Click here to switch to the map view.

The map label for this gene is yycJ [H]

Identifier: 226951022

GI number: 226951022

Start: 4080906

End: 4081691

Strand: Direct

Name: yycJ [H]

Synonym: CLM_4059

Alternate gene names: 226951022

Gene position: 4080906-4081691 (Clockwise)

Preceding gene: 226951021

Following gene: 226951023

Centisome position: 98.21

GC content: 29.26

Gene sequence:

>786_bases
ATGATTTTTTGTTCTCTTTATAGTGGTAGTAGTGGTAATTCCATATTTATATCCTCTGAAAAATCAAAAATACTGATAGA
TGCTGGACTTTCTGGTAAAAGCATAGAATTAGCTTTAGATCGTATAAAAGAATCTCCTTCATCTATAAATGGAATATTTG
TTACCCATGAACATATAGACCACATAAAAGGCGTAGGTGTTCTATCCCGAAAATATGATATACCTATATACGCTAATGCT
AAAACTTGGCATGCTATGAAAAAAAGTGTTGGTAAAATAAAAGAGCATAACATAGAAATTTTAGATGGGAAATCTGTAGT
TATAAATGATATGGAAATAAACCCTTTTGCCATATCTCATGATGCTGCCTCCCCTTTTGGATATACTATATGTTCTAAAA
ATAAAAAAGCAAGCATTGCTACAGATTTAGGTGTATTTTCAAGAGATATACAAAATATTTTAGAAGATTGTGATGTAGTA
TTGCTTGAAAGTAATCACGATACAGAAATGCTGAAATTTGGTCCATACCCTTATACTTTAAAAAGAAGAATTTTAAGCAA
TATAGGCCACTTATCTAATGAAGATTGTGGTAGAGCTATAATAAATATTACTAATAATAAGTATAAAAATATAATATTAG
GGCATCTTAGTAAAACTAATAATTTCCCTGAGCTTGCTTATCAAACTGTTTTAAATGCATTAAACTCTTCTGATATTAGA
GTAGGTAAAGAACTTTCTTTATCCGTTGCTAAAAGAGATACTCCAAGTAACTATATAGAATTTTAG

Upstream 100 bases:

>100_bases
GAGCATATAGATAGAGGATACCCAAATATTGAAAATAAATTTAGATCCTTAGGGGCTACTATAGTTAGACTATAGTTAAG
TTACAATTTAAAATTTTATT

Downstream 100 bases:

>100_bases
GGTAAGGTGATTAAATTTGAAAAAATCTATTAAATTAGCTTTTTGCTCATCTTTAATAATTTCTTCGGTATTTTTTATAT
CCTGTGAAAAAAAAGATAGC

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIFCSLYSGSSGNSIFISSEKSKILIDAGLSGKSIELALDRIKESPSSINGIFVTHEHIDHIKGVGVLSRKYDIPIYANA
KTWHAMKKSVGKIKEHNIEILDGKSVVINDMEINPFAISHDAASPFGYTICSKNKKASIATDLGVFSRDIQNILEDCDVV
LLESNHDTEMLKFGPYPYTLKRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNALNSSDIR
VGKELSLSVAKRDTPSNYIEF

Sequences:

>Translated_261_residues
MIFCSLYSGSSGNSIFISSEKSKILIDAGLSGKSIELALDRIKESPSSINGIFVTHEHIDHIKGVGVLSRKYDIPIYANA
KTWHAMKKSVGKIKEHNIEILDGKSVVINDMEINPFAISHDAASPFGYTICSKNKKASIATDLGVFSRDIQNILEDCDVV
LLESNHDTEMLKFGPYPYTLKRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNALNSSDIR
VGKELSLSVAKRDTPSNYIEF
>Mature_261_residues
MIFCSLYSGSSGNSIFISSEKSKILIDAGLSGKSIELALDRIKESPSSINGIFVTHEHIDHIKGVGVLSRKYDIPIYANA
KTWHAMKKSVGKIKEHNIEILDGKSVVINDMEINPFAISHDAASPFGYTICSKNKKASIATDLGVFSRDIQNILEDCDVV
LLESNHDTEMLKFGPYPYTLKRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNALNSSDIR
VGKELSLSVAKRDTPSNYIEF

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 28919; Mature: 28919

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFCSLYSGSSGNSIFISSEKSKILIDAGLSGKSIELALDRIKESPSSINGIFVTHEHID
CEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEHHHHH
HIKGVGVLSRKYDIPIYANAKTWHAMKKSVGKIKEHNIEILDGKSVVINDMEINPFAISH
HHCCCEEECEEECCEEEECCHHHHHHHHHHHHHHHCCEEEECCCEEEEEEEECCCEEEEC
DAASPFGYTICSKNKKASIATDLGVFSRDIQNILEDCDVVLLESNHDTEMLKFGPYPYTL
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCHHH
KRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNALNSSDIR
HHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCE
VGKELSLSVAKRDTPSNYIEF
ECCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MIFCSLYSGSSGNSIFISSEKSKILIDAGLSGKSIELALDRIKESPSSINGIFVTHEHID
CEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEHHHHH
HIKGVGVLSRKYDIPIYANAKTWHAMKKSVGKIKEHNIEILDGKSVVINDMEINPFAISH
HHCCCEEECEEECCEEEECCHHHHHHHHHHHHHHHCCEEEECCCEEEEEEEECCCEEEEC
DAASPFGYTICSKNKKASIATDLGVFSRDIQNILEDCDVVLLESNHDTEMLKFGPYPYTL
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCHHH
KRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNALNSSDIR
HHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCE
VGKELSLSVAKRDTPSNYIEF
ECCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]