Click here to switch to the map view.

The map label for this gene is ytxM [H]

Identifier: 229918093

GI number: 229918093

Start: 2325347

End: 2326126

Strand: Reverse

Name: ytxM [H]

Synonym: EAT1b_2373

Alternate gene names: 229918093

Gene position: 2326126-2325347 (Counterclockwise)

Preceding gene: 229918094

Following gene: 229918092

Centisome position: 77.54

GC content: 50.0

Gene sequence:

>780_bases
ATGAACATCGATTTACGTGGCGTACGTTATGAAGTGATTCATCGCGGTGAGGGAAAACCGGTGTTATGTTTACACGGATT
CACCGGAAACGCCCATTGGGTCGATTCGCTTCCTGCATTACCGATTCGTCTTGTGTCACCGTCACTCCTCCAACATGGCG
CAACGGAGCACCCTTCAGTCAATCGTTCGACAATGAGTCAACAAGTTAAAGATTTGTCCCGCTTACTGGATACGGACGAC
CGACCTTGGACAGTCGTCGGTTATTCACTCGGTGGGAGAATCGCATTGACACTCGCCGCATGCGACGAGCGCGTCGAACA
TGTCATCGGGATCAGCACGACCCCAGGTCTGCTCACTTCTAAAGAAAGAGCCGCACGCCGGCGCCAAGATGCAGAATTGG
CTCAATTGATTGAAACCGAGGGCATCGCTGCATTCGTCAATCGTTGGGAGAACCTTCCCCTTTGGCGACAGACGGAAGAC
ATGAAACGTTCACTCCGAAAAGATCGGCTTGCCCAACACCCAAATGCCCTCGCAAACAGTTTGCGGTCAATCGGTACGGG
ACATATGCCGTCGTTATGGGGCACATTGCAGCGTCTCCCCCGCACCGATTTGATTGTCGGGACAGACGATCTCAAGTTCA
AAGCCATCGCAAAACACATGCAGGAAGAGCGTCCAGATATTAAAATCTATGAAATTTCAAACGCAGGGCATGCTCCTCAT
ATCGAGAATGCATCAGAGTTTGGTACAATAATAAAGAAATTGATTTTAGGGGGTATTTAA

Upstream 100 bases:

>100_bases
TTCATTTAATCGAATTCCCATCGAATCGTGAGGAGAATGTGATGATCCATCGGGGGTGGACTCAATCGGTCTGCAGTCGT
CTCATTACGGAGAACGAATC

Downstream 100 bases:

>100_bases
AATGGAATCAGTAGCGAACTGGACATCGGTCCGGACGTATGAAGACATTAAATATGAAACGTGGAACGGGATTGCCAAAA
TCACCATCAACCGTCCCGAA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNIDLRGVRYEVIHRGEGKPVLCLHGFTGNAHWVDSLPALPIRLVSPSLLQHGATEHPSVNRSTMSQQVKDLSRLLDTDD
RPWTVVGYSLGGRIALTLAACDERVEHVIGISTTPGLLTSKERAARRRQDAELAQLIETEGIAAFVNRWENLPLWRQTED
MKRSLRKDRLAQHPNALANSLRSIGTGHMPSLWGTLQRLPRTDLIVGTDDLKFKAIAKHMQEERPDIKIYEISNAGHAPH
IENASEFGTIIKKLILGGI

Sequences:

>Translated_259_residues
MNIDLRGVRYEVIHRGEGKPVLCLHGFTGNAHWVDSLPALPIRLVSPSLLQHGATEHPSVNRSTMSQQVKDLSRLLDTDD
RPWTVVGYSLGGRIALTLAACDERVEHVIGISTTPGLLTSKERAARRRQDAELAQLIETEGIAAFVNRWENLPLWRQTED
MKRSLRKDRLAQHPNALANSLRSIGTGHMPSLWGTLQRLPRTDLIVGTDDLKFKAIAKHMQEERPDIKIYEISNAGHAPH
IENASEFGTIIKKLILGGI
>Mature_259_residues
MNIDLRGVRYEVIHRGEGKPVLCLHGFTGNAHWVDSLPALPIRLVSPSLLQHGATEHPSVNRSTMSQQVKDLSRLLDTDD
RPWTVVGYSLGGRIALTLAACDERVEHVIGISTTPGLLTSKERAARRRQDAELAQLIETEGIAAFVNRWENLPLWRQTED
MKRSLRKDRLAQHPNALANSLRSIGTGHMPSLWGTLQRLPRTDLIVGTDDLKFKAIAKHMQEERPDIKIYEISNAGHAPH
IENASEFGTIIKKLILGGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]

Homologues:

Organism=Escherichia coli, GI1788598, Length=239, Percent_Identity=30.1255230125523, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639
- InterPro:   IPR022485 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 28885; Mature: 28885

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDLRGVRYEVIHRGEGKPVLCLHGFTGNAHWVDSLPALPIRLVSPSLLQHGATEHPSV
CCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCC
NRSTMSQQVKDLSRLLDTDDRPWTVVGYSLGGRIALTLAACDERVEHVIGISTTPGLLTS
CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCC
KERAARRRQDAELAQLIETEGIAAFVNRWENLPLWRQTEDMKRSLRKDRLAQHPNALANS
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
LRSIGTGHMPSLWGTLQRLPRTDLIVGTDDLKFKAIAKHMQEERPDIKIYEISNAGHAPH
HHHHCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCC
IENASEFGTIIKKLILGGI
CCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIDLRGVRYEVIHRGEGKPVLCLHGFTGNAHWVDSLPALPIRLVSPSLLQHGATEHPSV
CCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCC
NRSTMSQQVKDLSRLLDTDDRPWTVVGYSLGGRIALTLAACDERVEHVIGISTTPGLLTS
CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCC
KERAARRRQDAELAQLIETEGIAAFVNRWENLPLWRQTEDMKRSLRKDRLAQHPNALANS
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
LRSIGTGHMPSLWGTLQRLPRTDLIVGTDDLKFKAIAKHMQEERPDIKIYEISNAGHAPH
HHHHCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCC
IENASEFGTIIKKLILGGI
CCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8566759; 9387221; 9384377 [H]