| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is zur [H]
Identifier: 227080590
GI number: 227080590
Start: 378234
End: 378701
Strand: Reverse
Name: zur [H]
Synonym: VCM66_0362
Alternate gene names: 227080590
Gene position: 378701-378234 (Counterclockwise)
Preceding gene: 227080600
Following gene: 227080589
Centisome position: 13.09
GC content: 43.8
Gene sequence:
>468_bases GTGATGGTGATGGTTTTGGACAACAAGCTAACCAAGCAAATTGAAGAAATATGTGCAGCAAGAGGGGTTCGCCTCACATC ACAGCGTAAAACTGTGTTTGAGCTGATCTGTGCCAGTAAACGCTCATCAAGTGCGTATGAACTGCTGGAAGATCTGAAAA AAAGTGAACCGCAAGCTAAACCTCCAACTGTATATCGAGCACTGGATTTTTTGCTAGAACAAGGCTTTATTCACCGAGTA GAGTCGACTAACAGCTTTATCTCTTGCTGTTCATGTAACGCTCATAAGCACTTCTCACATCTGTTGATTTGTGACCAGTG CGGTAACGTGATTGAATCTCGGGATGATAGTCTGGTAGCCTTGTTAGCAAGTAACGCGGAGAAACACGGTTTTACGATAA GCAACCATGTCATCGAATCACATGGGGTTTGTCAGACCTGTCTCTCGAAAGAGAAGAAGCAACAATAG
Upstream 100 bases:
>100_bases CAACAGGATGAGTTGACCTCGCATCTACTTTCATGTGGATTTTATTTTGTCGGTCAACGATATTCATCTCGACATAGTAT ATTATTACTAAAGTCCAACA
Downstream 100 bases:
>100_bases AAGAAGGTTATGCGCGCTGAATTTGTAAACCCGTTTTTAGCGTCTTTGATGAACGTGTTGAAAACCATGGCTTCCCTTGA GTTGAAGCCACAAAAACCAC
Product: putative zinc uptake regulation protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MMVMVLDNKLTKQIEEICAARGVRLTSQRKTVFELICASKRSSSAYELLEDLKKSEPQAKPPTVYRALDFLLEQGFIHRV ESTNSFISCCSCNAHKHFSHLLICDQCGNVIESRDDSLVALLASNAEKHGFTISNHVIESHGVCQTCLSKEKKQQ
Sequences:
>Translated_155_residues MMVMVLDNKLTKQIEEICAARGVRLTSQRKTVFELICASKRSSSAYELLEDLKKSEPQAKPPTVYRALDFLLEQGFIHRV ESTNSFISCCSCNAHKHFSHLLICDQCGNVIESRDDSLVALLASNAEKHGFTISNHVIESHGVCQTCLSKEKKQQ >Mature_155_residues MMVMVLDNKLTKQIEEICAARGVRLTSQRKTVFELICASKRSSSAYELLEDLKKSEPQAKPPTVYRALDFLLEQGFIHRV ESTNSFISCCSCNAHKHFSHLLICDQCGNVIESRDDSLVALLASNAEKHGFTISNHVIESHGVCQTCLSKEKKQQ
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=144, Percent_Identity=49.3055555555556, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17386; Mature: 17386
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVMVLDNKLTKQIEEICAARGVRLTSQRKTVFELICASKRSSSAYELLEDLKKSEPQAK CEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC PPTVYRALDFLLEQGFIHRVESTNSFISCCSCNAHKHFSHLLICDQCGNVIESRDDSLVA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHEEHHHHHHHHHCCCCCEEH LLASNAEKHGFTISNHVIESHGVCQTCLSKEKKQQ HHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MMVMVLDNKLTKQIEEICAARGVRLTSQRKTVFELICASKRSSSAYELLEDLKKSEPQAK CEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC PPTVYRALDFLLEQGFIHRVESTNSFISCCSCNAHKHFSHLLICDQCGNVIESRDDSLVA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHEEHHHHHHHHHCCCCCEEH LLASNAEKHGFTISNHVIESHGVCQTCLSKEKKQQ HHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]