Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918372
Identifier: 229918372
GI number: 229918372
Start: 2628385
End: 2628840
Strand: Reverse
Name: 229918372
Synonym: EAT1b_2657
Alternate gene names: NA
Gene position: 2628840-2628385 (Counterclockwise)
Preceding gene: 229918399
Following gene: 229918371
Centisome position: 87.63
GC content: 47.37
Gene sequence:
>456_bases TTGTCGCATTCCGAAAAAGGTTTTACGCTCGTCGAAGTGCTCGTCTCCATCGTTGTTCTTTCCATTGTCTCATTTTCTTT ACTTTCGATTTTCAGCCAAAGTTTGAAGACGACACACGACAGTCTCAATCAAACGATTGCGAACCAAGTGGCGCAAAATA CGCTACATACTTTAAATCGACGGGCCGCATCCGTTGATGAACCGCTCGAACTGCGTCAATTGTTGAATAGGGACGGGATC AGCCCGACGTGCGATTTTTGTAGAGACACACGAATCCATGGGGAAACGTATGTCTCAACCATTCAATCGCTGTCCACTTC ACCCGGACATACCATTGAAGTTGAAATTTCGGTGACGACCGACCGTTTGCAAAACCCCGTCACTTTGAAAGGAGTCATTT CGAATGCGACATTACGCGAACCGTTCCCTGAAACGGCTGTCCCGACAACTGACTGA
Upstream 100 bases:
>100_bases CTTTAGTATAATATGTATTGTACAAAAAATAACATTTAATTCAGTATTGCATACGTTATTTTCCGATTGTTTTACTTTTT TTGAATAGGAGGTCAATGTC
Downstream 100 bases:
>100_bases GATGAAGAAACGTGAAGACGGCTTCACGCTCGTCGAGTTGCTCGTCACGGTCGTTGTCGCTTCGATTTTGAGCGGCGTCA TCATCACGGCCTTTATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSHSEKGFTLVEVLVSIVVLSIVSFSLLSIFSQSLKTTHDSLNQTIANQVAQNTLHTLNRRAASVDEPLELRQLLNRDGI SPTCDFCRDTRIHGETYVSTIQSLSTSPGHTIEVEISVTTDRLQNPVTLKGVISNATLREPFPETAVPTTD
Sequences:
>Translated_151_residues MSHSEKGFTLVEVLVSIVVLSIVSFSLLSIFSQSLKTTHDSLNQTIANQVAQNTLHTLNRRAASVDEPLELRQLLNRDGI SPTCDFCRDTRIHGETYVSTIQSLSTSPGHTIEVEISVTTDRLQNPVTLKGVISNATLREPFPETAVPTTD >Mature_150_residues SHSEKGFTLVEVLVSIVVLSIVSFSLLSIFSQSLKTTHDSLNQTIANQVAQNTLHTLNRRAASVDEPLELRQLLNRDGIS PTCDFCRDTRIHGETYVSTIQSLSTSPGHTIEVEISVTTDRLQNPVTLKGVISNATLREPFPETAVPTTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16561; Mature: 16430
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSEKGFTLVEVLVSIVVLSIVSFSLLSIFSQSLKTTHDSLNQTIANQVAQNTLHTLNR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAASVDEPLELRQLLNRDGISPTCDFCRDTRIHGETYVSTIQSLSTSPGHTIEVEISVTT HHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEH DRLQNPVTLKGVISNATLREPFPETAVPTTD HHHCCCCEEHHHHCCCHHCCCCCCCCCCCCC >Mature Secondary Structure SHSEKGFTLVEVLVSIVVLSIVSFSLLSIFSQSLKTTHDSLNQTIANQVAQNTLHTLNR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAASVDEPLELRQLLNRDGISPTCDFCRDTRIHGETYVSTIQSLSTSPGHTIEVEISVTT HHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEH DRLQNPVTLKGVISNATLREPFPETAVPTTD HHHCCCCEEHHHHCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA