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The map label for this gene is yraP [C]

Identifier: 227080761

GI number: 227080761

Start: 565537

End: 566106

Strand: Reverse

Name: yraP [C]

Synonym: VCM66_0536

Alternate gene names: 227080761

Gene position: 566106-565537 (Counterclockwise)

Preceding gene: 227080762

Following gene: 227080752

Centisome position: 19.57

GC content: 46.49

Gene sequence:

>570_bases
ATGAAAAGCATTAGACTTCTTATCGTTTCCGGTTTGCTCGCCACTCTAACAGGGTGTGCCGGACTGTTTATCGCGGGTGC
CGCAACCACAGCCAATATTGTGACCGATCCGCGCAGCACGCAAGAGATCTGGCAAGATAACAATGTTGAACTTGAAGTTG
CAGGCCTTGCCAATAAAGAACCTTACCGCAAAGATGCGCGCATTTCTGCCGTTGCTTACCGTGGAACCGTCGTTTTATTG
GGACAGTCACGCAATGAAGCGATCTTAGAGCAATTTATTGCTCAGGCTCGTCAACTCAAAGGTGTCAAAGAGCTGCATAA
CCAAGTGCAAATTAAAGCGCCACTCTCCGTTGGTGAAATCAGCAACGATAGTTGGATAACCACCAAGGTAAAATCGGCGC
TTTTAACGAAATCTGAGCTCAACGGCATTAAAATTAAAGTGGTGACAGAGGATCGCGTCGTTTATCTGTTTGGATACGTT
TCTCCTGAACACGCAGAGATGGCCATTGGTGTCGCAAGAAATATCATAGGTGTGAAACAGGTTGTGAAGGCGTTTGATTA
CGCTCAGTAA

Upstream 100 bases:

>100_bases
CACACCGTACCGCTCGCATTCATGAAGTTCATATGGTAACGCTACACTGCCTATGTGATTTGATTGATCAAGTGTTATTC
CCAGCCCATGAAGAGTAAAT

Downstream 100 bases:

>100_bases
CGATTTTGAGAGTGGGATATGAAAAAGGCAGCGATGACCACTGCCTTTTTGATTTCATGAGATTTATTTACTTCACGACA
CGTAAACTCGGTTTGCCTCT

Product: putative hemolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKSIRLLIVSGLLATLTGCAGLFIAGAATTANIVTDPRSTQEIWQDNNVELEVAGLANKEPYRKDARISAVAYRGTVVLL
GQSRNEAILEQFIAQARQLKGVKELHNQVQIKAPLSVGEISNDSWITTKVKSALLTKSELNGIKIKVVTEDRVVYLFGYV
SPEHAEMAIGVARNIIGVKQVVKAFDYAQ

Sequences:

>Translated_189_residues
MKSIRLLIVSGLLATLTGCAGLFIAGAATTANIVTDPRSTQEIWQDNNVELEVAGLANKEPYRKDARISAVAYRGTVVLL
GQSRNEAILEQFIAQARQLKGVKELHNQVQIKAPLSVGEISNDSWITTKVKSALLTKSELNGIKIKVVTEDRVVYLFGYV
SPEHAEMAIGVARNIIGVKQVVKAFDYAQ
>Mature_189_residues
MKSIRLLIVSGLLATLTGCAGLFIAGAATTANIVTDPRSTQEIWQDNNVELEVAGLANKEPYRKDARISAVAYRGTVVLL
GQSRNEAILEQFIAQARQLKGVKELHNQVQIKAPLSVGEISNDSWITTKVKSALLTKSELNGIKIKVVTEDRVVYLFGYV
SPEHAEMAIGVARNIIGVKQVVKAFDYAQ

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=158, Percent_Identity=39.2405063291139, Blast_Score=110, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 20578; Mature: 20578

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIRLLIVSGLLATLTGCAGLFIAGAATTANIVTDPRSTQEIWQDNNVELEVAGLANKE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCEEEEEECCCCC
PYRKDARISAVAYRGTVVLLGQSRNEAILEQFIAQARQLKGVKELHNQVQIKAPLSVGEI
CCCCCCEEEEEEEECEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHEEEECCCEECCC
SNDSWITTKVKSALLTKSELNGIKIKVVTEDRVVYLFGYVSPEHAEMAIGVARNIIGVKQ
CCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
VVKAFDYAQ
HHHHHCCCC
>Mature Secondary Structure
MKSIRLLIVSGLLATLTGCAGLFIAGAATTANIVTDPRSTQEIWQDNNVELEVAGLANKE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCEEEEEECCCCC
PYRKDARISAVAYRGTVVLLGQSRNEAILEQFIAQARQLKGVKELHNQVQIKAPLSVGEI
CCCCCCEEEEEEEECEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHEEEECCCEECCC
SNDSWITTKVKSALLTKSELNGIKIKVVTEDRVVYLFGYVSPEHAEMAIGVARNIIGVKQ
CCCCEEHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
VVKAFDYAQ
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]