Click here to switch to the map view.

The map label for this gene is yhaA [H]

Identifier: 226225369

GI number: 226225369

Start: 2871379

End: 2872581

Strand: Reverse

Name: yhaA [H]

Synonym: Lm4b_02792

Alternate gene names: 226225369

Gene position: 2872581-2871379 (Counterclockwise)

Preceding gene: 226225370

Following gene: 226225368

Centisome position: 98.62

GC content: 40.23

Gene sequence:

>1203_bases
ATGGAGGTTTGGACAATGAAAGAGAAGTTATTTCAAAAACTAGACGAAAAACGAGATCGCATGATAGAAATTCGTCGTTA
CTTACATGAACACCCTGAACTTTCTTTTCAAGAGGAAAATACGGCGAAGTATATTGCGGATTTTTATAAAGAAATGGACT
GCGATGTGCGGACGCATGTTGGTGGGAATGGCGTTGTAGTAACGATTGATACAGGCAAGCCGGGCAAGACACTTGCAATT
CGTGCTGATTTTGATGCACTTCCTATCCAAGAAGAAACAGGTCTAGCTTTTGCATCTAAAAACCCTGGTGTAATGCACGC
TTGTGGTCACGATGGACATACAGCTTACATGCTTATTTTGGGCGAAACACTTATTGAAATGAAACAAGAATTAACCGGGA
AAATAGTTATTTTACATCAGCATGCGGAAGAAACTCCTCCTGGTGGCGCGATTCAAATGATTCAAGACGGGGCGCTGGAT
GGTGTTGATAATGTCCTTGGGATTCATGTGATGTCTACGATGAAAACGGGTGAAGTTTTCTACCGTGAGGGTGCAATTCA
AACTGGTCGCTCTTATTTCAAACTTAAAGTACAAGGTCAAGGTGGACATGGCTCATCTCCGCATTTAGCGAATGATGCTA
TTGTTGCAGCAAGTGAATTTGTAGTAGCTGTTCAAACGGTGATTAGTCGTCGTTTAAATCCATTTGATGTTGGTTCGATT
ACAATTGGTTCTTTTGATGGAAAAGGTAGCTTTAATGTCATCAAGGATGCGGTTGAGCTTGAAGGCGATGTGCGCTCTAT
GTCTGAAGAGGCACGCAACATTATTCAAAAAGAAATTACCCGTATCGTTAGTGGAATAGAGGCAATGTTTGGCGTTACTT
GTGAACTTGATTACAAAAATGATTATCCTGTTTTAAATAATGACGAAGCTTTGACTGATTTTGTTGTTAAATCTATTAAA
GGGGCGAAAATTCCAGAAATTACAGATGTTGTGCGCTGTGAACCGCAACCACCATCAGAAGACTTTGCTTATTATGCAAA
AGAACGTCCGAGCTCATTTTTCTATGTGGGAGCGATGCCGGCAGATGGGCATTTTTATCCGCATCATCATCCAAAATTTG
ACATCAATGAAGATTCATTATTAATTGCATCAAAAGCCATGGGAGCTTGTGTTGTAGATTACTTAAAAGGAGAGAATAAC
TAA

Upstream 100 bases:

>100_bases
GCTAAAACTAAGCAAAAAAGTAAACTTCTTTTCGCTTGGTTTTTTTTATAATTAAGTTGTAGTGAAAATACGGAAGTTCT
GGCCAGCGGAAGTATTAAAA

Downstream 100 bases:

>100_bases
TGACTTCAACAGCGTATAAAGGTACAAATAAACTTATTGTTGGGATTGTTTTCGGGGTTATCACGTTTTGGCTTTTCGCA
CAATCAATGGTGAATATCGT

Product: carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MEVWTMKEKLFQKLDEKRDRMIEIRRYLHEHPELSFQEENTAKYIADFYKEMDCDVRTHVGGNGVVVTIDTGKPGKTLAI
RADFDALPIQEETGLAFASKNPGVMHACGHDGHTAYMLILGETLIEMKQELTGKIVILHQHAEETPPGGAIQMIQDGALD
GVDNVLGIHVMSTMKTGEVFYREGAIQTGRSYFKLKVQGQGGHGSSPHLANDAIVAASEFVVAVQTVISRRLNPFDVGSI
TIGSFDGKGSFNVIKDAVELEGDVRSMSEEARNIIQKEITRIVSGIEAMFGVTCELDYKNDYPVLNNDEALTDFVVKSIK
GAKIPEITDVVRCEPQPPSEDFAYYAKERPSSFFYVGAMPADGHFYPHHHPKFDINEDSLLIASKAMGACVVDYLKGENN

Sequences:

>Translated_400_residues
MEVWTMKEKLFQKLDEKRDRMIEIRRYLHEHPELSFQEENTAKYIADFYKEMDCDVRTHVGGNGVVVTIDTGKPGKTLAI
RADFDALPIQEETGLAFASKNPGVMHACGHDGHTAYMLILGETLIEMKQELTGKIVILHQHAEETPPGGAIQMIQDGALD
GVDNVLGIHVMSTMKTGEVFYREGAIQTGRSYFKLKVQGQGGHGSSPHLANDAIVAASEFVVAVQTVISRRLNPFDVGSI
TIGSFDGKGSFNVIKDAVELEGDVRSMSEEARNIIQKEITRIVSGIEAMFGVTCELDYKNDYPVLNNDEALTDFVVKSIK
GAKIPEITDVVRCEPQPPSEDFAYYAKERPSSFFYVGAMPADGHFYPHHHPKFDINEDSLLIASKAMGACVVDYLKGENN
>Mature_400_residues
MEVWTMKEKLFQKLDEKRDRMIEIRRYLHEHPELSFQEENTAKYIADFYKEMDCDVRTHVGGNGVVVTIDTGKPGKTLAI
RADFDALPIQEETGLAFASKNPGVMHACGHDGHTAYMLILGETLIEMKQELTGKIVILHQHAEETPPGGAIQMIQDGALD
GVDNVLGIHVMSTMKTGEVFYREGAIQTGRSYFKLKVQGQGGHGSSPHLANDAIVAASEFVVAVQTVISRRLNPFDVGSI
TIGSFDGKGSFNVIKDAVELEGDVRSMSEEARNIIQKEITRIVSGIEAMFGVTCELDYKNDYPVLNNDEALTDFVVKSIK
GAKIPEITDVVRCEPQPPSEDFAYYAKERPSSFFYVGAMPADGHFYPHHHPKFDINEDSLLIASKAMGACVVDYLKGENN

Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=383, Percent_Identity=26.6318537859008, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 44277; Mature: 44277

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVWTMKEKLFQKLDEKRDRMIEIRRYLHEHPELSFQEENTAKYIADFYKEMDCDVRTHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE
GGNGVVVTIDTGKPGKTLAIRADFDALPIQEETGLAFASKNPGVMHACGHDGHTAYMLIL
CCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEH
GETLIEMKQELTGKIVILHQHAEETPPGGAIQMIQDGALDGVDNVLGIHVMSTMKTGEVF
HHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE
YREGAIQTGRSYFKLKVQGQGGHGSSPHLANDAIVAASEFVVAVQTVISRRLNPFDVGSI
EECCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE
TIGSFDGKGSFNVIKDAVELEGDVRSMSEEARNIIQKEITRIVSGIEAMFGVTCELDYKN
EEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
DYPVLNNDEALTDFVVKSIKGAKIPEITDVVRCEPQPPSEDFAYYAKERPSSFFYVGAMP
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCHHHHHHHHCCCCCEEEEEECC
ADGHFYPHHHPKFDINEDSLLIASKAMGACVVDYLKGENN
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEVWTMKEKLFQKLDEKRDRMIEIRRYLHEHPELSFQEENTAKYIADFYKEMDCDVRTHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE
GGNGVVVTIDTGKPGKTLAIRADFDALPIQEETGLAFASKNPGVMHACGHDGHTAYMLIL
CCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEH
GETLIEMKQELTGKIVILHQHAEETPPGGAIQMIQDGALDGVDNVLGIHVMSTMKTGEVF
HHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE
YREGAIQTGRSYFKLKVQGQGGHGSSPHLANDAIVAASEFVVAVQTVISRRLNPFDVGSI
EECCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE
TIGSFDGKGSFNVIKDAVELEGDVRSMSEEARNIIQKEITRIVSGIEAMFGVTCELDYKN
EEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
DYPVLNNDEALTDFVVKSIKGAKIPEITDVVRCEPQPPSEDFAYYAKERPSSFFYVGAMP
CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCHHHHHHHHCCCCCEEEEEECC
ADGHFYPHHHPKFDINEDSLLIASKAMGACVVDYLKGENN
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]