Click here to switch to the map view.

The map label for this gene is 227080448

Identifier: 227080448

GI number: 227080448

Start: 218699

End: 219658

Strand: Direct

Name: 227080448

Synonym: VCM66_0216

Alternate gene names: NA

Gene position: 218699-219658 (Clockwise)

Preceding gene: 227080447

Following gene: 227080460

Centisome position: 7.56

GC content: 32.6

Gene sequence:

>960_bases
ATGCTATTCGATCAGATTACATTCGTAATTCAAGGACCTATTACACCGTCCATTACCTCCACATCTGTTCGACGTTTACG
ATCAATTTTCCCAGGCTGTCAAATTATCGTATCTACTTGGGAAGGAGAAAATACGCAAGATATTGAAGCTGATCTTATTA
TTTATAATAAAGATCCAGGTTCAACTATATTTGTATATAGTAAACGAAATGATGCTATACCTGTTAATATAAATCGACAA
ATTGTGTCAACTGTTTCTGGATTACGCCATGTAAAAACTAAATTTGCAGCGAAATTGAGAGCTGATAATATTTTAAACAA
AAGAAGGGTGTTAGAAATTTTTGAGCAATTTCCTTTACGTAAGGAGGGTTATGCAGTTCTGAATAACAGGCTTGTTTGTT
CTAATTATTTCGCGAAGGAGTTTGAGAGGGGGCTAAGTGTACCTTTCTTCTTCTCTGATTTTTTCCAATTTGGTGAGGTT
GAAGATCTACTTAAAGTATGGGATTGTGATTTATATAGTGATTATGATTTCAAATCAACATTGAGCGGTAAGAAGCAGCA
CAAATATTATCCAAATGACAGTGTTAATGTAGAGCAGAAAATTTGGAGCAATGCAGCAAGAAAACTATATCCTTATGAAT
TAAAAGATGAACATGGTGATCATTTTGCAAGGCAACAATCGTATAATTTTATGATAAATAATCTTATCATTGTTGACGGA
GATGAACTTGGATTAGACGTACCACAACGTCTTCGACACTCAAATAGCTATCCCTACGATTTTTTTACGTTTCAAAGATG
GAAATGGTTGTATGAAAACGAGTTTTTAAAAACTAAAAACACTCCATTAAACTTCAAATTTTTTTGGTATTTGTCACTTA
TAATTAAGACTATTAGGAAAGGAGTTAGGCTAAAATTAAGAAAAACCTTAACTCCTATTTTTATTAAAGTTAGAGAGTGA

Upstream 100 bases:

>100_bases
ATTGAAGAGGTCGTTTGAGAAAGAAGTCTGCAAGCGAGGGATTAATTGGAGTCTTGAAGCGTTTGCTATTATTTCTAGCT
ATAAACATGAAGAGTAAAAT

Downstream 100 bases:

>100_bases
TATTTAATTAAAAGAATGGATCTTTTTGAGTATACGGCCTATTTGATTTCTATAGTAACGGTATAGACGTTTCTTATCAT
ATGGTATTGATGTTATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLFDQITFVIQGPITPSITSTSVRRLRSIFPGCQIIVSTWEGENTQDIEADLIIYNKDPGSTIFVYSKRNDAIPVNINRQ
IVSTVSGLRHVKTKFAAKLRADNILNKRRVLEIFEQFPLRKEGYAVLNNRLVCSNYFAKEFERGLSVPFFFSDFFQFGEV
EDLLKVWDCDLYSDYDFKSTLSGKKQHKYYPNDSVNVEQKIWSNAARKLYPYELKDEHGDHFARQQSYNFMINNLIIVDG
DELGLDVPQRLRHSNSYPYDFFTFQRWKWLYENEFLKTKNTPLNFKFFWYLSLIIKTIRKGVRLKLRKTLTPIFIKVRE

Sequences:

>Translated_319_residues
MLFDQITFVIQGPITPSITSTSVRRLRSIFPGCQIIVSTWEGENTQDIEADLIIYNKDPGSTIFVYSKRNDAIPVNINRQ
IVSTVSGLRHVKTKFAAKLRADNILNKRRVLEIFEQFPLRKEGYAVLNNRLVCSNYFAKEFERGLSVPFFFSDFFQFGEV
EDLLKVWDCDLYSDYDFKSTLSGKKQHKYYPNDSVNVEQKIWSNAARKLYPYELKDEHGDHFARQQSYNFMINNLIIVDG
DELGLDVPQRLRHSNSYPYDFFTFQRWKWLYENEFLKTKNTPLNFKFFWYLSLIIKTIRKGVRLKLRKTLTPIFIKVRE
>Mature_319_residues
MLFDQITFVIQGPITPSITSTSVRRLRSIFPGCQIIVSTWEGENTQDIEADLIIYNKDPGSTIFVYSKRNDAIPVNINRQ
IVSTVSGLRHVKTKFAAKLRADNILNKRRVLEIFEQFPLRKEGYAVLNNRLVCSNYFAKEFERGLSVPFFFSDFFQFGEV
EDLLKVWDCDLYSDYDFKSTLSGKKQHKYYPNDSVNVEQKIWSNAARKLYPYELKDEHGDHFARQQSYNFMINNLIIVDG
DELGLDVPQRLRHSNSYPYDFFTFQRWKWLYENEFLKTKNTPLNFKFFWYLSLIIKTIRKGVRLKLRKTLTPIFIKVRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37736; Mature: 37736

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFDQITFVIQGPITPSITSTSVRRLRSIFPGCQIIVSTWEGENTQDIEADLIIYNKDPG
CCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCC
STIFVYSKRNDAIPVNINRQIVSTVSGLRHVKTKFAAKLRADNILNKRRVLEIFEQFPLR
CEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KEGYAVLNNRLVCSNYFAKEFERGLSVPFFFSDFFQFGEVEDLLKVWDCDLYSDYDFKST
CCCHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHH
LSGKKQHKYYPNDSVNVEQKIWSNAARKLYPYELKDEHGDHFARQQSYNFMINNLIIVDG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEEEECC
DELGLDVPQRLRHSNSYPYDFFTFQRWKWLYENEFLKTKNTPLNFKFFWYLSLIIKTIRK
CCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHH
GVRLKLRKTLTPIFIKVRE
HHEEEHHHCCCEEEEEEEC
>Mature Secondary Structure
MLFDQITFVIQGPITPSITSTSVRRLRSIFPGCQIIVSTWEGENTQDIEADLIIYNKDPG
CCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCC
STIFVYSKRNDAIPVNINRQIVSTVSGLRHVKTKFAAKLRADNILNKRRVLEIFEQFPLR
CEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KEGYAVLNNRLVCSNYFAKEFERGLSVPFFFSDFFQFGEVEDLLKVWDCDLYSDYDFKST
CCCHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHH
LSGKKQHKYYPNDSVNVEQKIWSNAARKLYPYELKDEHGDHFARQQSYNFMINNLIIVDG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEEEECC
DELGLDVPQRLRHSNSYPYDFFTFQRWKWLYENEFLKTKNTPLNFKFFWYLSLIIKTIRK
CCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHH
GVRLKLRKTLTPIFIKVRE
HHEEEHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA