Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is murI [H]
Identifier: 229918347
GI number: 229918347
Start: 2597336
End: 2598154
Strand: Direct
Name: murI [H]
Synonym: EAT1b_2632
Alternate gene names: 229918347
Gene position: 2597336-2598154 (Clockwise)
Preceding gene: 229918346
Following gene: 229918348
Centisome position: 86.58
GC content: 53.48
Gene sequence:
>819_bases ATGGAAGTGATGCAAATGAAACGAGCGATTGGAGTCCTCGATTCAGGAGTCGGCGGATTGACGGTAGTCAAAGAATTGAT GCGCCAACTCCCTAAAGAAGAAATCGTCTATATCGGAGATACTGAACGCTGTCCATACGGGCCGCGTCCGCACGATGAGA TTGAAGCATATACATGGGAATTGATTGAATTTTTATTGAAGAAAGACGTCAAGATGATTGTCATCGCCTGTAATACGGCG ACCGCGGTCGTATTGAAAGAGGCGCGTAAACGTCTCGACATCCCGGTCATCGGTGTCATCGACCCGGGTGCCCGCGCGGC TGTCAAAGGGACGCGCAACAAGCACATCGGTGTCATCGGTACGAAGATGACGATTGAGAGCGGTTCATATGAGAAGGCGT TACGTCACGTGGCAGGTGAGGTCGATGTGTATTCACTCGCGTGCCCGCCGTTCGTCCCGCTCGTAGAGGCTGGAGAAGTG TCTGGAGAGCGCGTGCGTCAAGTGGTGGAGGAAACACTTCGTCCACTTCAGCCATCCGAGATGGATACGTTGATTCTCGG TTGTACGCATTACCCACTCCTTGCCCCAGTCATTCAAGATGTGGTCGGACCGGACGTCCACCTCATCTCATCAGGTGACG AGACGGCGCTTGAAGTGGCTGCGATGCTCGATTATCAGGAACTTGAGAATGGATTGGATGCAGTCCCGGAACATGCCTTC TATGCGACGGGTGATATCGAACTATTTGACCGACTCGCGAGCGAATGGCTCGGGCGTCCGGTTCATGCGGAGAAAGTCGA GGTGACCGGCATTGCGTGA
Upstream 100 bases:
>100_bases TAATTCGGGTAAGGGACGAGGCGCCACTGGCGACCTCGTCTTTTTTTGTCATGGGAACGTTTCTTTTTCCGTCCGAGGTT TTTTGGTAAGATAGGTGAGA
Downstream 100 bases:
>100_bases TGCGAGACGATTTGATGAACTGCGCCCAGTCGAGATTGTGCCGCACGTGAACAAGCATGCGGAAGGGTCCGTATTGATTT CAATCGGCGATACGAAAGTC
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MEVMQMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWELIEFLLKKDVKMIVIACNTA TAVVLKEARKRLDIPVIGVIDPGARAAVKGTRNKHIGVIGTKMTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAGEV SGERVRQVVEETLRPLQPSEMDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAMLDYQELENGLDAVPEHAF YATGDIELFDRLASEWLGRPVHAEKVEVTGIA
Sequences:
>Translated_272_residues MEVMQMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWELIEFLLKKDVKMIVIACNTA TAVVLKEARKRLDIPVIGVIDPGARAAVKGTRNKHIGVIGTKMTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAGEV SGERVRQVVEETLRPLQPSEMDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAMLDYQELENGLDAVPEHAF YATGDIELFDRLASEWLGRPVHAEKVEVTGIA >Mature_272_residues MEVMQMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWELIEFLLKKDVKMIVIACNTA TAVVLKEARKRLDIPVIGVIDPGARAAVKGTRNKHIGVIGTKMTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAGEV SGERVRQVVEETLRPLQPSEMDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAMLDYQELENGLDAVPEHAF YATGDIELFDRLASEWLGRPVHAEKVEVTGIA
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=224, Percent_Identity=31.25, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29807; Mature: 29807
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVMQMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWE CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCHHHHHHHHH LIEFLLKKDVKMIVIACNTATAVVLKEARKRLDIPVIGVIDPGARAAVKGTRNKHIGVIG HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCEEEEEE TKMTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAGEVSGERVRQVVEETLRPLQPSE EEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCC MDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAMLDYQELENGLDAVPEHAF CCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCE YATGDIELFDRLASEWLGRPVHAEKVEVTGIA EECCCHHHHHHHHHHHCCCCCCCCEEEEECCC >Mature Secondary Structure MEVMQMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWE CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCHHHHHHHHH LIEFLLKKDVKMIVIACNTATAVVLKEARKRLDIPVIGVIDPGARAAVKGTRNKHIGVIG HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCEEEEEE TKMTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAGEVSGERVRQVVEETLRPLQPSE EEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCC MDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAMLDYQELENGLDAVPEHAF CCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCE YATGDIELFDRLASEWLGRPVHAEKVEVTGIA EECCCHHHHHHHHHHHCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA