLAEVKTVDAAAIDGHYDLIVLSCKAYS LDGAIASFAPAVGPATRILPLLNGMRHIDVLTRQFGETRVLGGQCVIAATLNEGHEIAHLNELHAITFGALAGGPDARVT AILGELSGAGFEVRADEAIRQRMWDKWVFLATLACSTTLCRASLGEILAAPDGKRLIGSIFDECLAIARHNGFAADAATI ERATAMLYAPGSPMTASMLRDMLNGAPIEAAHVVGDLISRGGLEQHDATTLSLLRVAYANLGAYEARRAQA >Mature_311_residues MRILIVGAGAVGGYFGGRLANAGRDVSFLVRPARAAQLHADGLVIRSPHGDLTLAEVKTVDAAAIDGHYDLIVLSCKAYS LDGAIASFAPAVGPATRILPLLNGMRHIDVLTRQFGETRVLGGQCVIAATLNEGHEIAHLNELHAITFGALAGGPDARVT AILGELSGAGFEVRADEAIRQRMWDKWVFLATLACSTTLCRASLGEILAAPDGKRLIGSIFDECLAIARHNGFAADAATI ERATAMLYAPGSPMTASMLRDMLNGAPIEAAHVVGDLISRGGLEQHDATTLSLLRVAYANLGAYEARRAQA
Specific function: Unknown
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: NA
Molecular weight: Translated: 32613; Mature: 32613
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILIVGAGAVGGYFGGRLANAGRDVSFLVRPARAAQLHADGLVIRSPHGDLTLAEVKTV CEEEEEECCCCCHHCCCHHHCCCCCEEEEECCCHHHEEECCCEEEECCCCCEEEEHEEEH DAAAIDGHYDLIVLSCKAYSLDGAIASFAPAVGPATRILPLLNGMRHIDVLTRQFGETRV HHEEECCCEEEEEEEEEEEECCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCEE LGGQCVIAATLNEGHEIAHLNELHAITFGALAGGPDARVTAILGELSGAGFEVRADEAIR ECCCEEEEEECCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCEEEECHHHHH QRMWDKWVFLATLACSTTLCRASLGEILAAPDGKRLIGSIFDECLAIARHNGFAADAATI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH ERATAMLYAPGSPMTASMLRDMLNGAPIEAAHVVGDLISRGGLEQHDATTLSLLRVAYAN HHHEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LGAYEARRAQA CCHHHHHHCCC >Mature Secondary Structure MRILIVGAGAVGGYFGGRLANAGRDVSFLVRPARAAQLHADGLVIRSPHGDLTLAEVKTV CEEEEEECCCCCHHCCCHHHCCCCCEEEEECCCHHHEEECCCEEEECCCCCEEEEHEEEH DAAAIDGHYDLIVLSCKAYSLDGAIASFAPAVGPATRILPLLNGMRHIDVLTRQFGETRV HHEEECCCEEEEEEEEEEEECCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCEE LGGQCVIAATLNEGHEIAHLNELHAITFGALAGGPDARVTAILGELSGAGFEVRADEAIR ECCCEEEEEECCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCEEEECHHHHH QRMWDKWVFLATLACSTTLCRASLGEILAAPDGKRLIGSIFDECLAIARHNGFAADAATI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH ERATAMLYAPGSPMTASMLRDMLNGAPIEAAHVVGDLISRGGLEQHDATTLSLLRVAYAN HHHEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LGAYEARRAQA CCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]