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The map label for this gene is yqfA [C]

Identifier: 229918268

GI number: 229918268

Start: 2512795

End: 2513439

Strand: Reverse

Name: yqfA [C]

Synonym: EAT1b_2551

Alternate gene names: 229918268

Gene position: 2513439-2512795 (Counterclockwise)

Preceding gene: 229918270

Following gene: 229918267

Centisome position: 83.78

GC content: 51.94

Gene sequence:

>645_bases
ATGCATTCGATTTTCCGTGAACCCATCAACGCACTGACGCATCTTGCCGGTGCGGTACTCGCTTTCATCGCGCTCATCGC
GATGGTCGTCAAAGCCTCGTTACTCGGCTCGCCACTTGCCATTATGGCCGCGATTCTTTTCGGGATCAGCCTCGTCTTTC
TTTACTTATCGTCAGGTCTTTACCATAGCATCATCGCCTCACCGAACGTCATCGCTTTCTTCCGGAGAATCGACCATGCG
ATGATTTACGCGTTGATTGCGGGTACATACGCACCGCTCACGTTACTCGCGCTCGAAGGACCGACGCGGTGGGTCCTCTT
CGGTACCGTACACGCACTCGCCTTGTTCGGCATTATTTTTAAACTCGTCTGGTTCCATGCCCCTCGTTTCTTGTCGACCG
CGCTCTATATCGGGATGGGATGGTTGTCAGTTTTCTTTATCGGACCACTCCATAACGTGATCGGCAACGCCGGTATCTTC
TGGCTCGTCCTCGGGGGCGTCATGTATACGATTGGCGGACTCATTTATGGGTTCAAACCAAAATTCGTCAACTGGCGAGG
ATGGGGGTTCCATGAAGTGTTCCATCTGTTCATCTTGTTCGGAAGCTTCGCTCACTTCGTCTGTGTATTCTGGTACGTCT
TTTAA

Upstream 100 bases:

>100_bases
AGAAAACTTTCATTTGTCGAAAGGTACACCTTGCTGTTTGTTCCTCTTCAGTATATCATGTAGTTATCGATACTACATGA
TGTGATAAGGAGTGTTTTAC

Downstream 100 bases:

>100_bases
GTCCTCCTCGTGGAGGGCTTATTTTCATGAGCCGTTTCCTGTACTTTGAATTCAAGATTTCCTACACTAAGGACAGGAGG
GATTCATCATGAAAATTGAA

Product: channel protein, hemolysin III family

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MHSIFREPINALTHLAGAVLAFIALIAMVVKASLLGSPLAIMAAILFGISLVFLYLSSGLYHSIIASPNVIAFFRRIDHA
MIYALIAGTYAPLTLLALEGPTRWVLFGTVHALALFGIIFKLVWFHAPRFLSTALYIGMGWLSVFFIGPLHNVIGNAGIF
WLVLGGVMYTIGGLIYGFKPKFVNWRGWGFHEVFHLFILFGSFAHFVCVFWYVF

Sequences:

>Translated_214_residues
MHSIFREPINALTHLAGAVLAFIALIAMVVKASLLGSPLAIMAAILFGISLVFLYLSSGLYHSIIASPNVIAFFRRIDHA
MIYALIAGTYAPLTLLALEGPTRWVLFGTVHALALFGIIFKLVWFHAPRFLSTALYIGMGWLSVFFIGPLHNVIGNAGIF
WLVLGGVMYTIGGLIYGFKPKFVNWRGWGFHEVFHLFILFGSFAHFVCVFWYVF
>Mature_214_residues
MHSIFREPINALTHLAGAVLAFIALIAMVVKASLLGSPLAIMAAILFGISLVFLYLSSGLYHSIIASPNVIAFFRRIDHA
MIYALIAGTYAPLTLLALEGPTRWVLFGTVHALALFGIIFKLVWFHAPRFLSTALYIGMGWLSVFFIGPLHNVIGNAGIF
WLVLGGVMYTIGGLIYGFKPKFVNWRGWGFHEVFHLFILFGSFAHFVCVFWYVF

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=213, Percent_Identity=34.7417840375587, Blast_Score=110, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23789; Mature: 23789

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSIFREPINALTHLAGAVLAFIALIAMVVKASLLGSPLAIMAAILFGISLVFLYLSSGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
YHSIIASPNVIAFFRRIDHAMIYALIAGTYAPLTLLALEGPTRWVLFGTVHALALFGIIF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHH
KLVWFHAPRFLSTALYIGMGWLSVFFIGPLHNVIGNAGIFWLVLGGVMYTIGGLIYGFKP
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
KFVNWRGWGFHEVFHLFILFGSFAHFVCVFWYVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MHSIFREPINALTHLAGAVLAFIALIAMVVKASLLGSPLAIMAAILFGISLVFLYLSSGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
YHSIIASPNVIAFFRRIDHAMIYALIAGTYAPLTLLALEGPTRWVLFGTVHALALFGIIF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHH
KLVWFHAPRFLSTALYIGMGWLSVFFIGPLHNVIGNAGIFWLVLGGVMYTIGGLIYGFKP
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
KFVNWRGWGFHEVFHLFILFGSFAHFVCVFWYVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]