Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is 229917768
Identifier: 229917768
GI number: 229917768
Start: 1999895
End: 2000326
Strand: Reverse
Name: 229917768
Synonym: EAT1b_2046
Alternate gene names: NA
Gene position: 2000326-1999895 (Counterclockwise)
Preceding gene: 229917769
Following gene: 229917767
Centisome position: 66.68
GC content: 46.99
Gene sequence:
>432_bases GTGAACTTCGAAGAAAAAGTAGAATCATTTAGAGCGCTCGCCGCTGAACGCAACATGACGTTCAAAGAGAGCGACACTGA AACGCACGTCACGTTCTTGACGCGTGAAACAACAAAATCCGGGGCTCAGCCCGTTATGATTATCGCTTTTAACAAAAAGA CGACAGATGCTGAGTTGTACGCTGCTACCGTCACGCACGTCCCAGATTACGTAGAAGATTTACCGATTCTTAATGCCTTG AACGAGTTCAACCAGGAGTTCAAATACTTCCGTTGTGTACTCGACAGCGATCGCGATGTCACACTCGCCTCAACACTCGA CCTCGACCTCGGTTTCTCACCGGAGATCATCTTGCAACATTCATTCATGATGTTCCAAGCGGCCGATGAAGTGAACGAGT ACATGCAAAAGCTGTACACACAAGTACAATAA
Upstream 100 bases:
>100_bases GAAGAAGCCATTAAAATGTTGATGAAACGCTAGTTCCCCTTGCTTTCCCTGTCCAAATGGGGGAAAGTTAGAGTAACGAC TTACTAAGGGGGATTTCCTT
Downstream 100 bases:
>100_bases TGAAAAGCCGTCCGGAAATGTTTCCGAGACGGCTTTTTTGAAACATCTGATCGACCTAGCTCGTATGATGAGACAAGGAG GCGATTCGACATGACACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNFEEKVESFRALAAERNMTFKESDTETHVTFLTRETTKSGAQPVMIIAFNKKTTDAELYAATVTHVPDYVEDLPILNAL NEFNQEFKYFRCVLDSDRDVTLASTLDLDLGFSPEIILQHSFMMFQAADEVNEYMQKLYTQVQ
Sequences:
>Translated_143_residues MNFEEKVESFRALAAERNMTFKESDTETHVTFLTRETTKSGAQPVMIIAFNKKTTDAELYAATVTHVPDYVEDLPILNAL NEFNQEFKYFRCVLDSDRDVTLASTLDLDLGFSPEIILQHSFMMFQAADEVNEYMQKLYTQVQ >Mature_143_residues MNFEEKVESFRALAAERNMTFKESDTETHVTFLTRETTKSGAQPVMIIAFNKKTTDAELYAATVTHVPDYVEDLPILNAL NEFNQEFKYFRCVLDSDRDVTLASTLDLDLGFSPEIILQHSFMMFQAADEVNEYMQKLYTQVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16496; Mature: 16496
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEEKVESFRALAAERNMTFKESDTETHVTFLTRETTKSGAQPVMIIAFNKKTTDAELY CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHH AATVTHVPDYVEDLPILNALNEFNQEFKYFRCVLDSDRDVTLASTLDLDLGFSPEIILQH HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH SFMMFQAADEVNEYMQKLYTQVQ HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNFEEKVESFRALAAERNMTFKESDTETHVTFLTRETTKSGAQPVMIIAFNKKTTDAELY CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHH AATVTHVPDYVEDLPILNALNEFNQEFKYFRCVLDSDRDVTLASTLDLDLGFSPEIILQH HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH SFMMFQAADEVNEYMQKLYTQVQ HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA