| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080529
Identifier: 227080529
GI number: 227080529
Start: 315872
End: 316318
Strand: Reverse
Name: 227080529
Synonym: VCM66_0301
Alternate gene names: NA
Gene position: 316318-315872 (Counterclockwise)
Preceding gene: 227080532
Following gene: 227080527
Centisome position: 10.94
GC content: 45.64
Gene sequence:
>447_bases ATGGCCGACAAGCACGAAAGACCAATGTTAGAGTTTCAGCAATTTGCCCCCATTAAGCTCCCGCTTATCAAACGTTTTTA TAAAAACCACTATCCAGGGAGCAAACCCAAAAGTGATGAACAGGTGATTGTTGCTCTCAAGGATCGTGAGATCGTGGGCG TGGTACGTTTTCGTATGATTGGTCAATATCGCCTACTGACTGGCATGGCAGTGGAAGCCCAGAGCCGTCAACAAGGGATT GGTAAGCAACTGCTCGACTACTGCCAAAAGCAATGGCTCAATCCAGCAACCTTTTGTTTTGCTTATACCCATCTCGAACA TTTCTATCAGCAAGGCCATTTTATTCAAATTGCACCTCATGCTTTACCCGCCGAGCTCCATCTACTCTTTGAGCGTTACT CGAGATCTGGTAAGGATCTCATTCCGATGCAATATCAAGCGAAGTAA
Upstream 100 bases:
>100_bases ACTGTTCAATACCAAAGGTGTGGTAGGGTTTGAGGTTCGCACCGAGTTGAATTTGCATGGTCGTCTTTGGATAACTTAAA CTGGCCATATTCTACCTCAG
Downstream 100 bases:
>100_bases TGTCAAGAATGGTCGCCATTTCTAGCCTTTTCTTAACCAGTTTTGGTAATATCCACTGCTCGCAATTTTGCACACAACAA GGTAATGCATCCCAATGATT
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; Acetyltransferase
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MADKHERPMLEFQQFAPIKLPLIKRFYKNHYPGSKPKSDEQVIVALKDREIVGVVRFRMIGQYRLLTGMAVEAQSRQQGI GKQLLDYCQKQWLNPATFCFAYTHLEHFYQQGHFIQIAPHALPAELHLLFERYSRSGKDLIPMQYQAK
Sequences:
>Translated_148_residues MADKHERPMLEFQQFAPIKLPLIKRFYKNHYPGSKPKSDEQVIVALKDREIVGVVRFRMIGQYRLLTGMAVEAQSRQQGI GKQLLDYCQKQWLNPATFCFAYTHLEHFYQQGHFIQIAPHALPAELHLLFERYSRSGKDLIPMQYQAK >Mature_147_residues ADKHERPMLEFQQFAPIKLPLIKRFYKNHYPGSKPKSDEQVIVALKDREIVGVVRFRMIGQYRLLTGMAVEAQSRQQGIG KQLLDYCQKQWLNPATFCFAYTHLEHFYQQGHFIQIAPHALPAELHLLFERYSRSGKDLIPMQYQAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17393; Mature: 17261
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKHERPMLEFQQFAPIKLPLIKRFYKNHYPGSKPKSDEQVIVALKDREIVGVVRFRMI CCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHH GQYRLLTGMAVEAQSRQQGIGKQLLDYCQKQWLNPATFCFAYTHLEHFYQQGHFIQIAPH HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCC ALPAELHLLFERYSRSGKDLIPMQYQAK CCCHHHHHHHHHHCCCCCCCCCCEECCC >Mature Secondary Structure ADKHERPMLEFQQFAPIKLPLIKRFYKNHYPGSKPKSDEQVIVALKDREIVGVVRFRMI CCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHH GQYRLLTGMAVEAQSRQQGIGKQLLDYCQKQWLNPATFCFAYTHLEHFYQQGHFIQIAPH HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCC ALPAELHLLFERYSRSGKDLIPMQYQAK CCCHHHHHHHHHHCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA