Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

Click here to switch to the map view.

The map label for this gene is 227080589

Identifier: 227080589

GI number: 227080589

Start: 377763

End: 378224

Strand: Reverse

Name: 227080589

Synonym: VCM66_0361

Alternate gene names: NA

Gene position: 378224-377763 (Counterclockwise)

Preceding gene: 227080590

Following gene: 227080587

Centisome position: 13.08

GC content: 47.4

Gene sequence:

>462_bases
ATGCGCGCTGAATTTGTAAACCCGTTTTTAGCGTCTTTGATGAACGTGTTGAAAACCATGGCTTCCCTTGAGTTGAAGCC
ACAAAAACCACGGATTAAAAAAGACGAAATCGCTCGCGGCGATGTTTCTGGTCTGATCGGCATGATTGGCCCAACGACGC
GCGGTTCTATGTCGATCACTTTTGACGAGAGCCTTGCTTTGGAAATCATGCAAAATATGCTGGGTGAGCGTCCGAATGGT
TTAAATGAAGAAGTGACTGATATGGTCGGCGAGATCACCAATATGGTCACAGGTGGAGCGAAGCGAATTTTGGCAGAAAG
CGGCTTTGATTTTGATATGGCCACCCCCGTTGTCGTCTCCGGCCGAGGACACACAATTCGTCATAAGTGTGAAGGGGCAA
TCATACTGATGCCGTTTTCTTCTCCTTGGGGCAATGCGTTTATCGAAATCTGTTTCGAGTAA

Upstream 100 bases:

>100_bases
GGAGAAACACGGTTTTACGATAAGCAACCATGTCATCGAATCACATGGGGTTTGTCAGACCTGTCTCTCGAAAGAGAAGA
AGCAACAATAGAAGAAGGTT

Downstream 100 bases:

>100_bases
TTCAGCGCTCACGTTGGCAGCCACTGTTAGTTCATCGCTCTCAATGATCTTGATTAAACCGGACACTTTTGTCCGGTTTT
GTTTTCTCTGCTATCCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: CheC Domain Protein; CheC Domain-Containing Protein; CheC-Like Protein; Inhibitor Of MCP Methylation; Inhibitor Of MCP Methylation CheC-Like Protein; CheC-Like Family Protein; Chec Domain Protein; Inhibitor Of MCP Methylation CheC N; Chemotaxis Protein Phosphatase CheX; Chemotaxis Protein

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSITFDESLALEIMQNMLGERPNG
LNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVSGRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE

Sequences:

>Translated_153_residues
MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSITFDESLALEIMQNMLGERPNG
LNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVSGRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE
>Mature_153_residues
MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSITFDESLALEIMQNMLGERPNG
LNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVSGRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE

Specific function: Unknown

COG id: COG1406

COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16722; Mature: 16722

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSIT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCEEEE
FDESLALEIMQNMLGERPNGLNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVS
ECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEC
GRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE
CCCCEEEEECCCEEEEEECCCCCCCEEEEEECC
>Mature Secondary Structure
MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSIT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCEEEE
FDESLALEIMQNMLGERPNGLNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVS
ECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEC
GRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE
CCCCEEEEECCCEEEEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA