Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024604
Identifier: 238024604
GI number: 238024604
Start: 1554651
End: 1555874
Strand: Reverse
Name: 238024604
Synonym: bglu_2g12190
Alternate gene names: NA
Gene position: 1555874-1554651 (Counterclockwise)
Preceding gene: 238024610
Following gene: 238024603
Centisome position: 55.03
GC content: 71.16
Gene sequence:
>1224_bases ATGAAGAAGAAATCGCTTGCGATGTTCGTTCGCCCGCGGCGCCGTGCCGGTGAACTGGCCGCCCGGCGCAACCGAAAGAT GGCGCGTTCGGTGCACGCCTACGTGCGCGGCAACACGGCCCGCTATTACGAGTGGCTCGAGAACGCCAAGGTGGGCACGC TGCCGGAGGGGCCGGCCATCTGGATCTGCGGCGACTGCCACACCGGCAATCTCGGCCCGGTGGCGAACGACGCCGGCGAG ATCGAGATCCAGATCCGCGATCTCGACCAGACCGTGATCGGCAACCCGGTCCACGACCTGATCCGGCTCAGCCTGTCGCT GGCCACCGCCGCGCGCAGCTCGGATCTGCCCGGCATCGTCACCGCCCGCATCATCGAGGAAGTGCACGAGGGCTACACGC GTGCGCTGGCGGGCGGCAAGCGCCGCGCCGCGGCGATCCCGAAGCCCGACGTGGTGCGGATCGTGATGCGCGACGCGCTC GAGCGCACCTGGAAGCACCTCGCGCGCGAGCGGCTGATGGGCGTGAAGCCCGAGCTGCCGCTCGGCAAGCGGTTCTGGCC GCTGTCGGCGGCCGAGGCGCGCGGGATCGCGGCGCTGGCCGCCTCGCCCGAGATCGCCGAACTCGCGACCGGGCTGCGCG GCCACCGTCCCGGCGAGCAGGTCGAACTGCTCGACGCGGCCTACTGGGTGAAAGGCTGCAGTTCGCTCGGGCGGCTGCGC TACGCCGTGCTGCTCGACGTGGACGGCGCGGCCTCCGACGGCGACGATCTCTGCCTCATCGACATCAAGGAAGGCACCAC CGCGCTCGCGCCGCGCTATCGCGACAGCGAGATGCCGCGCGACAACGGCCGGCGCGTGGTGGAGGGCGCGCGCCACCTGT CGCCGCATCTGGGCAACCGCATGTGCGCGGCCACGCTCGCCGACCGCTCGGTGATCGTGCGCGAGCTGCTGCCGGCCGAT CTGAAGCTCGAGATCGGCAGCGTCGACGAGGTCGAGGCGCGCCGCATCGCGCGTTATCTGGCCTACGTGGTGGGCGTCGC GCACGCCCGGCAGATGGATGCGGCCACGCGCAAGCGCTGGCTCGCCGAACTGAAGCGGGTACGCTCGAAGACGATCGACG CGCCGTTCTGGCTCTGGCGCAGCGTGATCGAGCTGATGGGCAGCCACGAGGTGGGCTACCTCGAACACTGCCGGCGCGTG GCCGCGCAGCACGGCCAGGCGTGA
Upstream 100 bases:
>100_bases CTGTCGAATCGGGTCGGATGTGCTTATATTGCCGGATGTCCCGCGCCGCTGGCGCGCGGGCGCCGGTCCTCCCCATCAAG TCCTGCATCGAGGCAACGCA
Downstream 100 bases:
>100_bases GGCGGGCGCGGCGCCGGGAAGGCCGGCACGCGACCACGGGAACCGGGCGGGAGCGATCGGACCATGAAGACCTTTCATTG CGGTAACTGCACGCAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKKKSLAMFVRPRRRAGELAARRNRKMARSVHAYVRGNTARYYEWLENAKVGTLPEGPAIWICGDCHTGNLGPVANDAGE IEIQIRDLDQTVIGNPVHDLIRLSLSLATAARSSDLPGIVTARIIEEVHEGYTRALAGGKRRAAAIPKPDVVRIVMRDAL ERTWKHLARERLMGVKPELPLGKRFWPLSAAEARGIAALAASPEIAELATGLRGHRPGEQVELLDAAYWVKGCSSLGRLR YAVLLDVDGAASDGDDLCLIDIKEGTTALAPRYRDSEMPRDNGRRVVEGARHLSPHLGNRMCAATLADRSVIVRELLPAD LKLEIGSVDEVEARRIARYLAYVVGVAHARQMDAATRKRWLAELKRVRSKTIDAPFWLWRSVIELMGSHEVGYLEHCRRV AAQHGQA
Sequences:
>Translated_407_residues MKKKSLAMFVRPRRRAGELAARRNRKMARSVHAYVRGNTARYYEWLENAKVGTLPEGPAIWICGDCHTGNLGPVANDAGE IEIQIRDLDQTVIGNPVHDLIRLSLSLATAARSSDLPGIVTARIIEEVHEGYTRALAGGKRRAAAIPKPDVVRIVMRDAL ERTWKHLARERLMGVKPELPLGKRFWPLSAAEARGIAALAASPEIAELATGLRGHRPGEQVELLDAAYWVKGCSSLGRLR YAVLLDVDGAASDGDDLCLIDIKEGTTALAPRYRDSEMPRDNGRRVVEGARHLSPHLGNRMCAATLADRSVIVRELLPAD LKLEIGSVDEVEARRIARYLAYVVGVAHARQMDAATRKRWLAELKRVRSKTIDAPFWLWRSVIELMGSHEVGYLEHCRRV AAQHGQA >Mature_407_residues MKKKSLAMFVRPRRRAGELAARRNRKMARSVHAYVRGNTARYYEWLENAKVGTLPEGPAIWICGDCHTGNLGPVANDAGE IEIQIRDLDQTVIGNPVHDLIRLSLSLATAARSSDLPGIVTARIIEEVHEGYTRALAGGKRRAAAIPKPDVVRIVMRDAL ERTWKHLARERLMGVKPELPLGKRFWPLSAAEARGIAALAASPEIAELATGLRGHRPGEQVELLDAAYWVKGCSSLGRLR YAVLLDVDGAASDGDDLCLIDIKEGTTALAPRYRDSEMPRDNGRRVVEGARHLSPHLGNRMCAATLADRSVIVRELLPAD LKLEIGSVDEVEARRIARYLAYVVGVAHARQMDAATRKRWLAELKRVRSKTIDAPFWLWRSVIELMGSHEVGYLEHCRRV AAQHGQA
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45086; Mature: 45086
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKSLAMFVRPRRRAGELAARRNRKMARSVHAYVRGNTARYYEWLENAKVGTLPEGPAI CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEE WICGDCHTGNLGPVANDAGEIEIQIRDLDQTVIGNPVHDLIRLSLSLATAARSSDLPGIV EEEECCCCCCCCCCCCCCCEEEEEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH TARIIEEVHEGYTRALAGGKRRAAAIPKPDVVRIVMRDALERTWKHLARERLMGVKPELP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LGKRFWPLSAAEARGIAALAASPEIAELATGLRGHRPGEQVELLDAAYWVKGCSSLGRLR CCCCCCCCCHHHHCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEE YAVLLDVDGAASDGDDLCLIDIKEGTTALAPRYRDSEMPRDNGRRVVEGARHLSPHLGNR EEEEEEECCCCCCCCCEEEEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCH MCAATLADRSVIVRELLPADLKLEIGSVDEVEARRIARYLAYVVGVAHARQMDAATRKRW HHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAELKRVRSKTIDAPFWLWRSVIELMGSHEVGYLEHCRRVAAQHGQA HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKKKSLAMFVRPRRRAGELAARRNRKMARSVHAYVRGNTARYYEWLENAKVGTLPEGPAI CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEE WICGDCHTGNLGPVANDAGEIEIQIRDLDQTVIGNPVHDLIRLSLSLATAARSSDLPGIV EEEECCCCCCCCCCCCCCCEEEEEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHH TARIIEEVHEGYTRALAGGKRRAAAIPKPDVVRIVMRDALERTWKHLARERLMGVKPELP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LGKRFWPLSAAEARGIAALAASPEIAELATGLRGHRPGEQVELLDAAYWVKGCSSLGRLR CCCCCCCCCHHHHCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEE YAVLLDVDGAASDGDDLCLIDIKEGTTALAPRYRDSEMPRDNGRRVVEGARHLSPHLGNR EEEEEEECCCCCCCCCEEEEEECCCCCHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCH MCAATLADRSVIVRELLPADLKLEIGSVDEVEARRIARYLAYVVGVAHARQMDAATRKRW HHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAELKRVRSKTIDAPFWLWRSVIELMGSHEVGYLEHCRRVAAQHGQA HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA