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The map label for this gene is yngC [H]

Identifier: 229918400

GI number: 229918400

Start: 2652005

End: 2652583

Strand: Reverse

Name: yngC [H]

Synonym: EAT1b_2685

Alternate gene names: 229918400

Gene position: 2652583-2652005 (Counterclockwise)

Preceding gene: 229918401

Following gene: 229918399

Centisome position: 88.42

GC content: 53.71

Gene sequence:

>579_bases
TTGAACGTCCTCGAGCATCTACTCGCTGTCTGTGGGGTCTTCAGCATTCCCATCGGTATCTTGGTCCAATTCATCCCGAA
CGAACTCGTTCTCGCATACGGCGGCTTCCTCGTCGACTCGCATGACGCGCCCTTCTTCCTGACGTTCCTGCTGGCGTGGG
TCTCCTTCACGCTCAGCCAAATCGGTCTATACTGGATCGGTCGATATGGTGGGCGTCCCGTCGCGCTCAAACTGTATCGT
TATTTTCGAATTCGGCAAGACAAGCAACTCCGTGCCGAGCGCTGGTTTGAGAAATACGGGGCATGGATCGTCTGCCTCAG
TCTCTTTTGGCGGCAACTGTTCGCCGTGAGCGCCGGCGTGATGCGTCTATCGTTCCGTAAGTTTTTGTCGGTGACGACCT
TGATTTTCGCCGTCTGGTCATTCCTTTTCATCCATGTCGGGATGATGCTTGGTAGCAATTGGCGCATGATCGGTCACTTC
ATGGACGATGTCATCCCCTTCTTGGCTCTTGCTGTCGGAATCGTCCTCATCGTTCGACATGTTCGTCAGCAACCAAAACG
TGTGAAAGAATCAGCGTGA

Upstream 100 bases:

>100_bases
TCACGAATATGTGACATCTCTTCTTTTTCTTTTCAGTCATGTCCGTTATACTGATGGATGGAACATCTTTCCTGAAATCA
ATTGAAAGGAGGGCTACGTC

Downstream 100 bases:

>100_bases
CTTGCGCTGATTCTTTTTTTGTTGGAAAGGGAAACGCTCACATCTGTCGAATAAGAACCATGTAAGCGAATCGCGGTCAC
ACATATAGGACACCGCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNVLEHLLAVCGVFSIPIGILVQFIPNELVLAYGGFLVDSHDAPFFLTFLLAWVSFTLSQIGLYWIGRYGGRPVALKLYR
YFRIRQDKQLRAERWFEKYGAWIVCLSLFWRQLFAVSAGVMRLSFRKFLSVTTLIFAVWSFLFIHVGMMLGSNWRMIGHF
MDDVIPFLALAVGIVLIVRHVRQQPKRVKESA

Sequences:

>Translated_192_residues
MNVLEHLLAVCGVFSIPIGILVQFIPNELVLAYGGFLVDSHDAPFFLTFLLAWVSFTLSQIGLYWIGRYGGRPVALKLYR
YFRIRQDKQLRAERWFEKYGAWIVCLSLFWRQLFAVSAGVMRLSFRKFLSVTTLIFAVWSFLFIHVGMMLGSNWRMIGHF
MDDVIPFLALAVGIVLIVRHVRQQPKRVKESA
>Mature_192_residues
MNVLEHLLAVCGVFSIPIGILVQFIPNELVLAYGGFLVDSHDAPFFLTFLLAWVSFTLSQIGLYWIGRYGGRPVALKLYR
YFRIRQDKQLRAERWFEKYGAWIVCLSLFWRQLFAVSAGVMRLSFRKFLSVTTLIFAVWSFLFIHVGMMLGSNWRMIGHF
MDDVIPFLALAVGIVLIVRHVRQQPKRVKESA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22222; Mature: 22222

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLEHLLAVCGVFSIPIGILVQFIPNELVLAYGGFLVDSHDAPFFLTFLLAWVSFTLSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHH
IGLYWIGRYGGRPVALKLYRYFRIRQDKQLRAERWFEKYGAWIVCLSLFWRQLFAVSAGV
HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRLSFRKFLSVTTLIFAVWSFLFIHVGMMLGSNWRMIGHFMDDVIPFLALAVGIVLIVRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQQPKRVKESA
HHHHHHHHHCCC
>Mature Secondary Structure
MNVLEHLLAVCGVFSIPIGILVQFIPNELVLAYGGFLVDSHDAPFFLTFLLAWVSFTLSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHH
IGLYWIGRYGGRPVALKLYRYFRIRQDKQLRAERWFEKYGAWIVCLSLFWRQLFAVSAGV
HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRLSFRKFLSVTTLIFAVWSFLFIHVGMMLGSNWRMIGHFMDDVIPFLALAVGIVLIVRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQQPKRVKESA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]