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The map label for this gene is yrkD [H]

Identifier: 229917769

GI number: 229917769

Start: 2000394

End: 2000660

Strand: Reverse

Name: yrkD [H]

Synonym: EAT1b_2047

Alternate gene names: 229917769

Gene position: 2000660-2000394 (Counterclockwise)

Preceding gene: 229917775

Following gene: 229917768

Centisome position: 66.69

GC content: 48.31

Gene sequence:

>267_bases
ATGGAACCGTATGTATACGATGCGAAAGTATTGAATCGCATGAAGCGAGTGGAAGGACAAATTCGCGCCATCATCCGAAT
GATGGAGGAAGGGAAAGAATGTCGCGATGTCGTGACGCAATTAAGTGCCGCACGTTCCGCACTCGACCGCGCTTCGACGA
TCATTGTGGCTAAGAACTTGGAACAATGTATCATCACCGCTCAAGCAGATGGCGAAGATACGTCCGAAACGGTGGAAGAA
GCCATTAAAATGTTGATGAAACGCTAG

Upstream 100 bases:

>100_bases
GGATAGTTGATGCTCGACACATACTCCCCCATGTATTAAGATGAGCCTACACAATAAATAGTTGGGTAACTGAACAATTT
TTCCTATAGAGGTGAATGAT

Downstream 100 bases:

>100_bases
TTCCCCTTGCTTTCCCTGTCCAAATGGGGGAAAGTTAGAGTAACGACTTACTAAGGGGGATTTCCTTGTGAACTTCGAAG
AAAAAGTAGAATCATTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MEPYVYDAKVLNRMKRVEGQIRAIIRMMEEGKECRDVVTQLSAARSALDRASTIIVAKNLEQCIITAQADGEDTSETVEE
AIKMLMKR

Sequences:

>Translated_88_residues
MEPYVYDAKVLNRMKRVEGQIRAIIRMMEEGKECRDVVTQLSAARSALDRASTIIVAKNLEQCIITAQADGEDTSETVEE
AIKMLMKR
>Mature_88_residues
MEPYVYDAKVLNRMKRVEGQIRAIIRMMEEGKECRDVVTQLSAARSALDRASTIIVAKNLEQCIITAQADGEDTSETVEE
AIKMLMKR

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9962; Mature: 9962

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPYVYDAKVLNRMKRVEGQIRAIIRMMEEGKECRDVVTQLSAARSALDRASTIIVAKNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQCIITAQADGEDTSETVEEAIKMLMKR
HHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPYVYDAKVLNRMKRVEGQIRAIIRMMEEGKECRDVVTQLSAARSALDRASTIIVAKNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQCIITAQADGEDTSETVEEAIKMLMKR
HHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]