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The map label for this gene is aer [H]

Identifier: 238024578

GI number: 238024578

Start: 1512781

End: 1514340

Strand: Reverse

Name: aer [H]

Synonym: bglu_2g11890

Alternate gene names: 238024578

Gene position: 1514340-1512781 (Counterclockwise)

Preceding gene: 238024579

Following gene: 238024577

Centisome position: 53.56

GC content: 65.19

Gene sequence:

>1560_bases
ATGCGAAACAATCTCCCGGTGACAGGTGTCGAATTCGATTATCCCGAAACCAGCATGCTGGTTTCGGCTACCGATCTCTC
CAGTCGAATCGAATACTGCAATCCGGCTTTCGTCGAGGTTTCGGGGTTTTCCCGCGAGGAACTCATCGGCCAGCCACACA
ATCTCATCCGCCACCCCAGCATGCCGCCCCAGGCGTTTGAAGACATGTGGGCAACCATCAAGGCCGGGCGCTCATGGACG
GCGCTGGTGAAGAATCGCCGCAAAAACGGCGACCACTATTGGGTCCGCGCCAATGTCACGCCGATCATGCGGCGCGGAAA
GACAGTGGGCTATCTGAGCGTTCGCACCAAACCGCGCCGCGACGAGATCCGCGAAGCGGAGGCGCTCTACGCTCGGCTGA
ACAGCGGAGCTCATCACGGCGTGCGCCTGCGCCGCGGGCAGGTCGTGCGCCCAGGCCTGTTGCATGTGTTCGACCTCTGG
CGCGGGGCCGGGCTGCCCGCGCATATCGCGGCAGCCGGTGCGGCCGGTATGGCGGCCATTGCGTCGCTTCTCGCGGTCGC
GGACCGGCTCTCGGGTTCGGCATTGTTATCGCTGGCGCTCGCGGCGTCCGCCGTCGGCACGGGGCTGCCGGCATTGCTGG
TGGCCAGGCGCGCCCAGCAGCGGATTGCCGAATTGGAGCAGATCGGCGGCCGGATCGCCGCCGGCGATCTGACCGTCGAC
GTGCCGGTTGCGGCGGGGGCCTGCACGAGCGGGACCTTGCGGGCCTTGGCGCAGTTGCGCGTGAGCCTCGTCGCGATCGT
GTCCGACGTGCGGATGCAGATCGATCAGATGAAGTCGGTCTCACAGGAAGTGGCCAGAGGCAATATCGACCTGTCACGGC
GGACCGAAGTGCAGGCCGCATCGCTGCAGGAAACGGCGGCGTCGCTCGAGCAATTGACCGCCACGGTGAAGAGCAACTCG
CAGGCGGCCACGCAGGCCAACACCATGGTCGGAGGCGCGCAAGCCGCGACGCGCGGTGGCTGCGAGGCCATCCAACGCAC
CGAGTCGACGATGCGCGGTATTTCCGATTCGTCGGACCAGATTCGGGCCATCGTGACGACCATCGACAGCATCGCGTTCC
AGACCAACATACTCGCGCTGAACGCCGCCGTGGAAGCCGCCCGCGCGGGCGAAGCGGGCAAGGGCTTCGCCGTGGTGGCG
AGCGAGGTGCGGAATCTGGCGCAGCGCTGTGCCACGGCCGCGCGGGAAATCAAGGGAATCGCCGATACCAACGCCACGGC
GGCGATTGCCGCGTGCGATAGCGTTTCCGGCACCGCGGGCCGTATGGTGGAAATCGAATCGAACATGCAGCAGGTGTTTT
CGATCGTGCAATCGATCGTTACCGCCAGCGTCGAGCAGTCTCAAGGCATCGATAGCATCAACAACTCGGTGACGCAGCTT
GATAGCGCGACGCAGCAGAACGCCGCGCTCGTTGAAGAAGGCGCGACGACGGCGGGAAGCCTTGCGAGCCAGGCCAACGT
GCTCGATGAAGCGGTGCGCCTGTTCACGCTACCGGATTGA

Upstream 100 bases:

>100_bases
TGCGGGAAGACATCGCGACGATTTTGTCGAATCGCGAATGCGTGGCAACGAGAGAGCATGGCTGATCTGACCGGCGGCTC
GAATAACGAATGAGGACAGG

Downstream 100 bases:

>100_bases
GCACGCCGGCGCTGTCCATCCGATTGGGGCCTGTCGCGTCGGGCCGCCATATTCAGGTGGCGGCATCAGCGCCGGGCTTG
CGCCACTTCACGACGCCGCG

Product: Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MRNNLPVTGVEFDYPETSMLVSATDLSSRIEYCNPAFVEVSGFSREELIGQPHNLIRHPSMPPQAFEDMWATIKAGRSWT
ALVKNRRKNGDHYWVRANVTPIMRRGKTVGYLSVRTKPRRDEIREAEALYARLNSGAHHGVRLRRGQVVRPGLLHVFDLW
RGAGLPAHIAAAGAAGMAAIASLLAVADRLSGSALLSLALAASAVGTGLPALLVARRAQQRIAELEQIGGRIAAGDLTVD
VPVAAGACTSGTLRALAQLRVSLVAIVSDVRMQIDQMKSVSQEVARGNIDLSRRTEVQAASLQETAASLEQLTATVKSNS
QAATQANTMVGGAQAATRGGCEAIQRTESTMRGISDSSDQIRAIVTTIDSIAFQTNILALNAAVEAARAGEAGKGFAVVA
SEVRNLAQRCATAAREIKGIADTNATAAIAACDSVSGTAGRMVEIESNMQQVFSIVQSIVTASVEQSQGIDSINNSVTQL
DSATQQNAALVEEGATTAGSLASQANVLDEAVRLFTLPD

Sequences:

>Translated_519_residues
MRNNLPVTGVEFDYPETSMLVSATDLSSRIEYCNPAFVEVSGFSREELIGQPHNLIRHPSMPPQAFEDMWATIKAGRSWT
ALVKNRRKNGDHYWVRANVTPIMRRGKTVGYLSVRTKPRRDEIREAEALYARLNSGAHHGVRLRRGQVVRPGLLHVFDLW
RGAGLPAHIAAAGAAGMAAIASLLAVADRLSGSALLSLALAASAVGTGLPALLVARRAQQRIAELEQIGGRIAAGDLTVD
VPVAAGACTSGTLRALAQLRVSLVAIVSDVRMQIDQMKSVSQEVARGNIDLSRRTEVQAASLQETAASLEQLTATVKSNS
QAATQANTMVGGAQAATRGGCEAIQRTESTMRGISDSSDQIRAIVTTIDSIAFQTNILALNAAVEAARAGEAGKGFAVVA
SEVRNLAQRCATAAREIKGIADTNATAAIAACDSVSGTAGRMVEIESNMQQVFSIVQSIVTASVEQSQGIDSINNSVTQL
DSATQQNAALVEEGATTAGSLASQANVLDEAVRLFTLPD
>Mature_519_residues
MRNNLPVTGVEFDYPETSMLVSATDLSSRIEYCNPAFVEVSGFSREELIGQPHNLIRHPSMPPQAFEDMWATIKAGRSWT
ALVKNRRKNGDHYWVRANVTPIMRRGKTVGYLSVRTKPRRDEIREAEALYARLNSGAHHGVRLRRGQVVRPGLLHVFDLW
RGAGLPAHIAAAGAAGMAAIASLLAVADRLSGSALLSLALAASAVGTGLPALLVARRAQQRIAELEQIGGRIAAGDLTVD
VPVAAGACTSGTLRALAQLRVSLVAIVSDVRMQIDQMKSVSQEVARGNIDLSRRTEVQAASLQETAASLEQLTATVKSNS
QAATQANTMVGGAQAATRGGCEAIQRTESTMRGISDSSDQIRAIVTTIDSIAFQTNILALNAAVEAARAGEAGKGFAVVA
SEVRNLAQRCATAAREIKGIADTNATAAIAACDSVSGTAGRMVEIESNMQQVFSIVQSIVTASVEQSQGIDSINNSVTQL
DSATQQNAALVEEGATTAGSLASQANVLDEAVRLFTLPD

Specific function: Signal transducer for aerotaxis. The aerotactic response is the accumulation of cells around air bubbles. The nature of the sensory stimulus detected by this protein is the proton motive force or cellular redox state. It uses a FAD prosthetic group as a r

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=510, Percent_Identity=39.4117647058824, Blast_Score=323, Evalue=2e-89,
Organism=Escherichia coli, GI1788194, Length=288, Percent_Identity=45.8333333333333, Blast_Score=208, Evalue=7e-55,
Organism=Escherichia coli, GI1787690, Length=289, Percent_Identity=47.0588235294118, Blast_Score=206, Evalue=3e-54,
Organism=Escherichia coli, GI2367378, Length=289, Percent_Identity=49.8269896193772, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=45.1178451178451, Blast_Score=194, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 54731; Mature: 54731

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNLPVTGVEFDYPETSMLVSATDLSSRIEYCNPAFVEVSGFSREELIGQPHNLIRHPS
CCCCCCCCCEECCCCCCHHEEEHHHHHHHHHCCCCCEEEECCCCHHHHCCCCHHHHCCCC
MPPQAFEDMWATIKAGRSWTALVKNRRKNGDHYWVRANVTPIMRRGKTVGYLSVRTKPRR
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCHHHHHCCCEEEEEEECCCCCH
DEIREAEALYARLNSGAHHGVRLRRGQVVRPGLLHVFDLWRGAGLPAHIAAAGAAGMAAI
HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHHHH
ASLLAVADRLSGSALLSLALAASAVGTGLPALLVARRAQQRIAELEQIGGRIAAGDLTVD
HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEE
VPVAAGACTSGTLRALAQLRVSLVAIVSDVRMQIDQMKSVSQEVARGNIDLSRRTEVQAA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SLQETAASLEQLTATVKSNSQAATQANTMVGGAQAATRGGCEAIQRTESTMRGISDSSDQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
IRAIVTTIDSIAFQTNILALNAAVEAARAGEAGKGFAVVASEVRNLAQRCATAAREIKGI
HHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ADTNATAAIAACDSVSGTAGRMVEIESNMQQVFSIVQSIVTASVEQSQGIDSINNSVTQL
CCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
DSATQQNAALVEEGATTAGSLASQANVLDEAVRLFTLPD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRNNLPVTGVEFDYPETSMLVSATDLSSRIEYCNPAFVEVSGFSREELIGQPHNLIRHPS
CCCCCCCCCEECCCCCCHHEEEHHHHHHHHHCCCCCEEEECCCCHHHHCCCCHHHHCCCC
MPPQAFEDMWATIKAGRSWTALVKNRRKNGDHYWVRANVTPIMRRGKTVGYLSVRTKPRR
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCHHHHHCCCEEEEEEECCCCCH
DEIREAEALYARLNSGAHHGVRLRRGQVVRPGLLHVFDLWRGAGLPAHIAAAGAAGMAAI
HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHCHHHHHHH
ASLLAVADRLSGSALLSLALAASAVGTGLPALLVARRAQQRIAELEQIGGRIAAGDLTVD
HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEE
VPVAAGACTSGTLRALAQLRVSLVAIVSDVRMQIDQMKSVSQEVARGNIDLSRRTEVQAA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SLQETAASLEQLTATVKSNSQAATQANTMVGGAQAATRGGCEAIQRTESTMRGISDSSDQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
IRAIVTTIDSIAFQTNILALNAAVEAARAGEAGKGFAVVASEVRNLAQRCATAAREIKGI
HHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ADTNATAAIAACDSVSGTAGRMVEIESNMQQVFSIVQSIVTASVEQSQGIDSINNSVTQL
CCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
DSATQQNAALVEEGATTAGSLASQANVLDEAVRLFTLPD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9190831; 9380671 [H]