Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229918030
Identifier: 229918030
GI number: 229918030
Start: 2261873
End: 2262787
Strand: Reverse
Name: 229918030
Synonym: EAT1b_2309
Alternate gene names: NA
Gene position: 2262787-2261873 (Counterclockwise)
Preceding gene: 229918034
Following gene: 229918028
Centisome position: 75.43
GC content: 43.5
Gene sequence:
>915_bases ATGCGCATCGGAAAGTTACGCGTGTTGTTAGAACAGTATGGCGAGGCGACGTTACGCGATTTGCTCGTCGAAATGTACCG CCACACTCCTAAAGATGTGATTGATGATCAAGATTTTGATTTTATGATCAGCCAATACACGCGCTATAAAGAGAAAAAAA ATTCTGAAGAGCGACATTCGCTCTCGCAAACCATCACCTTGGCGGAACGGTTTGTTGATTCTGCGTATGAACATTTGTAC ATTCGTCCGAATCAAGTCATGTCAGAACGCGACCAAAAAAATTGGTACATCCACGCTAAAAAAATCATTCGCGATTTAGC ACATTACGCCGAGGAATATACAGAAGCACGGACGATGTATGAAGAAATGTTTTACCTCCTCTCTACATCGGCTGGCGAAG AACCGCTCTTCTCTACGAGTGACCCATTTCGTCTTTTAAAAATTTCACAAGTCACCATGCTCAAACAACTCATTCACTAT TATCAGCTCGATGCCCCGATTGATACCGTTTGGATTGACCGCGCCCTATACACCGCGCTCCACGTGCCAAAAGATGTTGA TTCTACACGAATCGATTTACTCTCAACGCTACCTATCGAACACAGTCATGCCAATACAAGAAAAATCCTCCACTCTCGTC TCTTAAAACTTTGCGATCGGATGTTAGAAAAGTCCCAAACAGAGGATACCGCGCTCGAAAACTATCAAGCGCTCAAGATG TTAGAACTCCGCCTTCTCGTCGCTGAAGGGAATTTGAAAGAAGCGGAACAAAAATTGTTCGCTGAATATATCCCATTCTT TTCTCATCGCTCCGAACCATTTCGGGTATATGTCGACTTTTTAGAGAGTCACGGACACACTAGTGAGACGAAGCGCTTAA AACGAATTGCTAAAGAAAAGCGAATCCGATTTTAA
Upstream 100 bases:
>100_bases CAAATGATTGTTTCAGATGAAAACCGGGAAAGGAATAATAATTGTTGTCTGCCCAAATCGAGATTGCCCTCGAGAAGCTT GACTGAAAGGAGGAGAGCTG
Downstream 100 bases:
>100_bases AAAAAGGGAGTCAATCGATGGGATCGATTGACTCCAATACATGATATGAACGAGGGGTGTTCATTTGAAAAGGAGGACAG AAAGTTGGTGCAGAACTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MRIGKLRVLLEQYGEATLRDLLVEMYRHTPKDVIDDQDFDFMISQYTRYKEKKNSEERHSLSQTITLAERFVDSAYEHLY IRPNQVMSERDQKNWYIHAKKIIRDLAHYAEEYTEARTMYEEMFYLLSTSAGEEPLFSTSDPFRLLKISQVTMLKQLIHY YQLDAPIDTVWIDRALYTALHVPKDVDSTRIDLLSTLPIEHSHANTRKILHSRLLKLCDRMLEKSQTEDTALENYQALKM LELRLLVAEGNLKEAEQKLFAEYIPFFSHRSEPFRVYVDFLESHGHTSETKRLKRIAKEKRIRF
Sequences:
>Translated_304_residues MRIGKLRVLLEQYGEATLRDLLVEMYRHTPKDVIDDQDFDFMISQYTRYKEKKNSEERHSLSQTITLAERFVDSAYEHLY IRPNQVMSERDQKNWYIHAKKIIRDLAHYAEEYTEARTMYEEMFYLLSTSAGEEPLFSTSDPFRLLKISQVTMLKQLIHY YQLDAPIDTVWIDRALYTALHVPKDVDSTRIDLLSTLPIEHSHANTRKILHSRLLKLCDRMLEKSQTEDTALENYQALKM LELRLLVAEGNLKEAEQKLFAEYIPFFSHRSEPFRVYVDFLESHGHTSETKRLKRIAKEKRIRF >Mature_304_residues MRIGKLRVLLEQYGEATLRDLLVEMYRHTPKDVIDDQDFDFMISQYTRYKEKKNSEERHSLSQTITLAERFVDSAYEHLY IRPNQVMSERDQKNWYIHAKKIIRDLAHYAEEYTEARTMYEEMFYLLSTSAGEEPLFSTSDPFRLLKISQVTMLKQLIHY YQLDAPIDTVWIDRALYTALHVPKDVDSTRIDLLSTLPIEHSHANTRKILHSRLLKLCDRMLEKSQTEDTALENYQALKM LELRLLVAEGNLKEAEQKLFAEYIPFFSHRSEPFRVYVDFLESHGHTSETKRLKRIAKEKRIRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36219; Mature: 36219
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGKLRVLLEQYGEATLRDLLVEMYRHTPKDVIDDQDFDFMISQYTRYKEKKNSEERHS CCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH LSQTITLAERFVDSAYEHLYIRPNQVMSERDQKNWYIHAKKIIRDLAHYAEEYTEARTMY HHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEMFYLLSTSAGEEPLFSTSDPFRLLKISQVTMLKQLIHYYQLDAPIDTVWIDRALYTAL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HVPKDVDSTRIDLLSTLPIEHSHANTRKILHSRLLKLCDRMLEKSQTEDTALENYQALKM HCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LELRLLVAEGNLKEAEQKLFAEYIPFFSHRSEPFRVYVDFLESHGHTSETKRLKRIAKEK HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH RIRF CCCC >Mature Secondary Structure MRIGKLRVLLEQYGEATLRDLLVEMYRHTPKDVIDDQDFDFMISQYTRYKEKKNSEERHS CCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH LSQTITLAERFVDSAYEHLYIRPNQVMSERDQKNWYIHAKKIIRDLAHYAEEYTEARTMY HHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEMFYLLSTSAGEEPLFSTSDPFRLLKISQVTMLKQLIHYYQLDAPIDTVWIDRALYTAL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HVPKDVDSTRIDLLSTLPIEHSHANTRKILHSRLLKLCDRMLEKSQTEDTALENYQALKM HCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LELRLLVAEGNLKEAEQKLFAEYIPFFSHRSEPFRVYVDFLESHGHTSETKRLKRIAKEK HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH RIRF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA