| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is yecA [C]
Identifier: 226951024
GI number: 226951024
Start: 4082292
End: 4082795
Strand: Direct
Name: yecA [C]
Synonym: CLM_4061
Alternate gene names: 226951024
Gene position: 4082292-4082795 (Clockwise)
Preceding gene: 226951023
Following gene: 226951025
Centisome position: 98.24
GC content: 30.36
Gene sequence:
>504_bases ATGAGTTTGTATAAAGAATGGACAGACATGGTTATTGATTATGTAAAAACTAAAGGAGAAGCTGCATTTTGGAAAGAATA CGGTTCAATCGAGGAAAATGTTTATACCCAAATATTAGGTGAACATAGCAGCGTTATAGAAGGTACAGTAAAAAATTTAG CGGAAAAATTTAATACACCTGTAGTATTCTTCATGGGATTCTTAGATGGAATAAATGACAGTTTAACTGATTCTTTAGAT TTGGACAAGATAGAAGAAAGCTCTAACATTTCTCTTAAAATAGATTTTGAAAAATTATACTTCAATATGTTAGAAGCTAA GGCAGATTACTTATATAATCTTCCTCAATGGGAAGCTATACTTTCTAAAGAAAAAAGAAAAGAAGTACATAAGGAGTGGG TTTCTTCAAAAACTGTAGTTAGAACTAATAAAATTGGTAGAAATGAACCTTGTCCTTGCGGAAGCGGTAAAAAATATAAA AATTGTTGCGCAAAAAAAGCTTAA
Upstream 100 bases:
>100_bases AAGATATCTCTTCTCTTAGTAAAAATTTTAAATTTAGTGAACCTATAGGAAGAGATGATATAACAAAAATAAATAAAAAT AAATAAAAGGAGAATGTATC
Downstream 100 bases:
>100_bases AACAAAAATTTTTAATAAAATCTTCTAGATGATTTATAATACCTATATTTAATAAATATGGAACTAAGAGGTTTATCAAT AAATAAAATTTATTTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: SEC-C Domain-Containing Protein Domain-Containing Protein; SEC-C Domain Protein; Sec-C Motif Domain Protein; SEC-C Motif Domain-Containing Protein; Preprotein Translocase SecA Subunit; SEC-C Domain-Containing Protein
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSLYKEWTDMVIDYVKTKGEAAFWKEYGSIEENVYTQILGEHSSVIEGTVKNLAEKFNTPVVFFMGFLDGINDSLTDSLD LDKIEESSNISLKIDFEKLYFNMLEAKADYLYNLPQWEAILSKEKRKEVHKEWVSSKTVVRTNKIGRNEPCPCGSGKKYK NCCAKKA
Sequences:
>Translated_167_residues MSLYKEWTDMVIDYVKTKGEAAFWKEYGSIEENVYTQILGEHSSVIEGTVKNLAEKFNTPVVFFMGFLDGINDSLTDSLD LDKIEESSNISLKIDFEKLYFNMLEAKADYLYNLPQWEAILSKEKRKEVHKEWVSSKTVVRTNKIGRNEPCPCGSGKKYK NCCAKKA >Mature_166_residues SLYKEWTDMVIDYVKTKGEAAFWKEYGSIEENVYTQILGEHSSVIEGTVKNLAEKFNTPVVFFMGFLDGINDSLTDSLDL DKIEESSNISLKIDFEKLYFNMLEAKADYLYNLPQWEAILSKEKRKEVHKEWVSSKTVVRTNKIGRNEPCPCGSGKKYKN CCAKKA
Specific function: Unknown
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19203; Mature: 19072
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYKEWTDMVIDYVKTKGEAAFWKEYGSIEENVYTQILGEHSSVIEGTVKNLAEKFNTP CCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC VVFFMGFLDGINDSLTDSLDLDKIEESSNISLKIDFEKLYFNMLEAKADYLYNLPQWEAI HHHHHHHHHCCCHHHHCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH LSKEKRKEVHKEWVSSKTVVRTNKIGRNEPCPCGSGKKYKNCCAKKA HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure SLYKEWTDMVIDYVKTKGEAAFWKEYGSIEENVYTQILGEHSSVIEGTVKNLAEKFNTP CHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC VVFFMGFLDGINDSLTDSLDLDKIEESSNISLKIDFEKLYFNMLEAKADYLYNLPQWEAI HHHHHHHHHCCCHHHHCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH LSKEKRKEVHKEWVSSKTVVRTNKIGRNEPCPCGSGKKYKNCCAKKA HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA