Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is fecR [H]
Identifier: 238024611
GI number: 238024611
Start: 1564556
End: 1565545
Strand: Reverse
Name: fecR [H]
Synonym: bglu_2g12260
Alternate gene names: 238024611
Gene position: 1565545-1564556 (Counterclockwise)
Preceding gene: 238024612
Following gene: 238024610
Centisome position: 55.37
GC content: 77.58
Gene sequence:
>990_bases ATGGCGGCCGAACCGAAACCGGCGATTCCGCCGGCAGTCGCGCAGCGCGCCGTGCAATGGTGGGTCGAAACGCAGGGCGC CGATGCCGACGCCGCGGCGCGTGCGGGCCTGGCCCGCTGGCGCGCCGAGCATCCGCTGCACGACGCCGCGTGGCGTCACA TCGAGGCCGTGCAGGGGCGCTTCACGCAGCTTGCCGCCGGGCTGGACGCCGAGGTCGCGCGTGCCGCGCTGCTGCCGGCG CGCGCGCCGGGGCGCCGTGCCGCGATCAAGGCGCTGGCGCTGCTGGTGTTCGCGCTCGGCGGCGTGCGCGCGCTCGATCC GGCGCGGCAGTGGGCCGTCTGGACCGCGGACGCACGCACCGCGGTGGGCGCGCGGCGCCGCATGACGCTGGCCGACGGCA CGCAGGTGGTGCTCGACACCGACAGCGCGATCGACGTGCGCTTCGACGCCGCCACGCGCCGGATCGTGCTGCTGCGCGGC GGGATCATGGTGACGAGCGGCCACGAGCGGCGCCGGCCGGTGCGCCCGCTGGTGGTGGCCGCCGCGCCGGGCGAGCTGGC GCCGCTCGGCACGCGCTTCGCCGCGCGGCTCGACGGCGCCCTGCTGCGGGTGGGCGTGTTCGAGGGCGCCGTGCGCGCGC GGCCCGGCGAACCCGGCGCGGCGCCGCGCGTGATCGCGGCCGGCCAGCGCGCGGCCGTCACGCCCACGGCGGTGAGCGAG CCGCAGCCGCTCGGGCCCGGCGCCGGCGCCTGGGCCGACGGCATGCTGGTGGCCTCGAAGCTGCGCCTGGGCGAGCTGGC CGCCGAGCTGGCCCGCTACCGGCACGGCTACGTGCAGTGCGATCCGGCCGTGGCCGGATTGCGCGTGTCGGGCAGCTATC CGCTCGACGACACCGTCCGCGTGTTCGAGACGCTGCGCGCGACGCTGCCGATCGAGATCGAATACTTCACGCGCTACTGG GTGCGGATCGTGCCGTCGCGCAGCGGCTGA
Upstream 100 bases:
>100_bases GCCGAGATCGCCGCCGAGCTGGGCGTGTCGCTGTCCACGGTCAAGCGCCATCTGGCGCGCGCCGCCGCCCAATGCTTCTT CGCGATGGCGTTCTGAGCCG
Downstream 100 bases:
>100_bases GCGGCCCGCCGCTTGGGCCGCTTGGGCCGCTTGGGCCGGCCCCGAGCGGTCAGGCCGTCCGCCGCCTTTCACAAACTATT TTCAGAAAATCTGAGCTGTT
Product: Fe2+-dicitrate sensor, membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MAAEPKPAIPPAVAQRAVQWWVETQGADADAAARAGLARWRAEHPLHDAAWRHIEAVQGRFTQLAAGLDAEVARAALLPA RAPGRRAAIKALALLVFALGGVRALDPARQWAVWTADARTAVGARRRMTLADGTQVVLDTDSAIDVRFDAATRRIVLLRG GIMVTSGHERRRPVRPLVVAAAPGELAPLGTRFAARLDGALLRVGVFEGAVRARPGEPGAAPRVIAAGQRAAVTPTAVSE PQPLGPGAGAWADGMLVASKLRLGELAAELARYRHGYVQCDPAVAGLRVSGSYPLDDTVRVFETLRATLPIEIEYFTRYW VRIVPSRSG
Sequences:
>Translated_329_residues MAAEPKPAIPPAVAQRAVQWWVETQGADADAAARAGLARWRAEHPLHDAAWRHIEAVQGRFTQLAAGLDAEVARAALLPA RAPGRRAAIKALALLVFALGGVRALDPARQWAVWTADARTAVGARRRMTLADGTQVVLDTDSAIDVRFDAATRRIVLLRG GIMVTSGHERRRPVRPLVVAAAPGELAPLGTRFAARLDGALLRVGVFEGAVRARPGEPGAAPRVIAAGQRAAVTPTAVSE PQPLGPGAGAWADGMLVASKLRLGELAAELARYRHGYVQCDPAVAGLRVSGSYPLDDTVRVFETLRATLPIEIEYFTRYW VRIVPSRSG >Mature_328_residues AAEPKPAIPPAVAQRAVQWWVETQGADADAAARAGLARWRAEHPLHDAAWRHIEAVQGRFTQLAAGLDAEVARAALLPAR APGRRAAIKALALLVFALGGVRALDPARQWAVWTADARTAVGARRRMTLADGTQVVLDTDSAIDVRFDAATRRIVLLRGG IMVTSGHERRRPVRPLVVAAAPGELAPLGTRFAARLDGALLRVGVFEGAVRARPGEPGAAPRVIAAGQRAAVTPTAVSEP QPLGPGAGAWADGMLVASKLRLGELAAELARYRHGYVQCDPAVAGLRVSGSYPLDDTVRVFETLRATLPIEIEYFTRYWV RIVPSRSG
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=317, Percent_Identity=32.4921135646688, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35037; Mature: 34905
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAEPKPAIPPAVAQRAVQWWVETQGADADAAARAGLARWRAEHPLHDAAWRHIEAVQGR CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FTQLAAGLDAEVARAALLPARAPGRRAAIKALALLVFALGGVRALDPARQWAVWTADART HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCHH AVGARRRMTLADGTQVVLDTDSAIDVRFDAATRRIVLLRGGIMVTSGHERRRPVRPLVVA HHHHHHEEEECCCCEEEEECCCCEEEEECCCCEEEEEEECCEEEECCHHHCCCCCCEEEE AAPGELAPLGTRFAARLDGALLRVGVFEGAVRARPGEPGAAPRVIAAGQRAAVTPTAVSE ECCCCCCCCHHHHHHHHCCHHEEEEHHHCHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC PQPLGPGAGAWADGMLVASKLRLGELAAELARYRHGYVQCDPAVAGLRVSGSYPLDDTVR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCHHHHH VFETLRATLPIEIEYFTRYWVRIVPSRSG HHHHHHHHCCEEEHHEEEEEEEEECCCCC >Mature Secondary Structure AAEPKPAIPPAVAQRAVQWWVETQGADADAAARAGLARWRAEHPLHDAAWRHIEAVQGR CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FTQLAAGLDAEVARAALLPARAPGRRAAIKALALLVFALGGVRALDPARQWAVWTADART HHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCHH AVGARRRMTLADGTQVVLDTDSAIDVRFDAATRRIVLLRGGIMVTSGHERRRPVRPLVVA HHHHHHEEEECCCCEEEEECCCCEEEEECCCCEEEEEEECCEEEECCHHHCCCCCCEEEE AAPGELAPLGTRFAARLDGALLRVGVFEGAVRARPGEPGAAPRVIAAGQRAAVTPTAVSE ECCCCCCCCHHHHHHHHCCHHEEEEHHHCHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC PQPLGPGAGAWADGMLVASKLRLGELAAELARYRHGYVQCDPAVAGLRVSGSYPLDDTVR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCHHHHH VFETLRATLPIEIEYFTRYWVRIVPSRSG HHHHHHHHCCEEEHHEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]