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The map label for this gene is pupB [H]

Identifier: 238024610

GI number: 238024610

Start: 1561895

End: 1564414

Strand: Reverse

Name: pupB [H]

Synonym: bglu_2g12250

Alternate gene names: 238024610

Gene position: 1564414-1561895 (Counterclockwise)

Preceding gene: 238024611

Following gene: 238024604

Centisome position: 55.33

GC content: 70.28

Gene sequence:

>2520_bases
TTGCCCTCGTTTCCCGATTCTCCGATCATGCAACCGACCCGTACCAGCCGTTCCTCCGTCTTCTGCGCGTGCCGCGCGAC
CGATTCCGCCGCGCTCGTGCCGCGGCGCCTGGCCGGCCGGCTCGCGGCCGCCGCGCTGCTGACGGCGCTGGTGCCGCCCG
CCGCGCTGGCCGCCGAGGCCGGCGAGGCGGCCGCGGTGGCGGCGCGCCGCTACGCGATCCCGGCCGGCCCGCTGGAGGGC
GCGCTGAACCGCTTCGGCCACGAGGCCGGCATCCTGCTCGCGTTTCCGGCCGAGCAGGTGGCCGGCCTGCGCAGCCCGGG
GCTGCATGGCCGGTTCGACGTGCCGCAGGCGCTCGACCAGCTGCTGTCGGGCAGCGGCCTGAGCGCGCTGCGCCAGCCGA
GCGGCGGCTACACGCTGGTGCATGCCGCGGCGGCGGCCGGCACGGCGCCGCTGCCGGCCACCGCGCTCGCCACCATCGTG
GTCGAGCGGCGCGCGGCGAAGGCCGACAGCTACCGCCCGCCGCGCGAGGCAAACGTCACGCGCTCGAACGCGCCGGTGCT
CGACACGGCGCAGGCGGTCAACATCGTGCCGGCGCAGGTGCTGCGCGACCAGAAACCGCGCAACCTCGACGACGCGCTCG
CCAACGTCAGCGGCATCACCCAGGGCAACACGCTGGCCGGCACGCAGGACGCGATCATGAAGCGCGGCTTCGGCGACAAC
CGCGACGGCTCGATCATGCGCAACGGCATGCCGGTGGTGCAGGGCCGGGCGCTGGACGCCACCGCCGACAGCGTCGAGGT
GCTGAAGGGGCCGGCCTCGCTGCTGTACGGGATCATGGACCCGGGCGGCGTGGTCAACGTGCTCAGCAAGGTGCCGCAAC
TGGTGCGCTCGAACACCGTGGCGGTGACGGGCGAGACCTACGGGCACGGCAAGAACGGCGGCGACGTGATGCTCGACCTG
ACAGGCCCGATCGGCGACACGAAGCTGGCCTACCGGCTGGTGGCCGATCACGCCGACACGCCCTACTGGCGCAACTTCGG
CACCAGCCGCGAGACGCTGGTGGCGCCGTCGCTGGCCTGGTATGGCCGCGACACGCAGGTGGTGCTGTCCTACGAGCATC
GCGATTTTCTCTATCCGTTCGATCGCGGCACGGCGCTCGACCCGCGCACCGGCAGGCCGCTCGCGATCCCCGCGCGCGAG
CGGCTGGACGAGCCCTGGAACAACCTGGTCGGCGCCTCCAACCTGTTCCAGCTGTCGGCCGACCAGCAGTTCAGCCCGGA
CTGGAGCGCCCACCTGGGCTACAGCTACGACCGCGAGACCTATGACGCGAACCAAGTGCGCATCACCGGCCTGAACCCCG
CCAGGGGCACGCTCACGCGCAGCAACGATGCCACCCACGGCGCGCTCAGCACCGACAGTTACGGCGTGGCCTACGTGAAC
GGCAAGCTGCGGCTGGCCGGCATGCAGCACGACCTGCAGTTCGGCGTGGACAGCGAATACCGCCGCATCTACCGGGCCGA
CCTGCTGCGTCAGGCGGTGTCGGTGCCGTTCAACTACCTGAACCCGGTCTATGGCCTGATCGCGCCGTCCTCCACGGTGT
CGCCGCCCGACAGCGACCAGACCGACAAGCTGCACAGCCTCGGCCTGTTCGCGCAGGATGCCGTGCATCTGACCGACAAG
TGGATCGTGAGCGGCGGCGTGCGCTTCATGCGCTTCAGCGAGCTGGCCGGCAAGGGCCGCCCGTTCGTCGCCAACACCAA
CCTGGACGGTACGCGGTGGCTGCCGCGCGCCGGCATCGTCTACCAGGCCAGCCGGACGTTCTCGCTGTACGGCAGCTATT
CGAAATCGCTGAAGCCGAGCTCGTCGATCGCCACGCTCGCCTCGGGCTACATCATCGACGGCGCCACGCCGCCCGAGCAG
TCCACCGCCTACGAGGTGGGCGCGAAGCTCGACATGCCGGGCGGCATGACGGGCACGCTCGCGCTGTTCGACATCGACAA
GAAGAACGTGCTGGTCTCGCAGTTCAACGACGTGACCAAGCTGACCGACTGGCGCACCTCGGGCCGCGCGCGCTCGCGCG
GCGTGGAGCTCGACGTGTCGGGCCGGATCGGCGCGCACCTGGACCTGATCGCGAGCTACGCCTACCTCGACGCGAAGACC
ACCGAGGACCCGCTCTACACCGGCAACCGGCTCTGGAACGTGGCGCGCAATACGGCATCGCTGTCGGCCGTCTACGACCT
CGGCACGCTGTTCGGCGGTGACGACCTGCGCATCGGCGGCGCGACGCACTACGTGGGCTCGCGGCCCGGCGATTCGGCCA
ACAGCTTCACGCTGCCGTCCTACCTGCTGTTCGACACGTTCGCCACCTACGACACGCGCATCGGCAGGCAGCGCCTGTCG
TTCCAGCTGAACGTGAAGAACCTGTTCAACCGCACCTATTACCCGTCGAGCGCGAACCGCTATTTCGTATCGATCGGCGA
CGCACGGCAGGTGCTGCTGACCACCACGCTGCAATTCTGA

Upstream 100 bases:

>100_bases
CCGAGCGGTCAGGCCGTCCGCCGCCTTTCACAAACTATTTTCAGAAAATCTGAGCTGTTTTGCCTGGTTCGCGTGACAGG
GAACAGGAAAGCCACTCTTT

Downstream 100 bases:

>100_bases
GCCGGCCGGGCGAGGCGGGCGTGCGAGCCCGCGGCGCGGGTTGGCGGCATCGCGCGGCGCGGCCCGGCGCGGCCCGGCGC
GGCGGCACGGTTCGACGCCG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 839; Mature: 838

Protein sequence:

>839_residues
MPSFPDSPIMQPTRTSRSSVFCACRATDSAALVPRRLAGRLAAAALLTALVPPAALAAEAGEAAAVAARRYAIPAGPLEG
ALNRFGHEAGILLAFPAEQVAGLRSPGLHGRFDVPQALDQLLSGSGLSALRQPSGGYTLVHAAAAAGTAPLPATALATIV
VERRAAKADSYRPPREANVTRSNAPVLDTAQAVNIVPAQVLRDQKPRNLDDALANVSGITQGNTLAGTQDAIMKRGFGDN
RDGSIMRNGMPVVQGRALDATADSVEVLKGPASLLYGIMDPGGVVNVLSKVPQLVRSNTVAVTGETYGHGKNGGDVMLDL
TGPIGDTKLAYRLVADHADTPYWRNFGTSRETLVAPSLAWYGRDTQVVLSYEHRDFLYPFDRGTALDPRTGRPLAIPARE
RLDEPWNNLVGASNLFQLSADQQFSPDWSAHLGYSYDRETYDANQVRITGLNPARGTLTRSNDATHGALSTDSYGVAYVN
GKLRLAGMQHDLQFGVDSEYRRIYRADLLRQAVSVPFNYLNPVYGLIAPSSTVSPPDSDQTDKLHSLGLFAQDAVHLTDK
WIVSGGVRFMRFSELAGKGRPFVANTNLDGTRWLPRAGIVYQASRTFSLYGSYSKSLKPSSSIATLASGYIIDGATPPEQ
STAYEVGAKLDMPGGMTGTLALFDIDKKNVLVSQFNDVTKLTDWRTSGRARSRGVELDVSGRIGAHLDLIASYAYLDAKT
TEDPLYTGNRLWNVARNTASLSAVYDLGTLFGGDDLRIGGATHYVGSRPGDSANSFTLPSYLLFDTFATYDTRIGRQRLS
FQLNVKNLFNRTYYPSSANRYFVSIGDARQVLLTTTLQF

Sequences:

>Translated_839_residues
MPSFPDSPIMQPTRTSRSSVFCACRATDSAALVPRRLAGRLAAAALLTALVPPAALAAEAGEAAAVAARRYAIPAGPLEG
ALNRFGHEAGILLAFPAEQVAGLRSPGLHGRFDVPQALDQLLSGSGLSALRQPSGGYTLVHAAAAAGTAPLPATALATIV
VERRAAKADSYRPPREANVTRSNAPVLDTAQAVNIVPAQVLRDQKPRNLDDALANVSGITQGNTLAGTQDAIMKRGFGDN
RDGSIMRNGMPVVQGRALDATADSVEVLKGPASLLYGIMDPGGVVNVLSKVPQLVRSNTVAVTGETYGHGKNGGDVMLDL
TGPIGDTKLAYRLVADHADTPYWRNFGTSRETLVAPSLAWYGRDTQVVLSYEHRDFLYPFDRGTALDPRTGRPLAIPARE
RLDEPWNNLVGASNLFQLSADQQFSPDWSAHLGYSYDRETYDANQVRITGLNPARGTLTRSNDATHGALSTDSYGVAYVN
GKLRLAGMQHDLQFGVDSEYRRIYRADLLRQAVSVPFNYLNPVYGLIAPSSTVSPPDSDQTDKLHSLGLFAQDAVHLTDK
WIVSGGVRFMRFSELAGKGRPFVANTNLDGTRWLPRAGIVYQASRTFSLYGSYSKSLKPSSSIATLASGYIIDGATPPEQ
STAYEVGAKLDMPGGMTGTLALFDIDKKNVLVSQFNDVTKLTDWRTSGRARSRGVELDVSGRIGAHLDLIASYAYLDAKT
TEDPLYTGNRLWNVARNTASLSAVYDLGTLFGGDDLRIGGATHYVGSRPGDSANSFTLPSYLLFDTFATYDTRIGRQRLS
FQLNVKNLFNRTYYPSSANRYFVSIGDARQVLLTTTLQF
>Mature_838_residues
PSFPDSPIMQPTRTSRSSVFCACRATDSAALVPRRLAGRLAAAALLTALVPPAALAAEAGEAAAVAARRYAIPAGPLEGA
LNRFGHEAGILLAFPAEQVAGLRSPGLHGRFDVPQALDQLLSGSGLSALRQPSGGYTLVHAAAAAGTAPLPATALATIVV
ERRAAKADSYRPPREANVTRSNAPVLDTAQAVNIVPAQVLRDQKPRNLDDALANVSGITQGNTLAGTQDAIMKRGFGDNR
DGSIMRNGMPVVQGRALDATADSVEVLKGPASLLYGIMDPGGVVNVLSKVPQLVRSNTVAVTGETYGHGKNGGDVMLDLT
GPIGDTKLAYRLVADHADTPYWRNFGTSRETLVAPSLAWYGRDTQVVLSYEHRDFLYPFDRGTALDPRTGRPLAIPARER
LDEPWNNLVGASNLFQLSADQQFSPDWSAHLGYSYDRETYDANQVRITGLNPARGTLTRSNDATHGALSTDSYGVAYVNG
KLRLAGMQHDLQFGVDSEYRRIYRADLLRQAVSVPFNYLNPVYGLIAPSSTVSPPDSDQTDKLHSLGLFAQDAVHLTDKW
IVSGGVRFMRFSELAGKGRPFVANTNLDGTRWLPRAGIVYQASRTFSLYGSYSKSLKPSSSIATLASGYIIDGATPPEQS
TAYEVGAKLDMPGGMTGTLALFDIDKKNVLVSQFNDVTKLTDWRTSGRARSRGVELDVSGRIGAHLDLIASYAYLDAKTT
EDPLYTGNRLWNVARNTASLSAVYDLGTLFGGDDLRIGGATHYVGSRPGDSANSFTLPSYLLFDTFATYDTRIGRQRLSF
QLNVKNLFNRTYYPSSANRYFVSIGDARQVLLTTTLQF

Specific function: Specific receptor for the siderophores ferric pseudobactin BN8 and ferric pseudobactin BN7, iron chelating molecules that allow the organism to extract iron from the environment, especially under iron-restricted conditions [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=726, Percent_Identity=26.5840220385675, Blast_Score=157, Evalue=3e-39,
Organism=Escherichia coli, GI1787344, Length=748, Percent_Identity=24.331550802139, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1787024, Length=143, Percent_Identity=34.2657342657343, Blast_Score=67, Evalue=6e-12,
Organism=Escherichia coli, GI1787723, Length=305, Percent_Identity=23.9344262295082, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR011662
- InterPro:   IPR000531
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 90239; Mature: 90108

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFPDSPIMQPTRTSRSSVFCACRATDSAALVPRRLAGRLAAAALLTALVPPAALAAEA
CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
GEAAAVAARRYAIPAGPLEGALNRFGHEAGILLAFPAEQVAGLRSPGLHGRFDVPQALDQ
CCHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECHHHHCCCCCCCCCCCCCCHHHHHH
LLSGSGLSALRQPSGGYTLVHAAAAAGTAPLPATALATIVVERRAAKADSYRPPREANVT
HHCCCCCHHHHCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RSNAPVLDTAQAVNIVPAQVLRDQKPRNLDDALANVSGITQGNTLAGTQDAIMKRGFGDN
CCCCCCCCCHHHHHCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCC
RDGSIMRNGMPVVQGRALDATADSVEVLKGPASLLYGIMDPGGVVNVLSKVPQLVRSNTV
CCCCEEECCCCEECCCCCCCCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCEE
AVTGETYGHGKNGGDVMLDLTGPIGDTKLAYRLVADHADTPYWRNFGTSRETLVAPSLAW
EEECCCCCCCCCCCCEEEEECCCCCCHHHHEEEECCCCCCCHHHCCCCCCCEEECCCCEE
YGRDTQVVLSYEHRDFLYPFDRGTALDPRTGRPLAIPARERLDEPWNNLVGASNLFQLSA
CCCCCEEEEEECCCCEECCCCCCCCCCCCCCCEEECCHHHHCCCCHHHHCCCCCEEEECC
DQQFSPDWSAHLGYSYDRETYDANQVRITGLNPARGTLTRSNDATHGALSTDSYGVAYVN
CCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEC
GKLRLAGMQHDLQFGVDSEYRRIYRADLLRQAVSVPFNYLNPVYGLIAPSSTVSPPDSDQ
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCCCCCCCCCCCCC
TDKLHSLGLFAQDAVHLTDKWIVSGGVRFMRFSELAGKGRPFVANTNLDGTRWLPRAGIV
HHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEECCCCCCCCCCCCCEE
YQASRTFSLYGSYSKSLKPSSSIATLASGYIIDGATPPEQSTAYEVGAKLDMPGGMTGTL
EEECCEEEEEECCCCCCCCCCHHHHHHCCEEEECCCCCCCCCHHHCCCEECCCCCCEEEE
ALFDIDKKNVLVSQFNDVTKLTDWRTSGRARSRGVELDVSGRIGAHLDLIASYAYLDAKT
EEEECCCCCEEHHHHCCHHHHHCCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHCCCCC
TEDPLYTGNRLWNVARNTASLSAVYDLGTLFGGDDLRIGGATHYVGSRPGDSANSFTLPS
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCEEEECCCCCCCCCCCCCCCH
YLLFDTFATYDTRIGRQRLSFQLNVKNLFNRTYYPSSANRYFVSIGDARQVLLTTTLQF
HHHHHHHHHHHHHHCHHHEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECC
>Mature Secondary Structure 
PSFPDSPIMQPTRTSRSSVFCACRATDSAALVPRRLAGRLAAAALLTALVPPAALAAEA
CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
GEAAAVAARRYAIPAGPLEGALNRFGHEAGILLAFPAEQVAGLRSPGLHGRFDVPQALDQ
CCHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECHHHHCCCCCCCCCCCCCCHHHHHH
LLSGSGLSALRQPSGGYTLVHAAAAAGTAPLPATALATIVVERRAAKADSYRPPREANVT
HHCCCCCHHHHCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RSNAPVLDTAQAVNIVPAQVLRDQKPRNLDDALANVSGITQGNTLAGTQDAIMKRGFGDN
CCCCCCCCCHHHHHCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCC
RDGSIMRNGMPVVQGRALDATADSVEVLKGPASLLYGIMDPGGVVNVLSKVPQLVRSNTV
CCCCEEECCCCEECCCCCCCCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCEE
AVTGETYGHGKNGGDVMLDLTGPIGDTKLAYRLVADHADTPYWRNFGTSRETLVAPSLAW
EEECCCCCCCCCCCCEEEEECCCCCCHHHHEEEECCCCCCCHHHCCCCCCCEEECCCCEE
YGRDTQVVLSYEHRDFLYPFDRGTALDPRTGRPLAIPARERLDEPWNNLVGASNLFQLSA
CCCCCEEEEEECCCCEECCCCCCCCCCCCCCCEEECCHHHHCCCCHHHHCCCCCEEEECC
DQQFSPDWSAHLGYSYDRETYDANQVRITGLNPARGTLTRSNDATHGALSTDSYGVAYVN
CCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEC
GKLRLAGMQHDLQFGVDSEYRRIYRADLLRQAVSVPFNYLNPVYGLIAPSSTVSPPDSDQ
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCCCCCCCCCCCCC
TDKLHSLGLFAQDAVHLTDKWIVSGGVRFMRFSELAGKGRPFVANTNLDGTRWLPRAGIV
HHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCEEEECCCCCCCCCCCCCEE
YQASRTFSLYGSYSKSLKPSSSIATLASGYIIDGATPPEQSTAYEVGAKLDMPGGMTGTL
EEECCEEEEEECCCCCCCCCCHHHHHHCCEEEECCCCCCCCCHHHCCCEECCCCCCEEEE
ALFDIDKKNVLVSQFNDVTKLTDWRTSGRARSRGVELDVSGRIGAHLDLIASYAYLDAKT
EEEECCCCCEEHHHHCCHHHHHCCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHCCCCC
TEDPLYTGNRLWNVARNTASLSAVYDLGTLFGGDDLRIGGATHYVGSRPGDSANSFTLPS
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCEEEECCCCCCCCCCCCCCCH
YLLFDTFATYDTRIGRQRLSFQLNVKNLFNRTYYPSSANRYFVSIGDARQVLLTTTLQF
HHHHHHHHHHHHHHCHHHEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8392140 [H]