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The map label for this gene is ymaD [H]

Identifier: 229917650

GI number: 229917650

Start: 1886614

End: 1887075

Strand: Reverse

Name: ymaD [H]

Synonym: EAT1b_1927

Alternate gene names: 229917650

Gene position: 1887075-1886614 (Counterclockwise)

Preceding gene: 229917651

Following gene: 229917649

Centisome position: 62.9

GC content: 49.57

Gene sequence:

>462_bases
ATGAAACATACATTTAGCATGAACCTCGGCTGGGAGGGCGGACGAAATGACGTCGGCACCCTCGAGGCCGAGCGATTAAA
GACACAGATTTCAATTCCGCCAGAGATGGACGGTCCTGGAGTTGGCACGAATCCGGATGAGATGTTACTCGGGGCAGCGG
CAACGTGTTATATCATCACCCTCGCAGCCGTACTCGGGCGAAGTGATTTGACTCACCGTGGCATCACGATTGATGCAGAG
GGCATCGTCGATGTGACAAACGGCATCTTCACTTACGAGACAATTCGCTATGCGACAACGATTCATGTACCTACAGAGAT
GACCGACCGAGACATCACGCTTGTCGAGCGCATCGCGAAAAAAGCGAAAGATCAATGTATGATTTCACGCGCACTCGCAG
GAAATGTAGCATTTGAGTTGAATACCGTCATTTCACGTAAAAGTGGCAATGATTTTATTTGA

Upstream 100 bases:

>100_bases
ATCATCGAAACACTTCGCACATTCGCGAAACGTGCACAAGCATAACACATGCGCCTCCAATCGTTCTCTTTTACACTAGA
GACATTGGAGGCGATTTTTG

Downstream 100 bases:

>100_bases
AGAACCTTTGAAAAAAGCGATAATTGTAAACAGACGTAATCGCTTTGTCATGGACGTACTCGTTGATGATTTGCTCGCGC
CTTGCCATTGTCCTGTAACA

Product: OsmC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKHTFSMNLGWEGGRNDVGTLEAERLKTQISIPPEMDGPGVGTNPDEMLLGAAATCYIITLAAVLGRSDLTHRGITIDAE
GIVDVTNGIFTYETIRYATTIHVPTEMTDRDITLVERIAKKAKDQCMISRALAGNVAFELNTVISRKSGNDFI

Sequences:

>Translated_153_residues
MKHTFSMNLGWEGGRNDVGTLEAERLKTQISIPPEMDGPGVGTNPDEMLLGAAATCYIITLAAVLGRSDLTHRGITIDAE
GIVDVTNGIFTYETIRYATTIHVPTEMTDRDITLVERIAKKAKDQCMISRALAGNVAFELNTVISRKSGNDFI
>Mature_153_residues
MKHTFSMNLGWEGGRNDVGTLEAERLKTQISIPPEMDGPGVGTNPDEMLLGAAATCYIITLAAVLGRSDLTHRGITIDAE
GIVDVTNGIFTYETIRYATTIHVPTEMTDRDITLVERIAKKAKDQCMISRALAGNVAFELNTVISRKSGNDFI

Specific function: Unknown

COG id: COG1764

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the osmC/ohr family [H]

Homologues:

None

Paralogues:

None

Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR019905
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 16643; Mature: 16643

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTFSMNLGWEGGRNDVGTLEAERLKTQISIPPEMDGPGVGTNPDEMLLGAAATCYIIT
CCEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LAAVLGRSDLTHRGITIDAEGIVDVTNGIFTYETIRYATTIHVPTEMTDRDITLVERIAK
HHHHHCCCCCCCCCEEEECCCEEECCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHH
KAKDQCMISRALAGNVAFELNTVISRKSGNDFI
HHHHHHHHHHHHHCCEEEEEEHHEECCCCCCCC
>Mature Secondary Structure
MKHTFSMNLGWEGGRNDVGTLEAERLKTQISIPPEMDGPGVGTNPDEMLLGAAATCYIIT
CCEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LAAVLGRSDLTHRGITIDAEGIVDVTNGIFTYETIRYATTIHVPTEMTDRDITLVERIAK
HHHHHCCCCCCCCCEEEECCCEEECCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHH
KAKDQCMISRALAGNVAFELNTVISRKSGNDFI
HHHHHHHHHHHHHCCEEEEEEHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]