| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225319
Identifier: 226225319
GI number: 226225319
Start: 2820199
End: 2820861
Strand: Reverse
Name: 226225319
Synonym: Lm4b_02742
Alternate gene names: NA
Gene position: 2820861-2820199 (Counterclockwise)
Preceding gene: 226225320
Following gene: 226225318
Centisome position: 96.85
GC content: 37.86
Gene sequence:
>663_bases TTGACGACAGAAACAGAAACGATTAAACCGCAGTTAGCTGAATTGAAAGCTAATTTAACGAAGCGGAACTTGCAATATGT GATGGAAGTAGAAAAACATTTGCGAGAAACTCATTACAGCGCAGAACAACAAGAGATTATTGTTTATGAAATGAGCGAAA AGATTTTAGCCGAACAGAAAAAAGGCATAACAGCGAGAAAATTATTTAATTTAACACCAACAGAATATGTTGTTTCTTTA GATGTGAAAGCTGCTACAGTGGAGCAAAATACGGACAAATGGTGGCTAGTACTTGACGGTGGACTCCTTGTACTTGGAGC GATGATGCTGATTTCCGGAATTAGTGCTTATTTCCAAAAAAACGCGCAGACTTTAGGAATTATCGTGTTATTAATCACTG CAGTTGTCGGTGGTTTCGCAATGCTTATCTTGCGTAAATACGCGTCAAACATGCGTGCAGGCCAAAAAGGTGGAACGATA AAATACTTACTAGTAGCAGTCGGAGTCATTGCAGTGTGGATGTTTGTAATGACGATTGTACAAGTAACTATTCCTCCAAA TATCAATGTAGCGTTAAGTCCGATTGTTAACACAGTTGGTGGTGCAATTATTATTGCCCTACGTTTCTATGTGAAGAAAA AGAAAAATATTCCATCCTTATAA
Upstream 100 bases:
>100_bases GGGCTTTTTCAATTGTCTAAAACGAATTAAAAAAATAGCTTTTTTATAGCAGGTAAGTCCGGTATAATAGAGGATAGAAT GAGCGAGGGAGGATTTAGCA
Downstream 100 bases:
>100_bases TAAGATGGACACGGACAGGTGACCTAGATTGCATAATGCGAGTTGGGTCGCCTGTTTTTATTTCCCGGGAAATACTGATA CAGATGAGGTGAATAAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYSAEQQEIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSL DVKAATVEQNTDKWWLVLDGGLLVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTI KYLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIPSL
Sequences:
>Translated_220_residues MTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYSAEQQEIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSL DVKAATVEQNTDKWWLVLDGGLLVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTI KYLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIPSL >Mature_219_residues TTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYSAEQQEIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSLD VKAATVEQNTDKWWLVLDGGLLVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTIK YLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIPSL
Specific function: Unknown
COG id: COG4858
COG function: function code S; Uncharacterized membrane-bound protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24396; Mature: 24265
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYSAEQQEIIVYEMSEKILAEQK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHH KGITARKLFNLTPTEYVVSLDVKAATVEQNTDKWWLVLDGGLLVLGAMMLISGISAYFQK CCCHHHHHHCCCCHHEEEEECCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC NAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTIKYLLVAVGVIAVWMFVMTIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIPSL HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYSAEQQEIIVYEMSEKILAEQK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHH KGITARKLFNLTPTEYVVSLDVKAATVEQNTDKWWLVLDGGLLVLGAMMLISGISAYFQK CCCHHHHHHCCCCHHEEEEECCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC NAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTIKYLLVAVGVIAVWMFVMTIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIPSL HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA