Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024579
Identifier: 238024579
GI number: 238024579
Start: 1515414
End: 1517399
Strand: Reverse
Name: 238024579
Synonym: bglu_2g11900
Alternate gene names: NA
Gene position: 1517399-1515414 (Counterclockwise)
Preceding gene: 238024580
Following gene: 238024578
Centisome position: 53.67
GC content: 65.86
Gene sequence:
>1986_bases ATGGGGCCGGTCGCCGACGCGTCGGTGAGCGCCTACGCAATCGCACCGGACGGCACCGTGGCCGACACGGCGCTCGCAAC GGGGAGCACGCGCGCCGACGGCACGTTTTCCCTGCCTGGCAGCCTGCGCTACCCCGTGCTGATTCGGGCGACGGGGGGCG TCTATGAAGAGGAAGCGACGGGGCAAAAGGCAGCCATGCAGGGCGAGATCGACGCCGTCTATCTTAGCGCGCCGTCGCAG ATGGTCGTGTCGGTCTATTCGAATGCGGTGGTCGCGGGCGCGCGAGCCGCGGGCGGCCTCACTTCCAGCAACGTCGCCGC TGCGATATCGCGCGTGAACGCCTTCGCTGGCGACATCGATGTTCAGCAAACGGCGCCGGCCTTCGTCACGGCGAATACCG CCAATGCGGCGAGCGGATCGACTGCCGTGTCGAACGGCGCGAAGATGGCGCTCGCGCTCGGCGCCGAATCGCAGAGCCGG ACCTCGATGGGGGGTTCCATTGCCGACAGCACGCAAGCGATCGTTAGCCAGTCCGCGAACGGCGACACGCTTGCCGAATG CAACACGGGCGCGGGCAATCCGTCGGACGACGGCACGCTCGCGGCACCGGCCGGCTCCACCTGTGCGATCAGCACCGGCG CGGCGGGATTCGTCGGCAATCCCCGCAATCGCTCGGGCATCACGTCGCTCGCAGCGCTCGCGCCGATCATTCCGGGCAAG CCGGCCAATATCACGCTCAGCAGCGAGGCGTGCCGCGACCGCATCGCGCTGTACAGAGAGCAATATTCGCTGTTCACGAG CCGCCGTGACGATGTCCAGGCACGACTGGGCGGCAAGCTGACGGCCGCCAACTGGGCGAGCTTCCCTGACGCGGGCTCGT GGGGGCCGCGCGCCGCGCAGTACGGCGCCATCGCCGCCGCTTCATGCGCGGCCGACGGCGCCACCTTCCAGCGTGAGCTG TTGATGGCCGTCGAGAACTACTGGATCGACCAGAACCTGAACTATTGCCACCATCACATCCCTGCCTGGTTGCCACCCGC CACCCGGCCCTCGTACTTCAACTCGACCCTCGGCTCGTCGAAGCTGACCTGCGCGCCGAATCGCCAGCGCAACGGTGCCC AGACGTCCACGCCACTCGCCGATGCCGATATCAAATGGCAGGGCGTCGACTGCTCGGACTTCACCTCGTGGGCCTACAAC TTCGCGGGCGTTACGCACGCGAGCGGCAATCTGCAGACGGGCATCGGCACGCAGGCATGTTCGATCGGCGCCGATCCGCT GGTGTCCGTCACCGATCAGGCGGGCGTCTTGCTCGACATCAACCAGGACAACATCGCACAACTGGTCGATCGCTTGCGGC CCGGCGACCTGTTGTACATCACGGAATCCGCGCAGCCGCAATCTTCGCCGGCGAACGTGGCCTCCGGCTTCGTGGTTTCG CACGTGGTGACATGGACGGGGATGCGCTTCAGCGATCTGCGCAACGGGCCGGAAGGCCAGTACTACGATCCCGCGACGGC CGGCCAGCTGGGCTCGCGGCTCGGCGGCGATTTCGCGAAGTTCTTCACGCGGGCCGACGGTTCGAAGACGAAGGTCGATC TATCGCAACTGGGTACCGCGGACATGGATCCCTGGATGATCATCGACAGCCACTTCGCCGGGCCTGCGTATCGCCCGTTT ATCCTGAAGACGTCGAAGCTGGGTGCGGACTGGTATGTAAAGAGCCTGTCGAACGTACGCCGTATCATCGACGCCGACTC GGCCCGCAGCGATCCAGACCTCGCGCCGCTCATCATCACGAAAGAAGCAACGTCGCAAGGGCAATTCGGCACCATGGTCA CCTTGAGCTCGCAGCAGTCGCGTAACTCGTCAGCGGGCCACAAGCTCGTCTATCAGATCTCCGGCGCAAGCGGTACGCCG ACATGCTATCGCGTCGCGGCGAAGGCCTTCGACGCCTCGAACGTTTCGACAGGGTTGGCCAAGTAA
Upstream 100 bases:
>100_bases GAAACCAGCCCAACTGACCGCCGCCACCAGCGCGGCGCTTGCCCTTTTCCTGTCCGCCTGCGGCGGAAGCAGCCTGCCAT CGACGTCAGGCGCGGTATAC
Downstream 100 bases:
>100_bases GGCGCTGCCGCCGCGCCCTGCGGTGCCGCCTCGCAGCGGCCCGGCGTGGCGGGCGGCAGAGGGACGGCATCGCTAATTCA ACGGCATTTCCATGATTCAC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MGPVADASVSAYAIAPDGTVADTALATGSTRADGTFSLPGSLRYPVLIRATGGVYEEEATGQKAAMQGEIDAVYLSAPSQ MVVSVYSNAVVAGARAAGGLTSSNVAAAISRVNAFAGDIDVQQTAPAFVTANTANAASGSTAVSNGAKMALALGAESQSR TSMGGSIADSTQAIVSQSANGDTLAECNTGAGNPSDDGTLAAPAGSTCAISTGAAGFVGNPRNRSGITSLAALAPIIPGK PANITLSSEACRDRIALYREQYSLFTSRRDDVQARLGGKLTAANWASFPDAGSWGPRAAQYGAIAAASCAADGATFQREL LMAVENYWIDQNLNYCHHHIPAWLPPATRPSYFNSTLGSSKLTCAPNRQRNGAQTSTPLADADIKWQGVDCSDFTSWAYN FAGVTHASGNLQTGIGTQACSIGADPLVSVTDQAGVLLDINQDNIAQLVDRLRPGDLLYITESAQPQSSPANVASGFVVS HVVTWTGMRFSDLRNGPEGQYYDPATAGQLGSRLGGDFAKFFTRADGSKTKVDLSQLGTADMDPWMIIDSHFAGPAYRPF ILKTSKLGADWYVKSLSNVRRIIDADSARSDPDLAPLIITKEATSQGQFGTMVTLSSQQSRNSSAGHKLVYQISGASGTP TCYRVAAKAFDASNVSTGLAK
Sequences:
>Translated_661_residues MGPVADASVSAYAIAPDGTVADTALATGSTRADGTFSLPGSLRYPVLIRATGGVYEEEATGQKAAMQGEIDAVYLSAPSQ MVVSVYSNAVVAGARAAGGLTSSNVAAAISRVNAFAGDIDVQQTAPAFVTANTANAASGSTAVSNGAKMALALGAESQSR TSMGGSIADSTQAIVSQSANGDTLAECNTGAGNPSDDGTLAAPAGSTCAISTGAAGFVGNPRNRSGITSLAALAPIIPGK PANITLSSEACRDRIALYREQYSLFTSRRDDVQARLGGKLTAANWASFPDAGSWGPRAAQYGAIAAASCAADGATFQREL LMAVENYWIDQNLNYCHHHIPAWLPPATRPSYFNSTLGSSKLTCAPNRQRNGAQTSTPLADADIKWQGVDCSDFTSWAYN FAGVTHASGNLQTGIGTQACSIGADPLVSVTDQAGVLLDINQDNIAQLVDRLRPGDLLYITESAQPQSSPANVASGFVVS HVVTWTGMRFSDLRNGPEGQYYDPATAGQLGSRLGGDFAKFFTRADGSKTKVDLSQLGTADMDPWMIIDSHFAGPAYRPF ILKTSKLGADWYVKSLSNVRRIIDADSARSDPDLAPLIITKEATSQGQFGTMVTLSSQQSRNSSAGHKLVYQISGASGTP TCYRVAAKAFDASNVSTGLAK >Mature_660_residues GPVADASVSAYAIAPDGTVADTALATGSTRADGTFSLPGSLRYPVLIRATGGVYEEEATGQKAAMQGEIDAVYLSAPSQM VVSVYSNAVVAGARAAGGLTSSNVAAAISRVNAFAGDIDVQQTAPAFVTANTANAASGSTAVSNGAKMALALGAESQSRT SMGGSIADSTQAIVSQSANGDTLAECNTGAGNPSDDGTLAAPAGSTCAISTGAAGFVGNPRNRSGITSLAALAPIIPGKP ANITLSSEACRDRIALYREQYSLFTSRRDDVQARLGGKLTAANWASFPDAGSWGPRAAQYGAIAAASCAADGATFQRELL MAVENYWIDQNLNYCHHHIPAWLPPATRPSYFNSTLGSSKLTCAPNRQRNGAQTSTPLADADIKWQGVDCSDFTSWAYNF AGVTHASGNLQTGIGTQACSIGADPLVSVTDQAGVLLDINQDNIAQLVDRLRPGDLLYITESAQPQSSPANVASGFVVSH VVTWTGMRFSDLRNGPEGQYYDPATAGQLGSRLGGDFAKFFTRADGSKTKVDLSQLGTADMDPWMIIDSHFAGPAYRPFI LKTSKLGADWYVKSLSNVRRIIDADSARSDPDLAPLIITKEATSQGQFGTMVTLSSQQSRNSSAGHKLVYQISGASGTPT CYRVAAKAFDASNVSTGLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68430; Mature: 68299
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPVADASVSAYAIAPDGTVADTALATGSTRADGTFSLPGSLRYPVLIRATGGVYEEEAT CCCCCCCCCEEEEECCCCCCHHHEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCC GQKAAMQGEIDAVYLSAPSQMVVSVYSNAVVAGARAAGGLTSSNVAAAISRVNAFAGDID CCHHHCCCCCCEEEECCCHHHHHHHHHCHHEECCHHCCCCCCHHHHHHHHHHHHHHCCCC VQQTAPAFVTANTANAASGSTAVSNGAKMALALGAESQSRTSMGGSIADSTQAIVSQSAN CCCCCCEEEEECCCCCCCCCCHHCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHCCCC GDTLAECNTGAGNPSDDGTLAAPAGSTCAISTGAAGFVGNPRNRSGITSLAALAPIIPGK CCEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC PANITLSSEACRDRIALYREQYSLFTSRRDDVQARLGGKLTAANWASFPDAGSWGPRAAQ CCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCHHH YGAIAAASCAADGATFQRELLMAVENYWIDQNLNYCHHHIPAWLPPATRPSYFNSTLGSS HCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCC KLTCAPNRQRNGAQTSTPLADADIKWQGVDCSDFTSWAYNFAGVTHASGNLQTGIGTQAC EEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEECCCCCCCCCCCCHH SIGADPLVSVTDQAGVLLDINQDNIAQLVDRLRPGDLLYITESAQPQSSPANVASGFVVS CCCCCCCEEECCCCCEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH HVVTWTGMRFSDLRNGPEGQYYDPATAGQLGSRLGGDFAKFFTRADGSKTKVDLSQLGTA HHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEHHHCCCC DMDPWMIIDSHFAGPAYRPFILKTSKLGADWYVKSLSNVRRIIDADSARSDPDLAPLIIT CCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE KEATSQGQFGTMVTLSSQQSRNSSAGHKLVYQISGASGTPTCYRVAAKAFDASNVSTGLA ECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC K C >Mature Secondary Structure GPVADASVSAYAIAPDGTVADTALATGSTRADGTFSLPGSLRYPVLIRATGGVYEEEAT CCCCCCCCEEEEECCCCCCHHHEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCC GQKAAMQGEIDAVYLSAPSQMVVSVYSNAVVAGARAAGGLTSSNVAAAISRVNAFAGDID CCHHHCCCCCCEEEECCCHHHHHHHHHCHHEECCHHCCCCCCHHHHHHHHHHHHHHCCCC VQQTAPAFVTANTANAASGSTAVSNGAKMALALGAESQSRTSMGGSIADSTQAIVSQSAN CCCCCCEEEEECCCCCCCCCCHHCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHCCCC GDTLAECNTGAGNPSDDGTLAAPAGSTCAISTGAAGFVGNPRNRSGITSLAALAPIIPGK CCEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC PANITLSSEACRDRIALYREQYSLFTSRRDDVQARLGGKLTAANWASFPDAGSWGPRAAQ CCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCHHH YGAIAAASCAADGATFQRELLMAVENYWIDQNLNYCHHHIPAWLPPATRPSYFNSTLGSS HCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCC KLTCAPNRQRNGAQTSTPLADADIKWQGVDCSDFTSWAYNFAGVTHASGNLQTGIGTQAC EEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCEEECCCCCCCCCCCCHH SIGADPLVSVTDQAGVLLDINQDNIAQLVDRLRPGDLLYITESAQPQSSPANVASGFVVS CCCCCCCEEECCCCCEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH HVVTWTGMRFSDLRNGPEGQYYDPATAGQLGSRLGGDFAKFFTRADGSKTKVDLSQLGTA HHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEHHHCCCC DMDPWMIIDSHFAGPAYRPFILKTSKLGADWYVKSLSNVRRIIDADSARSDPDLAPLIIT CCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE KEATSQGQFGTMVTLSSQQSRNSSAGHKLVYQISGASGTPTCYRVAAKAFDASNVSTGLA ECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA