| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080589
Identifier: 227080589
GI number: 227080589
Start: 377763
End: 378224
Strand: Reverse
Name: 227080589
Synonym: VCM66_0361
Alternate gene names: NA
Gene position: 378224-377763 (Counterclockwise)
Preceding gene: 227080590
Following gene: 227080587
Centisome position: 13.08
GC content: 47.4
Gene sequence:
>462_bases ATGCGCGCTGAATTTGTAAACCCGTTTTTAGCGTCTTTGATGAACGTGTTGAAAACCATGGCTTCCCTTGAGTTGAAGCC ACAAAAACCACGGATTAAAAAAGACGAAATCGCTCGCGGCGATGTTTCTGGTCTGATCGGCATGATTGGCCCAACGACGC GCGGTTCTATGTCGATCACTTTTGACGAGAGCCTTGCTTTGGAAATCATGCAAAATATGCTGGGTGAGCGTCCGAATGGT TTAAATGAAGAAGTGACTGATATGGTCGGCGAGATCACCAATATGGTCACAGGTGGAGCGAAGCGAATTTTGGCAGAAAG CGGCTTTGATTTTGATATGGCCACCCCCGTTGTCGTCTCCGGCCGAGGACACACAATTCGTCATAAGTGTGAAGGGGCAA TCATACTGATGCCGTTTTCTTCTCCTTGGGGCAATGCGTTTATCGAAATCTGTTTCGAGTAA
Upstream 100 bases:
>100_bases GGAGAAACACGGTTTTACGATAAGCAACCATGTCATCGAATCACATGGGGTTTGTCAGACCTGTCTCTCGAAAGAGAAGA AGCAACAATAGAAGAAGGTT
Downstream 100 bases:
>100_bases TTCAGCGCTCACGTTGGCAGCCACTGTTAGTTCATCGCTCTCAATGATCTTGATTAAACCGGACACTTTTGTCCGGTTTT GTTTTCTCTGCTATCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: CheC Domain Protein; CheC Domain-Containing Protein; CheC-Like Protein; Inhibitor Of MCP Methylation; Inhibitor Of MCP Methylation CheC-Like Protein; CheC-Like Family Protein; Chec Domain Protein; Inhibitor Of MCP Methylation CheC N; Chemotaxis Protein Phosphatase CheX; Chemotaxis Protein
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSITFDESLALEIMQNMLGERPNG LNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVSGRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE
Sequences:
>Translated_153_residues MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSITFDESLALEIMQNMLGERPNG LNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVSGRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE >Mature_153_residues MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSITFDESLALEIMQNMLGERPNG LNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVSGRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE
Specific function: Unknown
COG id: COG1406
COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16722; Mature: 16722
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSIT CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCEEEE FDESLALEIMQNMLGERPNGLNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVS ECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEC GRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE CCCCEEEEECCCEEEEEECCCCCCCEEEEEECC >Mature Secondary Structure MRAEFVNPFLASLMNVLKTMASLELKPQKPRIKKDEIARGDVSGLIGMIGPTTRGSMSIT CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCEEEE FDESLALEIMQNMLGERPNGLNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPVVVS ECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEC GRGHTIRHKCEGAIILMPFSSPWGNAFIEICFE CCCCEEEEECCCEEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA