Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918028
Identifier: 229918028
GI number: 229918028
Start: 2260323
End: 2261195
Strand: Reverse
Name: 229918028
Synonym: EAT1b_2307
Alternate gene names: NA
Gene position: 2261195-2260323 (Counterclockwise)
Preceding gene: 229918030
Following gene: 229918026
Centisome position: 75.38
GC content: 43.3
Gene sequence:
>873_bases GTGAAACGAGCGCTACGTTTTGTAGAATGCAGGCAATTACCGTTACATGAGCGTATTTCCATTCAGTCGCTATATCCTTT AAGCAAGGCTCCTTTGCTTCTCTCCCTCCCATCACATCATCACGTCTATGTTGCACTCAATCGCGATGCCCCACTCGCTT CGATCGTCGCAAACGACGAACAGTTTGAGACGGAACATGCTATTCGCCTCTCTCAAGCCACGTATTGTGATCGTCACGTC TTTCGCGGACTACTTCACCGTTTGATCTATGAGCGAAGTCGAGAAACGACGTACCCGATCACGTACTATCTTCAGGAGGA AGACTATCAAAATCAAGATAAGCTTCGAATATATGAAGCAGCAGGATTTCAAGTATTCCATCAAACGAAAACGTATCATC TACCGTTCATCCCGTGTGAGAAAGCAACTCATAGCGATTGGACACTCGAATTAGTGGACTATTCAAGAAGAGCCGATTGG CTCACATTTCGAAATGAGCATTGTCATCTCCTTCCGAGTGCCATGTCAATGACAGATGAACAATTCGCACGAGAAGTTCG CCAGCAAACATTGTTCTATTCCGTGAAGTGGAATCGACAAGTGATTGGAATCATGAAAGTTCGCTTACATATGTACCATA TTTCAATACAGGAGATGCATGTTGATTGTGATGAGCCTTTATTGAGGGACGCCATTTCATTCCTTCAACAAAAATTTTTC TACATGTTCCGATACATTGAAGAGGCACATATTTCAGCAACAAATCTGCAACCTGATTTGACATATATACTTCGACGCCA CGGTACCCAAATCTCAAATATTTGTCGTTATACGTACACGCTACAGGCACCACCGACCCCGATTTATTTATAA
Upstream 100 bases:
>100_bases TTCTCGAGTCAGGTTTCATTATACTGCCACACCCCTCGATGCAAGATAGCGCTTACAATTTATTTGTACTTATCATTTGA TAAAGAAAGAAGGATTCTTC
Downstream 100 bases:
>100_bases CAATCAAAAGACGTCGAGCAAACCAACTCTTTCTCAAAGGAAAAAGTTGTTCATTCGACGTCTTTTATTCTGCAGCAGTA GTCGACTCCATCGCTAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKRALRFVECRQLPLHERISIQSLYPLSKAPLLLSLPSHHHVYVALNRDAPLASIVANDEQFETEHAIRLSQATYCDRHV FRGLLHRLIYERSRETTYPITYYLQEEDYQNQDKLRIYEAAGFQVFHQTKTYHLPFIPCEKATHSDWTLELVDYSRRADW LTFRNEHCHLLPSAMSMTDEQFAREVRQQTLFYSVKWNRQVIGIMKVRLHMYHISIQEMHVDCDEPLLRDAISFLQQKFF YMFRYIEEAHISATNLQPDLTYILRRHGTQISNICRYTYTLQAPPTPIYL
Sequences:
>Translated_290_residues MKRALRFVECRQLPLHERISIQSLYPLSKAPLLLSLPSHHHVYVALNRDAPLASIVANDEQFETEHAIRLSQATYCDRHV FRGLLHRLIYERSRETTYPITYYLQEEDYQNQDKLRIYEAAGFQVFHQTKTYHLPFIPCEKATHSDWTLELVDYSRRADW LTFRNEHCHLLPSAMSMTDEQFAREVRQQTLFYSVKWNRQVIGIMKVRLHMYHISIQEMHVDCDEPLLRDAISFLQQKFF YMFRYIEEAHISATNLQPDLTYILRRHGTQISNICRYTYTLQAPPTPIYL >Mature_290_residues MKRALRFVECRQLPLHERISIQSLYPLSKAPLLLSLPSHHHVYVALNRDAPLASIVANDEQFETEHAIRLSQATYCDRHV FRGLLHRLIYERSRETTYPITYYLQEEDYQNQDKLRIYEAAGFQVFHQTKTYHLPFIPCEKATHSDWTLELVDYSRRADW LTFRNEHCHLLPSAMSMTDEQFAREVRQQTLFYSVKWNRQVIGIMKVRLHMYHISIQEMHVDCDEPLLRDAISFLQQKFF YMFRYIEEAHISATNLQPDLTYILRRHGTQISNICRYTYTLQAPPTPIYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34657; Mature: 34657
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRALRFVECRQLPLHERISIQSLYPLSKAPLLLSLPSHHHVYVALNRDAPLASIVANDE CCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEEEEECCCCCEEHEEECCH QFETEHAIRLSQATYCDRHVFRGLLHRLIYERSRETTYPITYYLQEEDYQNQDKLRIYEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEE AGFQVFHQTKTYHLPFIPCEKATHSDWTLELVDYSRRADWLTFRNEHCHLLPSAMSMTDE CCEEEEECCCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEECHHHHHCCHH QFAREVRQQTLFYSVKWNRQVIGIMKVRLHMYHISIQEMHVDCDEPLLRDAISFLQQKFF HHHHHHHHHHEEEEEECCCEEEHHHEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHH YMFRYIEEAHISATNLQPDLTYILRRHGTQISNICRYTYTLQAPPTPIYL HHHHHHHHHHCEECCCCHHHHHHHHHCCCHHHHEEEEEEEECCCCCCCCC >Mature Secondary Structure MKRALRFVECRQLPLHERISIQSLYPLSKAPLLLSLPSHHHVYVALNRDAPLASIVANDE CCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEEEEECCCCCEEHEEECCH QFETEHAIRLSQATYCDRHVFRGLLHRLIYERSRETTYPITYYLQEEDYQNQDKLRIYEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEE AGFQVFHQTKTYHLPFIPCEKATHSDWTLELVDYSRRADWLTFRNEHCHLLPSAMSMTDE CCEEEEECCCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEECHHHHHCCHH QFAREVRQQTLFYSVKWNRQVIGIMKVRLHMYHISIQEMHVDCDEPLLRDAISFLQQKFF HHHHHHHHHHEEEEEECCCEEEHHHEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHH YMFRYIEEAHISATNLQPDLTYILRRHGTQISNICRYTYTLQAPPTPIYL HHHHHHHHHHCEECCCCHHHHHHHHHCCCHHHHEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA