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The map label for this gene is nudC [C]

Identifier: 229918399

GI number: 229918399

Start: 2651112

End: 2651885

Strand: Reverse

Name: nudC [C]

Synonym: EAT1b_2684

Alternate gene names: 229918399

Gene position: 2651885-2651112 (Counterclockwise)

Preceding gene: 229918400

Following gene: 229918372

Centisome position: 88.4

GC content: 52.45

Gene sequence:

>774_bases
ATGTTCCATCGCCGTAAAACGTACACGATTCGACCTGAACGCCTGCAAGAATTCACCGACTTTTTCCATACATACATTTA
CCCGATCCAGGCGTCGCATGGCGCCCGTCTCGTCGGACGCTGGGTGACCGAAGACAAGTCCGAGGTCATGGCACTATGGG
AATATCGGGACCGCGAACACTATGAACAAGTCGAACGGGATTATCGTGGCAGTACGTTGCGACGAGACGCTATGAAACAG
CGGGCTCGCCTCGGAAAAGAGCTGTATATCAAGTCAAGCGAAGAGTTCATGATGCCGACCGGTCACTATACGCCACCGCG
TGCGATTGTCTGTGTGACAGCGTATATCACGAATGAAGCGGGTGAGGTTCTCCTCGTCAAAAACATGCATCGGAACGACT
CGTTCGAGATGCCTGGCGGACAGGTGGAAGAACATGAGTCACTCGTTGACGCCATCCATCGTGAAGTGGACGAGGAAACG
GGCGTGAAAATCGAGGTGGAAGGCATCACGGGAATCTATCAAAACGTGTCCTCCCGCGTCCTCTGTGTCACGTTCCGCGC
AAAATATGTATCCGGTGACCTCAGACCGCAGGCTGGCGAGACACAGGAAGTTGGCTTCTATAAAGTCGACGCAAGTAACG
TCGGTGACTACATCAAACGGGAGCACTTCCAAATGCGCTTCCTCGATGCGATCGATCCCGTATACATGCCTTACGCCATT
TATAAAGTACGGCCATATGAACTGATTGAGCGCATTGAACGCCAATCCGTATGA

Upstream 100 bases:

>100_bases
TGTTGGAAAGGGAAACGCTCACATCTGTCGAATAAGAACCATGTAAGCGAATCGCGGTCACACATATAGGACACCGCACA
ACGAAAAAGGAGGAATCATC

Downstream 100 bases:

>100_bases
CGCAAAAAGGGATGATCCGCCATGTGCGAATCATCCCTTTTGTTTATGCTTCTTGCATGTCTTCTTGCTGAGATTGTCCA
GTCTCCACTAACAGTTTCCG

Product: NUDIX hydrolase

Products: AMP; NMNH. [C]

Alternate protein names: ORF154 [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MFHRRKTYTIRPERLQEFTDFFHTYIYPIQASHGARLVGRWVTEDKSEVMALWEYRDREHYEQVERDYRGSTLRRDAMKQ
RARLGKELYIKSSEEFMMPTGHYTPPRAIVCVTAYITNEAGEVLLVKNMHRNDSFEMPGGQVEEHESLVDAIHREVDEET
GVKIEVEGITGIYQNVSSRVLCVTFRAKYVSGDLRPQAGETQEVGFYKVDASNVGDYIKREHFQMRFLDAIDPVYMPYAI
YKVRPYELIERIERQSV

Sequences:

>Translated_257_residues
MFHRRKTYTIRPERLQEFTDFFHTYIYPIQASHGARLVGRWVTEDKSEVMALWEYRDREHYEQVERDYRGSTLRRDAMKQ
RARLGKELYIKSSEEFMMPTGHYTPPRAIVCVTAYITNEAGEVLLVKNMHRNDSFEMPGGQVEEHESLVDAIHREVDEET
GVKIEVEGITGIYQNVSSRVLCVTFRAKYVSGDLRPQAGETQEVGFYKVDASNVGDYIKREHFQMRFLDAIDPVYMPYAI
YKVRPYELIERIERQSV
>Mature_257_residues
MFHRRKTYTIRPERLQEFTDFFHTYIYPIQASHGARLVGRWVTEDKSEVMALWEYRDREHYEQVERDYRGSTLRRDAMKQ
RARLGKELYIKSSEEFMMPTGHYTPPRAIVCVTAYITNEAGEVLLVKNMHRNDSFEMPGGQVEEHESLVDAIHREVDEET
GVKIEVEGITGIYQNVSSRVLCVTFRAKYVSGDLRPQAGETQEVGFYKVDASNVGDYIKREHFQMRFLDAIDPVYMPYAI
YKVRPYELIERIERQSV

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 30267; Mature: 30267

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHRRKTYTIRPERLQEFTDFFHTYIYPIQASHGARLVGRWVTEDKSEVMALWEYRDREH
CCCCCCEEEECHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHH
YEQVERDYRGSTLRRDAMKQRARLGKELYIKSSEEFMMPTGHYTPPRAIVCVTAYITNEA
HHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCCEEEEEEEEEECCC
GEVLLVKNMHRNDSFEMPGGQVEEHESLVDAIHREVDEETGVKIEVEGITGIYQNVSSRV
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCE
LCVTFRAKYVSGDLRPQAGETQEVGFYKVDASNVGDYIKREHFQMRFLDAIDPVYMPYAI
EEEEEEHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHCCEEE
YKVRPYELIERIERQSV
EEECHHHHHHHHHHCCC
>Mature Secondary Structure
MFHRRKTYTIRPERLQEFTDFFHTYIYPIQASHGARLVGRWVTEDKSEVMALWEYRDREH
CCCCCCEEEECHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHH
YEQVERDYRGSTLRRDAMKQRARLGKELYIKSSEEFMMPTGHYTPPRAIVCVTAYITNEA
HHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCCEEEEEEEEEECCC
GEVLLVKNMHRNDSFEMPGGQVEEHESLVDAIHREVDEETGVKIEVEGITGIYQNVSSRV
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCE
LCVTFRAKYVSGDLRPQAGETQEVGFYKVDASNVGDYIKREHFQMRFLDAIDPVYMPYAI
EEEEEEHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHCCEEE
YKVRPYELIERIERQSV
EEECHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H2O [C]

Specific reaction: NADH + H2O = AMP + NMNH. [C]

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934842 [H]