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The map label for this gene is gerAB [H]

Identifier: 226947347

GI number: 226947347

Start: 155118

End: 156215

Strand: Direct

Name: gerAB [H]

Synonym: CLM_0167

Alternate gene names: 226947347

Gene position: 155118-156215 (Clockwise)

Preceding gene: 226947346

Following gene: 226947348

Centisome position: 3.73

GC content: 24.95

Gene sequence:

>1098_bases
ATGGTGAGGGATGAGAACTTTGTAACATCTTATAGTTTGTTTGCTACTATTGTAACTAGTGTTATTGGAGTAAGTGTATT
TTCTTATGCTAGTGATCTTGCAGATATTGTTGGAAATGATGGCTGGATTGTAATAATAATAAGTGCTTTAATTAATTTTG
GCTTAATATATATCATGTATTTAATAATAAAATTTAATAATTATAACGAGTTTTATAAAATAGTAAATGATAATTTTGGA
AAGTATCTAGGAAAAATTATAGTTTTAAGTTTTATTATTTATAATGTTATATATATATCAAATGGATTAAGAGTTTTTGT
AGAAGAAATGAAATTGTATTTATTAGAAAAAACTCCTACAGAATTTTTGATAATCATTAGTGTAATGGTGGCTAGTTATC
TTATAAGAGGAGAGGTAGATACCCTTGTTAAATTTAATGAAGTAGTTTTCTGGGTTAGTTTTATTCCAGTTATATTTGTA
TTATTGTTTGCATTTTATCAAGGGGACTTTACTAATTTATTACCCGTATTGCAAAATAAGCCTAGTAGTTATGTAACAGC
TACATGGGCTACAATAAACAGATTCAAAGGGACAGAGATCATATTTTTATTATTACCTTTTATGAAAAAAAAGAATAAAA
CATCAAAAATATTATTTAACAGCTTATTTTTTATAGGAATTTTTTATATTTTAGTAGTAATTTTATCTGTAACTATGTTT
TCAGCAGAACAGGTGAAATTAATGCTTTGGCCAGGAATAACCATGATAAAATCAATAGACATACCAGGTACATTTATTGA
AAGATGGGAGGGTATAATTATGGCTATATGGACATTATTCTTTTTTACTACATTTACCAATATATATTATTTTTCAGCAG
ATATATTAAAAAATATGGTACATATAGAAGATATAAAAATATCATCTTTACTTATAATGCCATTTGTATATATTATTGCA
CTATATCCTGAAAATGTGGTAGAGGTAATTGATGTAGGTAAGATTTTAATGCCCATATTATTTATTATAAATATGGTGGT
TATCCCTATAATTTTATTTTTAATAAGTAAATCTAAATTAAGTAAGAGGAAGGGATAA

Upstream 100 bases:

>100_bases
ATGTATATAAGAGCACCTATAAGATTTTTTAAGAAAAGACCAGATTACATGAAAACTAGAGATAAAATAAGACAAAGATA
AAGTAGATTTGGAGGAATTA

Downstream 100 bases:

>100_bases
TATTAAAAGTAAGTATAAGCATAAATATATATTTGGGAGTTGTTATATTATGAAATCAAAAAAGTGTTTAGCTATAATAC
TTATATTATCAACCATATGT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLADIVGNDGWIVIIISALINFGLIYIMYLIIKFNNYNEFYKIVNDNFG
KYLGKIIVLSFIIYNVIYISNGLRVFVEEMKLYLLEKTPTEFLIIISVMVASYLIRGEVDTLVKFNEVVFWVSFIPVIFV
LLFAFYQGDFTNLLPVLQNKPSSYVTATWATINRFKGTEIIFLLLPFMKKKNKTSKILFNSLFFIGIFYILVVILSVTMF
SAEQVKLMLWPGITMIKSIDIPGTFIERWEGIIMAIWTLFFFTTFTNIYYFSADILKNMVHIEDIKISSLLIMPFVYIIA
LYPENVVEVIDVGKILMPILFIINMVVIPIILFLISKSKLSKRKG

Sequences:

>Translated_365_residues
MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLADIVGNDGWIVIIISALINFGLIYIMYLIIKFNNYNEFYKIVNDNFG
KYLGKIIVLSFIIYNVIYISNGLRVFVEEMKLYLLEKTPTEFLIIISVMVASYLIRGEVDTLVKFNEVVFWVSFIPVIFV
LLFAFYQGDFTNLLPVLQNKPSSYVTATWATINRFKGTEIIFLLLPFMKKKNKTSKILFNSLFFIGIFYILVVILSVTMF
SAEQVKLMLWPGITMIKSIDIPGTFIERWEGIIMAIWTLFFFTTFTNIYYFSADILKNMVHIEDIKISSLLIMPFVYIIA
LYPENVVEVIDVGKILMPILFIINMVVIPIILFLISKSKLSKRKG
>Mature_365_residues
MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLADIVGNDGWIVIIISALINFGLIYIMYLIIKFNNYNEFYKIVNDNFG
KYLGKIIVLSFIIYNVIYISNGLRVFVEEMKLYLLEKTPTEFLIIISVMVASYLIRGEVDTLVKFNEVVFWVSFIPVIFV
LLFAFYQGDFTNLLPVLQNKPSSYVTATWATINRFKGTEIIFLLLPFMKKKNKTSKILFNSLFFIGIFYILVVILSVTMF
SAEQVKLMLWPGITMIKSIDIPGTFIERWEGIIMAIWTLFFFTTFTNIYYFSADILKNMVHIEDIKISSLLIMPFVYIIA
LYPENVVEVIDVGKILMPILFIINMVVIPIILFLISKSKLSKRKG

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter. Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 42038; Mature: 42038

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCC
>Mature Secondary Structure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HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3110007; 9639930; 9384377; 8382989 [H]