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The map label for this gene is tcp [H]

Identifier: 238024580

GI number: 238024580

Start: 1518576

End: 1520297

Strand: Reverse

Name: tcp [H]

Synonym: bglu_2g11910

Alternate gene names: 238024580

Gene position: 1520297-1518576 (Counterclockwise)

Preceding gene: 238024581

Following gene: 238024579

Centisome position: 53.77

GC content: 66.38

Gene sequence:

>1722_bases
ATGAAAAACATGACTGTATCCACCCGCCTGATCGCCGGCTTCGGGTTGTTGACCGCCTTGTTGCTGGCAGTGGCGGCGAT
CGGTTTTTATGGCCTGTCGCAATTGAATGGGAGGCTGGACGATATCGCGCGCGTGAACAATACCGAGGCGCAGCTGGCTA
ACCAGTTGCGCGCCTCGATACAGGATCGGGCAGTCGCGGTGCGGAACCTGGCCTTGCTCAGCGACGCGCAGGATATGGCC
AAGGAGGCCGAGCGCATCAGCAAGCAGGAGCAGATCTATGCCGACGCGTACCAGAAGCTGTCGCAGATGTTTGCGAACGG
ACCCGGCACCACCGAGCGGGAGAAGACACTGATCGCGCAGCTCAAGCAGGACGAGGCGATGACGCTGCCTGCATTGCGCC
AGGCGATCCAACTGGGCTTGTCCAACGACATGGCCGGCGCGACCCGGGAACTGCTGCGCAGTGTCAGGCCGCTGCAACAG
ACGTGGCTGGCACGCTCGGTCGAGCTGGCTGACTTCGAGGACCAGCTCAATGGCCAGGCGCAACGGGGCGCCGCGAGCCT
GTACTCGAGCGTGCGGGAGCTGATCGGGGCCATCGTCACGGCCTCGCTGCTGGTGGCGGCCGTGACCGCGATCCTCATTA
CGCGCAGCATCCTGAGGCAGCTTGGCGGCGAACCCGTTTTCGCGCAGTCGGTGGCGGCGGAGATCGCCAATGGCAACCTG
ATGGTGGACCTGCATCTGAAGCCCGGCGATTCGACCAGCCTGATGGCCTCGCTGGAATCGATGCGCGCCAGGCTGACCTC
GATCGTGCACGGCATCAAGACCTCGGCCGAATCGATCTCGGTTGCCGCCAACGAGGTTGCCCAGGGCAATGTGGATCTCT
CCCAGCGCACCGAGGAACAGGCGGCATCGCTCGAAGAGACGGCGGCCAGCATGGAGGAACTGACCTCGACGGTGAAGCAC
AACACCGACAATGCCCGGCAGGGCAGCACGCTCGCGGTCACGGCTTCGCGGACCGCTACGTCGGGCGGTGACGTGGTTCA
GCAGGTGATGGGCACCATGGATGACATCACGTCGAGCTCGCGCAAGGTTGCCGAGATCATTTCCGTGATCGAGGGCATTG
CCTTCCAGACCAATATCCTGGCGCTCAACGCGGCGGTCGAGTCGGCGCGCGCGGGCGAACAGGGGCGCGGCTTCGCGGTG
GTCGCCGGGGAGGTGCGCACGCTGGCACAGCGCAGCGCGGTGGCGGCCAAGGAAATCAAGGAACTGATCGAGACGTCGGT
ATCGCATGTGGCAGCCGGCTCGCAATTGGTGGCCGGTGCCGGCACGACCATGGACGAGATCGTGCGCTCGGTGAAGCGGG
TCAGCGACATCATGGGCGAGATCGCGTCGGCGTCGGCGGAGCAGAGCACGGGAATCGAGCAGGTCAACGTGGCGGTGGCG
CAGATGGACGAGGTCACCCAGCAGAACGCGGCGCTGGTGGAGCAGGCCACGGCCGCGGCGCAGTCGATGGCGGATCAGGC
GGAAAATCTGCGGGCCACGGTGTCGATCTTCCGGGTCGATGCGAGGGTGCAGACGGAGCCCGCCGCCGCCGTGAAGCGGC
AGGTGAGCGTCGCGCCGAAGCAGGCCAAGCGCCGTCCCGAGCCGGCACGGCTGCCGGCGCGGGCGCTCGCGCCGACGGCC
GCCGCGGCCGGGGTGGGAAACGGCGAGTGGGCCACGTTCTGA

Upstream 100 bases:

>100_bases
CATCGAGGACTTAATTACAGGGTCTTCCCAGCCCTAAGTCTTTTCGCAGGACAGTCGTAAACAAGGTGGAAGAATAACTT
GAGACGGTCTGGGAGCCGCA

Downstream 100 bases:

>100_bases
CGCGCAGGCAGGAGCGCGGTCGGCATGGGCGACCCGGCTGGCCAGCGTAACGCGCCGCGGCCGTTCGCTTCCGGCTTGGG
CCGGGAGCAGGGAAGTGCCA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 573; Mature: 573

Protein sequence:

>573_residues
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGRLDDIARVNNTEAQLANQLRASIQDRAVAVRNLALLSDAQDMA
KEAERISKQEQIYADAYQKLSQMFANGPGTTEREKTLIAQLKQDEAMTLPALRQAIQLGLSNDMAGATRELLRSVRPLQQ
TWLARSVELADFEDQLNGQAQRGAASLYSSVRELIGAIVTASLLVAAVTAILITRSILRQLGGEPVFAQSVAAEIANGNL
MVDLHLKPGDSTSLMASLESMRARLTSIVHGIKTSAESISVAANEVAQGNVDLSQRTEEQAASLEETAASMEELTSTVKH
NTDNARQGSTLAVTASRTATSGGDVVQQVMGTMDDITSSSRKVAEIISVIEGIAFQTNILALNAAVESARAGEQGRGFAV
VAGEVRTLAQRSAVAAKEIKELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARVQTEPAAAVKRQVSVAPKQAKRRPEPARLPARALAPTA
AAAGVGNGEWATF

Sequences:

>Translated_573_residues
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGRLDDIARVNNTEAQLANQLRASIQDRAVAVRNLALLSDAQDMA
KEAERISKQEQIYADAYQKLSQMFANGPGTTEREKTLIAQLKQDEAMTLPALRQAIQLGLSNDMAGATRELLRSVRPLQQ
TWLARSVELADFEDQLNGQAQRGAASLYSSVRELIGAIVTASLLVAAVTAILITRSILRQLGGEPVFAQSVAAEIANGNL
MVDLHLKPGDSTSLMASLESMRARLTSIVHGIKTSAESISVAANEVAQGNVDLSQRTEEQAASLEETAASMEELTSTVKH
NTDNARQGSTLAVTASRTATSGGDVVQQVMGTMDDITSSSRKVAEIISVIEGIAFQTNILALNAAVESARAGEQGRGFAV
VAGEVRTLAQRSAVAAKEIKELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARVQTEPAAAVKRQVSVAPKQAKRRPEPARLPARALAPTA
AAAGVGNGEWATF
>Mature_573_residues
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGRLDDIARVNNTEAQLANQLRASIQDRAVAVRNLALLSDAQDMA
KEAERISKQEQIYADAYQKLSQMFANGPGTTEREKTLIAQLKQDEAMTLPALRQAIQLGLSNDMAGATRELLRSVRPLQQ
TWLARSVELADFEDQLNGQAQRGAASLYSSVRELIGAIVTASLLVAAVTAILITRSILRQLGGEPVFAQSVAAEIANGNL
MVDLHLKPGDSTSLMASLESMRARLTSIVHGIKTSAESISVAANEVAQGNVDLSQRTEEQAASLEETAASMEELTSTVKH
NTDNARQGSTLAVTASRTATSGGDVVQQVMGTMDDITSSSRKVAEIISVIEGIAFQTNILALNAAVESARAGEQGRGFAV
VAGEVRTLAQRSAVAAKEIKELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARVQTEPAAAVKRQVSVAPKQAKRRPEPARLPARALAPTA
AAAGVGNGEWATF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=309, Percent_Identity=59.546925566343, Blast_Score=300, Evalue=2e-82,
Organism=Escherichia coli, GI1788195, Length=315, Percent_Identity=57.7777777777778, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1788194, Length=535, Percent_Identity=41.8691588785047, Blast_Score=296, Evalue=3e-81,
Organism=Escherichia coli, GI1787690, Length=342, Percent_Identity=50.8771929824561, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=40.6374501992032, Blast_Score=191, Evalue=8e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 60409; Mature: 60409

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00368 RIBORED_SMALL ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGRLDDIARVNNTEAQLANQLRASI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHH
QDRAVAVRNLALLSDAQDMAKEAERISKQEQIYADAYQKLSQMFANGPGTTEREKTLIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LKQDEAMTLPALRQAIQLGLSNDMAGATRELLRSVRPLQQTWLARSVELADFEDQLNGQA
HHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHH
QRGAASLYSSVRELIGAIVTASLLVAAVTAILITRSILRQLGGEPVFAQSVAAEIANGNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
MVDLHLKPGDSTSLMASLESMRARLTSIVHGIKTSAESISVAANEVAQGNVDLSQRTEEQ
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHH
AASLEETAASMEELTSTVKHNTDNARQGSTLAVTASRTATSGGDVVQQVMGTMDDITSSS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCH
RKVAEIISVIEGIAFQTNILALNAAVESARAGEQGRGFAVVAGEVRTLAQRSAVAAKEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHH
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARVQTEPAAAVKRQVSVAPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHCCCHHHHHHHHHHCCCH
QAKRRPEPARLPARALAPTAAAAGVGNGEWATF
HHHCCCCCCCCCHHHHCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKNMTVSTRLIAGFGLLTALLLAVAAIGFYGLSQLNGRLDDIARVNNTEAQLANQLRASI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHH
QDRAVAVRNLALLSDAQDMAKEAERISKQEQIYADAYQKLSQMFANGPGTTEREKTLIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LKQDEAMTLPALRQAIQLGLSNDMAGATRELLRSVRPLQQTWLARSVELADFEDQLNGQA
HHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHH
QRGAASLYSSVRELIGAIVTASLLVAAVTAILITRSILRQLGGEPVFAQSVAAEIANGNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
MVDLHLKPGDSTSLMASLESMRARLTSIVHGIKTSAESISVAANEVAQGNVDLSQRTEEQ
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHH
AASLEETAASMEELTSTVKHNTDNARQGSTLAVTASRTATSGGDVVQQVMGTMDDITSSS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCH
RKVAEIISVIEGIAFQTNILALNAAVESARAGEQGRGFAVVAGEVRTLAQRSAVAAKEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ELIETSVSHVAAGSQLVAGAGTTMDEIVRSVKRVSDIMGEIASASAEQSTGIEQVNVAVA
HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHH
QMDEVTQQNAALVEQATAAAQSMADQAENLRATVSIFRVDARVQTEPAAAVKRQVSVAPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHCCCHHHHHHHHHHCCCH
QAKRRPEPARLPARALAPTAAAAGVGNGEWATF
HHHCCCCCCCCCHHHHCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]