| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is coaA [H]
Identifier: 227080532
GI number: 227080532
Start: 318413
End: 319540
Strand: Reverse
Name: coaA [H]
Synonym: VCM66_0304
Alternate gene names: 227080532
Gene position: 319540-318413 (Counterclockwise)
Preceding gene: 227080542
Following gene: 227080529
Centisome position: 11.05
GC content: 43.88
Gene sequence:
>1128_bases GTGGTGCGCATTCTAGTGAATGATCTTGGGGGTTGCAACCCTTATCTTGAAAAAAAACTCAATTTTCAAAGGATTTTGCT TGTTCGTTGTTTTTTCAGTCAAATTAGAGCGCAATCGCTAATTCTCGCATCTTTCTATTTTGTTTTATCTTGTGCTTATT GTATTTTCGCTTTCCTTATTCTCAACCGCATGATTGAACCGATTATGAGCCCTTATTTAACCTTTGATCGCCAACACTGG GCCCAATTGCGCAATTCAGTACCTATGACGCTCTCTGAAAGCGATCTAAAAGAGTTACAGGGCATCAATGACCATTTATC GATGACCGAAGCGGTTGAAATCTATCTTCCCCTCGCTCGTCTACTGAATTTGTATGTGGCTGCGCGTCAAAGTCGTAATG GTGTGTTGCATCAGTTTTTGGGTAATACCGAATCAGCACCCCCTTTTGTGATTGGCATAGCGGGCAGCGTTGCCGTCGGT AAAAGTACAACGGCTCGCTTACTGAAAGCTCTCTTATCACGTTGGGAGAATCATCCGAAGGTCGAACTGATCACCACAGA CGGCTTTTTATACCCCAATAAGGTACTGACTGAACGTGGCATTATGCATAAGAAGGGCTTTCCTGAATCTTATGATATTC GCCGTTTGGTGGAATTTGTTTCTGAGGTTAAAGCTGGCCAGCCCAATGTAACCGCCCCCGTTTATTCACATCTCACTTAT GATATTACCGATGAAATGAAAGTGGTCGACCGCCCGGATGTGCTGATCATTGAAGGCTTAAATGTACTGCAAAGTGGTAT GGACTACCCTCATGACCCACACCGCGTATTTATCTCTGATTTCCTGGATTTTTCGATTTATGTCGATGCCGATAGTCAAC TGATAGAAAAGTGGTATATCGAGCGCTTTATGAAATTTCGCCAGGGTGCATTTAAAAAGCCCGGCTCCTATTTCAGCCAC TACACTGCACTCACTGAAGCCCAAGCTGAACAGAAAGCGCGTTCCATTTGGGAAACCATCAACGGTAAAAATCTGGTTGA GAATATCTTGCCGACCAAAGGTCGTGCACATTTGATTTTACGCAAAGGGCTTAACCATACGGTAGAAGAAGTCCTGCTCC GTAAATAG
Upstream 100 bases:
>100_bases TTCACTGCTAGTGGAGAAAATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT ACTGAGCTAAGTCGGCATAA
Downstream 100 bases:
>100_bases TGCTCAAGAAAAAGAGGCTGACGCCTCTTTATTTGGCTTTAATTCTGCTCTAGTCGTTTTTACGTAGGGATATCTCACCG CCAATAAAACTTTTCAACCC
Product: pantothenate kinase
Products: NA
Alternate protein names: Pantothenic acid kinase [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MVRILVNDLGGCNPYLEKKLNFQRILLVRCFFSQIRAQSLILASFYFVLSCAYCIFAFLILNRMIEPIMSPYLTFDRQHW AQLRNSVPMTLSESDLKELQGINDHLSMTEAVEIYLPLARLLNLYVAARQSRNGVLHQFLGNTESAPPFVIGIAGSVAVG KSTTARLLKALLSRWENHPKVELITTDGFLYPNKVLTERGIMHKKGFPESYDIRRLVEFVSEVKAGQPNVTAPVYSHLTY DITDEMKVVDRPDVLIIEGLNVLQSGMDYPHDPHRVFISDFLDFSIYVDADSQLIEKWYIERFMKFRQGAFKKPGSYFSH YTALTEAQAEQKARSIWETINGKNLVENILPTKGRAHLILRKGLNHTVEEVLLRK
Sequences:
>Translated_375_residues MVRILVNDLGGCNPYLEKKLNFQRILLVRCFFSQIRAQSLILASFYFVLSCAYCIFAFLILNRMIEPIMSPYLTFDRQHW AQLRNSVPMTLSESDLKELQGINDHLSMTEAVEIYLPLARLLNLYVAARQSRNGVLHQFLGNTESAPPFVIGIAGSVAVG KSTTARLLKALLSRWENHPKVELITTDGFLYPNKVLTERGIMHKKGFPESYDIRRLVEFVSEVKAGQPNVTAPVYSHLTY DITDEMKVVDRPDVLIIEGLNVLQSGMDYPHDPHRVFISDFLDFSIYVDADSQLIEKWYIERFMKFRQGAFKKPGSYFSH YTALTEAQAEQKARSIWETINGKNLVENILPTKGRAHLILRKGLNHTVEEVLLRK >Mature_375_residues MVRILVNDLGGCNPYLEKKLNFQRILLVRCFFSQIRAQSLILASFYFVLSCAYCIFAFLILNRMIEPIMSPYLTFDRQHW AQLRNSVPMTLSESDLKELQGINDHLSMTEAVEIYLPLARLLNLYVAARQSRNGVLHQFLGNTESAPPFVIGIAGSVAVG KSTTARLLKALLSRWENHPKVELITTDGFLYPNKVLTERGIMHKKGFPESYDIRRLVEFVSEVKAGQPNVTAPVYSHLTY DITDEMKVVDRPDVLIIEGLNVLQSGMDYPHDPHRVFISDFLDFSIYVDADSQLIEKWYIERFMKFRQGAFKKPGSYFSH YTALTEAQAEQKARSIWETINGKNLVENILPTKGRAHLILRKGLNHTVEEVLLRK
Specific function: Coenzyme A (CoA) biosynthesis; first step. [C]
COG id: COG1072
COG function: function code H; Panthothenate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic pantothenate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790409, Length=311, Percent_Identity=64.3086816720257, Blast_Score=420, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004566 - InterPro: IPR006083 [H]
Pfam domain/function: PF00485 PRK [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 42959; Mature: 42959
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRILVNDLGGCNPYLEKKLNFQRILLVRCFFSQIRAQSLILASFYFVLSCAYCIFAFLI CEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNRMIEPIMSPYLTFDRQHWAQLRNSVPMTLSESDLKELQGINDHLSMTEAVEIYLPLAR HHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH LLNLYVAARQSRNGVLHQFLGNTESAPPFVIGIAGSVAVGKSTTARLLKALLSRWENHPK HHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC VELITTDGFLYPNKVLTERGIMHKKGFPESYDIRRLVEFVSEVKAGQPNVTAPVYSHLTY EEEEEECCCCCCCHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHEEE DITDEMKVVDRPDVLIIEGLNVLQSGMDYPHDPHRVFISDFLDFSIYVDADSQLIEKWYI CCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHH ERFMKFRQGAFKKPGSYFSHYTALTEAQAEQKARSIWETINGKNLVENILPTKGRAHLIL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH RKGLNHTVEEVLLRK HHCCCHHHHHHHHCC >Mature Secondary Structure MVRILVNDLGGCNPYLEKKLNFQRILLVRCFFSQIRAQSLILASFYFVLSCAYCIFAFLI CEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNRMIEPIMSPYLTFDRQHWAQLRNSVPMTLSESDLKELQGINDHLSMTEAVEIYLPLAR HHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH LLNLYVAARQSRNGVLHQFLGNTESAPPFVIGIAGSVAVGKSTTARLLKALLSRWENHPK HHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC VELITTDGFLYPNKVLTERGIMHKKGFPESYDIRRLVEFVSEVKAGQPNVTAPVYSHLTY EEEEEECCCCCCCHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHEEE DITDEMKVVDRPDVLIIEGLNVLQSGMDYPHDPHRVFISDFLDFSIYVDADSQLIEKWYI CCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHH ERFMKFRQGAFKKPGSYFSHYTALTEAQAEQKARSIWETINGKNLVENILPTKGRAHLIL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH RKGLNHTVEEVLLRK HHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]