| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080752
Identifier: 227080752
GI number: 227080752
Start: 560208
End: 560417
Strand: Reverse
Name: 227080752
Synonym: VCM66_0527
Alternate gene names: NA
Gene position: 560417-560208 (Counterclockwise)
Preceding gene: 227080761
Following gene: 227080750
Centisome position: 19.37
GC content: 46.19
Gene sequence:
>210_bases GTGGGTGGCACTCTCGGCCACAAAGGACCTGCAGTAACGGTGGGTCGCAGGATTATAGAGAAGGGCGCAGAAAAAATCAC CTTTTTTTGCATGAAAAGAGAAAAAAAATCCACGCCTTACTGGGGAAGCCATTTTGTGCTCAGCCCAAGTGCTCCTTCGC TAAGTAATCATGACTTTGCATTTCAATTAAGCGTGATTGGCAGCGTTTAA
Upstream 100 bases:
>100_bases CAACGAAAGTTTTCATGCTAATAATAACCCGTTAATTTAAATTTACACTTCAAGGAGCTTTCGCTCCCACTGTCTAAGAG CCCAGTCATCACCCCTTCGA
Downstream 100 bases:
>100_bases ATTCAAATTCTAACAAACCATCGGTATACAGATCGGTAAGGGGCACTTCAGCAGAAATAATTAACTTTACATGTCGCTCA TAAAACTCATCCACCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MGGTLGHKGPAVTVGRRIIEKGAEKITFFCMKREKKSTPYWGSHFVLSPSAPSLSNHDFAFQLSVIGSV
Sequences:
>Translated_69_residues MGGTLGHKGPAVTVGRRIIEKGAEKITFFCMKREKKSTPYWGSHFVLSPSAPSLSNHDFAFQLSVIGSV >Mature_68_residues GGTLGHKGPAVTVGRRIIEKGAEKITFFCMKREKKSTPYWGSHFVLSPSAPSLSNHDFAFQLSVIGSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7494; Mature: 7363
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGTLGHKGPAVTVGRRIIEKGAEKITFFCMKREKKSTPYWGSHFVLSPSAPSLSNHDFA CCCCCCCCCCCHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE FQLSVIGSV EEEEEECCC >Mature Secondary Structure GGTLGHKGPAVTVGRRIIEKGAEKITFFCMKREKKSTPYWGSHFVLSPSAPSLSNHDFA CCCCCCCCCCHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEE FQLSVIGSV EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA