Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is sfsA [H]

Identifier: 229917649

GI number: 229917649

Start: 1885908

End: 1886627

Strand: Reverse

Name: sfsA [H]

Synonym: EAT1b_1926

Alternate gene names: 229917649

Gene position: 1886627-1885908 (Counterclockwise)

Preceding gene: 229917650

Following gene: 229917648

Centisome position: 62.89

GC content: 41.94

Gene sequence:

>720_bases
ATGATTTTATTTGAAGAACCTTTGAAAAAAGCGATAATTGTAAACAGACGTAATCGCTTTGTCATGGACGTACTCGTTGA
TGATTTGCTCGCGCCTTGCCATTGTCCTGTAACAGGAAGGATTGGAGATATTATATTTGAAAACATCCCCTGCCTCGTCT
CAGAAACCTATGACTCGAATCGTAAAACCCACTTTACAGTCGAAGCCATTTCAGTCGATGGTGAACAATGGATTGGAATC
AATCAAGGTCGTGTAAACGACTATGTTGAAGCTTTCTTACTCGAGAACCAGCTTGATGCTTTCTCAACCCCGAGGGGAAT
CAAACGTGAAATAGTAATTGAAGGTGCACGGATCGATTTTCAGATTGATGGAATCTTCATGGAAGTGAAGGCTCCGCTCA
GCGAACTACTCACTATTCCTCTCCCACACTTTAAACGTAGACGATTGAAACGACCCATCGAGACAGAACGGTTGATTCGT
CATCTCCACGCTCTGATTTCCACTCTACCCCAAACCGGAAGAGCAGTCCTCTTATATGTTTTTTTATATGACGCACCAAT
TTATACCGGTAATTCCAACCGAAAACAAGACCATCTAATTCGTCAATTGATTAACGATGCGATACCTTCCGGATTAGAAA
TATGGCAACTGAACTGCACTATTTCCCCTGAAGGAATTCGTTTACTTCGTTGCTTTGACACAACGTCTCACTTCAAGTAA

Upstream 100 bases:

>100_bases
CGCATCGCGAAAAAAGCGAAAGATCAATGTATGATTTCACGCGCACTCGCAGGAAATGTAGCATTTGAGTTGAATACCGT
CATTTCACGTAAAAGTGGCA

Downstream 100 bases:

>100_bases
CCAAATGTATTAAGTGAGACGTTATGTTTTTACTAAACATATGATATGTTGGGAATTACCGAATAGAGTCATTTTTCACT
TCCACTTTTTACGCGACTGC

Product: DNA-binding protein stimulates sugar fermentation-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSNRKTHFTVEAISVDGEQWIGI
NQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDFQIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIR
HLHALISTLPQTGRAVLLYVFLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK

Sequences:

>Translated_239_residues
MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSNRKTHFTVEAISVDGEQWIGI
NQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDFQIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIR
HLHALISTLPQTGRAVLLYVFLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK
>Mature_239_residues
MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSNRKTHFTVEAISVDGEQWIGI
NQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDFQIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIR
HLHALISTLPQTGRAVLLYVFLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005224 [H]

Pfam domain/function: PF03749 SfsA [H]

EC number: NA

Molecular weight: Translated: 27489; Mature: 27489

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSN
CCCCHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCC
RKTHFTVEAISVDGEQWIGINQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDF
CCEEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEE
QIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIRHLHALISTLPQTGRAVLLYV
EECCEEEEEHHCHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEE
FLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK
EECCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSN
CCCCHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCC
RKTHFTVEAISVDGEQWIGINQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDF
CCEEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEE
QIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIRHLHALISTLPQTGRAVLLYV
EECCEEEEEHHCHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEE
FLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK
EECCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA