Definition | Exiguobacterium sp. AT1b, complete genome. |
---|---|
Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is sfsA [H]
Identifier: 229917649
GI number: 229917649
Start: 1885908
End: 1886627
Strand: Reverse
Name: sfsA [H]
Synonym: EAT1b_1926
Alternate gene names: 229917649
Gene position: 1886627-1885908 (Counterclockwise)
Preceding gene: 229917650
Following gene: 229917648
Centisome position: 62.89
GC content: 41.94
Gene sequence:
>720_bases ATGATTTTATTTGAAGAACCTTTGAAAAAAGCGATAATTGTAAACAGACGTAATCGCTTTGTCATGGACGTACTCGTTGA TGATTTGCTCGCGCCTTGCCATTGTCCTGTAACAGGAAGGATTGGAGATATTATATTTGAAAACATCCCCTGCCTCGTCT CAGAAACCTATGACTCGAATCGTAAAACCCACTTTACAGTCGAAGCCATTTCAGTCGATGGTGAACAATGGATTGGAATC AATCAAGGTCGTGTAAACGACTATGTTGAAGCTTTCTTACTCGAGAACCAGCTTGATGCTTTCTCAACCCCGAGGGGAAT CAAACGTGAAATAGTAATTGAAGGTGCACGGATCGATTTTCAGATTGATGGAATCTTCATGGAAGTGAAGGCTCCGCTCA GCGAACTACTCACTATTCCTCTCCCACACTTTAAACGTAGACGATTGAAACGACCCATCGAGACAGAACGGTTGATTCGT CATCTCCACGCTCTGATTTCCACTCTACCCCAAACCGGAAGAGCAGTCCTCTTATATGTTTTTTTATATGACGCACCAAT TTATACCGGTAATTCCAACCGAAAACAAGACCATCTAATTCGTCAATTGATTAACGATGCGATACCTTCCGGATTAGAAA TATGGCAACTGAACTGCACTATTTCCCCTGAAGGAATTCGTTTACTTCGTTGCTTTGACACAACGTCTCACTTCAAGTAA
Upstream 100 bases:
>100_bases CGCATCGCGAAAAAAGCGAAAGATCAATGTATGATTTCACGCGCACTCGCAGGAAATGTAGCATTTGAGTTGAATACCGT CATTTCACGTAAAAGTGGCA
Downstream 100 bases:
>100_bases CCAAATGTATTAAGTGAGACGTTATGTTTTTACTAAACATATGATATGTTGGGAATTACCGAATAGAGTCATTTTTCACT TCCACTTTTTACGCGACTGC
Product: DNA-binding protein stimulates sugar fermentation-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSNRKTHFTVEAISVDGEQWIGI NQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDFQIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIR HLHALISTLPQTGRAVLLYVFLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK
Sequences:
>Translated_239_residues MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSNRKTHFTVEAISVDGEQWIGI NQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDFQIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIR HLHALISTLPQTGRAVLLYVFLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK >Mature_239_residues MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSNRKTHFTVEAISVDGEQWIGI NQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDFQIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIR HLHALISTLPQTGRAVLLYVFLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 27489; Mature: 27489
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSN CCCCHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCC RKTHFTVEAISVDGEQWIGINQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDF CCEEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEE QIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIRHLHALISTLPQTGRAVLLYV EECCEEEEEHHCHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEE FLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK EECCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCC >Mature Secondary Structure MILFEEPLKKAIIVNRRNRFVMDVLVDDLLAPCHCPVTGRIGDIIFENIPCLVSETYDSN CCCCHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCC RKTHFTVEAISVDGEQWIGINQGRVNDYVEAFLLENQLDAFSTPRGIKREIVIEGARIDF CCEEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEE QIDGIFMEVKAPLSELLTIPLPHFKRRRLKRPIETERLIRHLHALISTLPQTGRAVLLYV EECCEEEEEHHCHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEE FLYDAPIYTGNSNRKQDHLIRQLINDAIPSGLEIWQLNCTISPEGIRLLRCFDTTSHFK EECCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA