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The map label for this gene is yhcB [H]

Identifier: 227080750

GI number: 227080750

Start: 558584

End: 559021

Strand: Reverse

Name: yhcB [H]

Synonym: VCM66_0525

Alternate gene names: 227080750

Gene position: 559021-558584 (Counterclockwise)

Preceding gene: 227080752

Following gene: 227080749

Centisome position: 19.33

GC content: 46.58

Gene sequence:

>438_bases
ATGCCTTGGATCTATGCCATTGCTGGATTGCTAGTGGGGATTGCTGTCGGGATGCTGATTGCTCGTTTGACTACCCCTCA
ATATAAGACGCAGAAGAACCTGCAAAAAGAACTCGAGAGCGCAAAATTCACCTTAGAGCAGCAGCGCCAAGAACTGTCTG
ATCACTTTGCGCAGACAGCAGAAATGCTCGATACCCTAGGAAAAGATTACACTAAGCTGTATCAACACATGGCGAAAACC
GCTACCGATTTGATCCCCAATTTACCTGAGCAAGATAACCCATTCAGTAAATTGGCTCAGCAAAAAGAAGAGAGCAAACA
GCCAGAAGAGCTCGAACAACCACCTAAAGATTACGCATTGGGTGCCACAGGACTTTTGCGCGGTGAAGAAAAAGCAATCA
TTCGCTCAGCGGATTTGCTTAACGCCAAAGCCAGCTAA

Upstream 100 bases:

>100_bases
ATTTTGCTTTATCCAACTTGGGTCTCATAGTAACATGTCCCTCGTACATGTGTAACCGATGGGTAAAAAACATGTTAAAT
AACAACAATAAGGAGCTGTT

Downstream 100 bases:

>100_bases
TCGATTCCCGCTACTTTACGGTGAACTTTGTAAAGGTTTTTGAGTCATAACTCGCAGACTGTCAGTTGAAGTTTCTTGAA
ATGGACATATTTTCTACTTC

Product: cytochrome d ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit III [H]

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPWIYAIAGLLVGIAVGMLIARLTTPQYKTQKNLQKELESAKFTLEQQRQELSDHFAQTAEMLDTLGKDYTKLYQHMAKT
ATDLIPNLPEQDNPFSKLAQQKEESKQPEELEQPPKDYALGATGLLRGEEKAIIRSADLLNAKAS

Sequences:

>Translated_145_residues
MPWIYAIAGLLVGIAVGMLIARLTTPQYKTQKNLQKELESAKFTLEQQRQELSDHFAQTAEMLDTLGKDYTKLYQHMAKT
ATDLIPNLPEQDNPFSKLAQQKEESKQPEELEQPPKDYALGATGLLRGEEKAIIRSADLLNAKAS
>Mature_144_residues
PWIYAIAGLLVGIAVGMLIARLTTPQYKTQKNLQKELESAKFTLEQQRQELSDHFAQTAEMLDTLGKDYTKLYQHMAKTA
TDLIPNLPEQDNPFSKLAQQKEESKQPEELEQPPKDYALGATGLLRGEEKAIIRSADLLNAKAS

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1628 [H]

Homologues:

Organism=Escherichia coli, GI87082232, Length=127, Percent_Identity=44.8818897637795, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009386 [H]

Pfam domain/function: PF06295 DUF1043 [H]

EC number: NA

Molecular weight: Translated: 16259; Mature: 16128

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWIYAIAGLLVGIAVGMLIARLTTPQYKTQKNLQKELESAKFTLEQQRQELSDHFAQTA
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMLDTLGKDYTKLYQHMAKTATDLIPNLPEQDNPFSKLAQQKEESKQPEELEQPPKDYAL
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHC
GATGLLRGEEKAIIRSADLLNAKAS
CHHHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PWIYAIAGLLVGIAVGMLIARLTTPQYKTQKNLQKELESAKFTLEQQRQELSDHFAQTA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMLDTLGKDYTKLYQHMAKTATDLIPNLPEQDNPFSKLAQQKEESKQPEELEQPPKDYAL
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHC
GATGLLRGEEKAIIRSADLLNAKAS
CHHHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]