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The map label for this gene is 226949469

Identifier: 226949469

GI number: 226949469

Start: 2481921

End: 2483192

Strand: Direct

Name: 226949469

Synonym: CLM_2402

Alternate gene names: NA

Gene position: 2481921-2483192 (Clockwise)

Preceding gene: 226949458

Following gene: 226949470

Centisome position: 59.73

GC content: 31.13

Gene sequence:

>1272_bases
ATGGATTTAATTAAGCACTATGGTTCAATTATAAAAAAGAACATAGATACTCCATCACGCACTCGCGGTCTTTTAAAAAC
AGGATATACTCTTAATTACAAATTTATGGACAAGTTTCCTAACCATCAATTCCCTTCATCCCTACAATATCTTGAAAAAA
TATGCATGAAATTTATATTAGAACCTCTTAAACATCCAGAACGGTCTGCAATGGTGAATTTATTTGCTCCTTGTGAATTT
TTGCATGCTCTAGACATTTATCCCCTGTTTGTTGAAGGGATTTCTTCTTATTTATCGGGAACGAAATGTGAAGATGGCTT
TATAGATTACGCAGAAAAAATGAATATTCCAGAAACCCTTTGTAGTTATCACAAAACCTTTATAGGAGCTGTTGAATCAA
AGCTACTTCCCAAACCACGGTTTGCAGTTACAACTACTATGGCCTGCGATGCCAACATAAATACCTTTAGACATGTTGCA
AATTGTTTTGATATTGAATTGTACATTATTGACATTCCTTATGAATATTCAAAGGATGCAGAGGAATATGTAGCTTCTCA
ATTATATGAAATGGTAGAAATGATTCAGGATATAATGAGTGTTAAATTAGATGAAACTAAGTTAAAAAAAGTCCTTCATA
ATGAAAATCTTTCTAGAAAATATCAGCTAAAATATATGAAGGAGCTTTCCCTTAGGTATTTTCCTAATACATTAACCTTT
GAAATGTATAAGCTTTTTACTTCCCACATAGCTATGGGTAGATTAGAGACTCTAGAATTTTATAAAAAGATCTATGAAGA
TATTCTTACCTATGATAAATGTGAATGTAAAAAATTCTTATGGGTTCATTTGCTACCTTTTTATCAAGAAACTCTAAAAA
AATATTTTAACAATAATAAAGAAATTCAATTATTAGCCTGCGATCTATCCTTCGATTATTTAGAAGAGCTGGATGTAAAA
AATCCTTATAATGCAATAGCAAAAAAACTCATACTAAATCATTTTAATGGTCCACACTTAAGAAGGGCAGAAAGTATATT
GCACGCAGCAAAAACTCTTAATGCAGATGCAGTAATAAATTTTTGTCATTGGGGCTGTAAGCAGTCCAATGGAGGATCTA
TATTACTTAAAAAGGTTATGGAAGAAAACAATATTCCTTATCTATCCATAGATGGAGATGGAGTTGATAGACGAAATTCT
CATGATGGTCAACTTCGTACCAGATTAGAAGCATTTTTTGAAATTTTAAAAAATAATGAAGGAGGTATTTAA

Upstream 100 bases:

>100_bases
ATCTTTTATAGTATTTACATATTAATTATTTTGTGGCATATTATATATTGTAATAATTTAACTATTTTAGCTATATTTAT
AAATAAGGATTGGTGATGAA

Downstream 100 bases:

>100_bases
ATATGTTTGCATATACTTGTAAATATGCCCCCCTTTCTATACTTGAGACTTTTGATGAAGTCCCTATAAAAATAAATCCT
ATAGCATATACCTTTGATAA

Product: 2-hydroxyglutaryl-CoA dehydratase subunit D

Products: NA

Alternate protein names: R-2-Hydroxyglutaryl-CoA Dehydratase Subunit; Benzoyl-CoA Reductase; 2-Hydroxyglutaryl-CoA Dehydratase Subunit Alpha; -2-Hydroxyglutaryl-CoA Dehydratase Subunit Alpha; 2-Hydroxyglutaryl-CoA Dehydratase D-Component Subfamily; R-Phenyllactate Dehydratase B Subunit

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MDLIKHYGSIIKKNIDTPSRTRGLLKTGYTLNYKFMDKFPNHQFPSSLQYLEKICMKFILEPLKHPERSAMVNLFAPCEF
LHALDIYPLFVEGISSYLSGTKCEDGFIDYAEKMNIPETLCSYHKTFIGAVESKLLPKPRFAVTTTMACDANINTFRHVA
NCFDIELYIIDIPYEYSKDAEEYVASQLYEMVEMIQDIMSVKLDETKLKKVLHNENLSRKYQLKYMKELSLRYFPNTLTF
EMYKLFTSHIAMGRLETLEFYKKIYEDILTYDKCECKKFLWVHLLPFYQETLKKYFNNNKEIQLLACDLSFDYLEELDVK
NPYNAIAKKLILNHFNGPHLRRAESILHAAKTLNADAVINFCHWGCKQSNGGSILLKKVMEENNIPYLSIDGDGVDRRNS
HDGQLRTRLEAFFEILKNNEGGI

Sequences:

>Translated_423_residues
MDLIKHYGSIIKKNIDTPSRTRGLLKTGYTLNYKFMDKFPNHQFPSSLQYLEKICMKFILEPLKHPERSAMVNLFAPCEF
LHALDIYPLFVEGISSYLSGTKCEDGFIDYAEKMNIPETLCSYHKTFIGAVESKLLPKPRFAVTTTMACDANINTFRHVA
NCFDIELYIIDIPYEYSKDAEEYVASQLYEMVEMIQDIMSVKLDETKLKKVLHNENLSRKYQLKYMKELSLRYFPNTLTF
EMYKLFTSHIAMGRLETLEFYKKIYEDILTYDKCECKKFLWVHLLPFYQETLKKYFNNNKEIQLLACDLSFDYLEELDVK
NPYNAIAKKLILNHFNGPHLRRAESILHAAKTLNADAVINFCHWGCKQSNGGSILLKKVMEENNIPYLSIDGDGVDRRNS
HDGQLRTRLEAFFEILKNNEGGI
>Mature_423_residues
MDLIKHYGSIIKKNIDTPSRTRGLLKTGYTLNYKFMDKFPNHQFPSSLQYLEKICMKFILEPLKHPERSAMVNLFAPCEF
LHALDIYPLFVEGISSYLSGTKCEDGFIDYAEKMNIPETLCSYHKTFIGAVESKLLPKPRFAVTTTMACDANINTFRHVA
NCFDIELYIIDIPYEYSKDAEEYVASQLYEMVEMIQDIMSVKLDETKLKKVLHNENLSRKYQLKYMKELSLRYFPNTLTF
EMYKLFTSHIAMGRLETLEFYKKIYEDILTYDKCECKKFLWVHLLPFYQETLKKYFNNNKEIQLLACDLSFDYLEELDVK
NPYNAIAKKLILNHFNGPHLRRAESILHAAKTLNADAVINFCHWGCKQSNGGSILLKKVMEENNIPYLSIDGDGVDRRNS
HDGQLRTRLEAFFEILKNNEGGI

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49369; Mature: 49369

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIKHYGSIIKKNIDTPSRTRGLLKTGYTLNYKFMDKFPNHQFPSSLQYLEKICMKFIL
CCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHH
EPLKHPERSAMVNLFAPCEFLHALDIYPLFVEGISSYLSGTKCEDGFIDYAEKMNIPETL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH
CSYHKTFIGAVESKLLPKPRFAVTTTMACDANINTFRHVANCFDIELYIIDIPYEYSKDA
HHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHEEEEEEEEECCCCCCCCH
EEYVASQLYEMVEMIQDIMSVKLDETKLKKVLHNENLSRKYQLKYMKELSLRYFPNTLTF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH
EMYKLFTSHIAMGRLETLEFYKKIYEDILTYDKCECKKFLWVHLLPFYQETLKKYFNNNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EIQLLACDLSFDYLEELDVKNPYNAIAKKLILNHFNGPHLRRAESILHAAKTLNADAVIN
EEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
FCHWGCKQSNGGSILLKKVMEENNIPYLSIDGDGVDRRNSHDGQLRTRLEAFFEILKNNE
HHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
GGI
CCC
>Mature Secondary Structure
MDLIKHYGSIIKKNIDTPSRTRGLLKTGYTLNYKFMDKFPNHQFPSSLQYLEKICMKFIL
CCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHH
EPLKHPERSAMVNLFAPCEFLHALDIYPLFVEGISSYLSGTKCEDGFIDYAEKMNIPETL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH
CSYHKTFIGAVESKLLPKPRFAVTTTMACDANINTFRHVANCFDIELYIIDIPYEYSKDA
HHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHEEEEEEEEECCCCCCCCH
EEYVASQLYEMVEMIQDIMSVKLDETKLKKVLHNENLSRKYQLKYMKELSLRYFPNTLTF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH
EMYKLFTSHIAMGRLETLEFYKKIYEDILTYDKCECKKFLWVHLLPFYQETLKKYFNNNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EIQLLACDLSFDYLEELDVKNPYNAIAKKLILNHFNGPHLRRAESILHAAKTLNADAVIN
EEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
FCHWGCKQSNGGSILLKKVMEENNIPYLSIDGDGVDRRNSHDGQLRTRLEAFFEILKNNE
HHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
GGI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA