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The map label for this gene is 226951023

Identifier: 226951023

GI number: 226951023

Start: 4081708

End: 4082277

Strand: Direct

Name: 226951023

Synonym: CLM_4060

Alternate gene names: NA

Gene position: 4081708-4082277 (Clockwise)

Preceding gene: 226951022

Following gene: 226951024

Centisome position: 98.23

GC content: 22.81

Gene sequence:

>570_bases
TTGAAAAAATCTATTAAATTAGCTTTTTGCTCATCTTTAATAATTTCTTCGGTATTTTTTATATCCTGTGAAAAAAAAGA
TAGCATAAGTATAAATAACAAAGATAAAATAAAGAATATAACACTTCATAACGAAAAAAATAATTTAGTAGATTTAAACT
TATATTTTGATTCTACTAATAATGCAAATAATGCTGAAATAACTAAAGAAGAAAGAATTATTAAAAAGGATGAACTTATT
GGTCAATTTATAATTGGGGAATTAATAAAAGGTCCTTCTGTTAATAATTCATTAAAACCAATCTTCCCGAAAGAAACAAG
ACTACTAAGTTTTTCTATAAAAAACAACATAGCTTATGTTAATTTAAGTAGTGAAGCTTATTATTCTATGACTGCGGATA
AGGAAGAAGCTTATTTAAAAAGCATCATTTGGTCTTTAACAGAACTACCTTCAATAAAGAAGGTAAAGTTATTTATTGAA
AATAAAGATATCTCTTCTCTTAGTAAAAATTTTAAATTTAGTGAACCTATAGGAAGAGATGATATAACAAAAATAAATAA
AAATAAATAA

Upstream 100 bases:

>100_bases
AACTCTTCTGATATTAGAGTAGGTAAAGAACTTTCTTTATCCGTTGCTAAAAGAGATACTCCAAGTAACTATATAGAATT
TTAGGGTAAGGTGATTAAAT

Downstream 100 bases:

>100_bases
AAGGAGAATGTATCATGAGTTTGTATAAAGAATGGACAGACATGGTTATTGATTATGTAAAAACTAAAGGAGAAGCTGCA
TTTTGGAAAGAATACGGTTC

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein LpqB GerMN Domain Protein; Lipoprotein LpqB GerMN Domain; Spore Germination Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKSIKLAFCSSLIISSVFFISCEKKDSISINNKDKIKNITLHNEKNNLVDLNLYFDSTNNANNAEITKEERIIKKDELI
GQFIIGELIKGPSVNNSLKPIFPKETRLLSFSIKNNIAYVNLSSEAYYSMTADKEEAYLKSIIWSLTELPSIKKVKLFIE
NKDISSLSKNFKFSEPIGRDDITKINKNK

Sequences:

>Translated_189_residues
MKKSIKLAFCSSLIISSVFFISCEKKDSISINNKDKIKNITLHNEKNNLVDLNLYFDSTNNANNAEITKEERIIKKDELI
GQFIIGELIKGPSVNNSLKPIFPKETRLLSFSIKNNIAYVNLSSEAYYSMTADKEEAYLKSIIWSLTELPSIKKVKLFIE
NKDISSLSKNFKFSEPIGRDDITKINKNK
>Mature_189_residues
MKKSIKLAFCSSLIISSVFFISCEKKDSISINNKDKIKNITLHNEKNNLVDLNLYFDSTNNANNAEITKEERIIKKDELI
GQFIIGELIKGPSVNNSLKPIFPKETRLLSFSIKNNIAYVNLSSEAYYSMTADKEEAYLKSIIWSLTELPSIKKVKLFIE
NKDISSLSKNFKFSEPIGRDDITKINKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21564; Mature: 21564

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIKLAFCSSLIISSVFFISCEKKDSISINNKDKIKNITLHNEKNNLVDLNLYFDSTN
CCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCC
NANNAEITKEERIIKKDELIGQFIIGELIKGPSVNNSLKPIFPKETRLLSFSIKNNIAYV
CCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEE
NLSSEAYYSMTADKEEAYLKSIIWSLTELPSIKKVKLFIENKDISSLSKNFKFSEPIGRD
EECCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCC
DITKINKNK
CCCCCCCCC
>Mature Secondary Structure
MKKSIKLAFCSSLIISSVFFISCEKKDSISINNKDKIKNITLHNEKNNLVDLNLYFDSTN
CCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCC
NANNAEITKEERIIKKDELIGQFIIGELIKGPSVNNSLKPIFPKETRLLSFSIKNNIAYV
CCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEE
NLSSEAYYSMTADKEEAYLKSIIWSLTELPSIKKVKLFIENKDISSLSKNFKFSEPIGRD
EECCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCC
DITKINKNK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA