Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is yvbH [H]
Identifier: 229918270
GI number: 229918270
Start: 2514130
End: 2514744
Strand: Reverse
Name: yvbH [H]
Synonym: EAT1b_2553
Alternate gene names: 229918270
Gene position: 2514744-2514130 (Counterclockwise)
Preceding gene: 229918271
Following gene: 229918268
Centisome position: 83.83
GC content: 46.02
Gene sequence:
>615_bases ATGTTCAAAAAACTGGCTTCTGATTTGACTGGCTTCAGCGACATCGGTGAGGTGATCGACCCGTCCGATTTCGATAAGGC GGACTCGGATGATTATGTCCTCCATGAGGATAACGAAAAGATCTACTTCTTGATCAAATCAAAATCGGATGAATACTGCT TTACAAACTTAGGTATGATTCACCTTGATGGAACGAGCGCGATGAGTTCGAAACGAGTTCTGTATCGTTACCCTTACGCA CACTATCCGATTAAGCACGTCATGTTCGAGACGGCCGGCACCGTCGACCTCGATGTCGAAGTCAAATTCACAATCGGCGA CAAGCCATACTCAATCGATATCAACAAGAAACAAATCGAGCACGTGAAAGATTTGTACAAGGCACTCCTCGCGATTGAAG AGATTCAGCGGGAAGGCCGTCGCATGATGGAGTATGCAAACACATCATTGACTCACTCCGTCTCGATCTTGAGCGGACTC CGTGAAGGTGACATGAACGTGCCGAACACGTTCAAGGAATTGAACGAGCAATCGTTCGATTGGCTACAACGTCACTATCA TGAATGGAACCGTAAAGACTTCGGTACGGTTTACGAGAAGTACATCAATAACTAA
Upstream 100 bases:
>100_bases GAAAGAAGAGATGGCGGCCATCGATGCGCTCAATCGTGATGAGCGGACCGGCTCCGACCCGAAAGAGATGCATAAAATCC ATTACTGAGGAGTGAATGAC
Downstream 100 bases:
>100_bases AAAAACAACTCCTCCACAGACGATTCGTCCTCGGAGGAGTTGTTTTAGTTCTCATCAATCAATTGCTCGGCCAATCGCTG ATACAAGTGGCTCATATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MFKKLASDLTGFSDIGEVIDPSDFDKADSDDYVLHEDNEKIYFLIKSKSDEYCFTNLGMIHLDGTSAMSSKRVLYRYPYA HYPIKHVMFETAGTVDLDVEVKFTIGDKPYSIDINKKQIEHVKDLYKALLAIEEIQREGRRMMEYANTSLTHSVSILSGL REGDMNVPNTFKELNEQSFDWLQRHYHEWNRKDFGTVYEKYINN
Sequences:
>Translated_204_residues MFKKLASDLTGFSDIGEVIDPSDFDKADSDDYVLHEDNEKIYFLIKSKSDEYCFTNLGMIHLDGTSAMSSKRVLYRYPYA HYPIKHVMFETAGTVDLDVEVKFTIGDKPYSIDINKKQIEHVKDLYKALLAIEEIQREGRRMMEYANTSLTHSVSILSGL REGDMNVPNTFKELNEQSFDWLQRHYHEWNRKDFGTVYEKYINN >Mature_204_residues MFKKLASDLTGFSDIGEVIDPSDFDKADSDDYVLHEDNEKIYFLIKSKSDEYCFTNLGMIHLDGTSAMSSKRVLYRYPYA HYPIKHVMFETAGTVDLDVEVKFTIGDKPYSIDINKKQIEHVKDLYKALLAIEEIQREGRRMMEYANTSLTHSVSILSGL REGDMNVPNTFKELNEQSFDWLQRHYHEWNRKDFGTVYEKYINN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012544 - InterPro: IPR021722 [H]
Pfam domain/function: PF08000 DUF1696; PF11724 YvbH_ext [H]
EC number: NA
Molecular weight: Translated: 23864; Mature: 23864
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKLASDLTGFSDIGEVIDPSDFDKADSDDYVLHEDNEKIYFLIKSKSDEYCFTNLGMI CHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCEEEECCCEE HLDGTSAMSSKRVLYRYPYAHYPIKHVMFETAGTVDLDVEVKFTIGDKPYSIDINKKQIE EECCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCEEECCCHHHHH HVKDLYKALLAIEEIQREGRRMMEYANTSLTHSVSILSGLREGDMNVPNTFKELNEQSFD HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHH WLQRHYHEWNRKDFGTVYEKYINN HHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MFKKLASDLTGFSDIGEVIDPSDFDKADSDDYVLHEDNEKIYFLIKSKSDEYCFTNLGMI CHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCEEEECCCEE HLDGTSAMSSKRVLYRYPYAHYPIKHVMFETAGTVDLDVEVKFTIGDKPYSIDINKKQIE EECCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCEEECCCHHHHH HVKDLYKALLAIEEIQREGRRMMEYANTSLTHSVSILSGLREGDMNVPNTFKELNEQSFD HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHH WLQRHYHEWNRKDFGTVYEKYINN HHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]