Click here to switch to the map view.

The map label for this gene is 226225320

Identifier: 226225320

GI number: 226225320

Start: 2820932

End: 2822062

Strand: Reverse

Name: 226225320

Synonym: Lm4b_02743

Alternate gene names: NA

Gene position: 2822062-2820932 (Counterclockwise)

Preceding gene: 226225321

Following gene: 226225319

Centisome position: 96.89

GC content: 35.9

Gene sequence:

>1131_bases
ATGTTTAATCGAGGTTTATGGTACCGAGAATGGCGTAATATGAGATGGATGCTTTTGGGTGTTGTGATACTATTTTTCTT
AGGAATTACTTTGGGACTAATGTCAGACGCAGATAGATGGAATAGTCAAAAAGAGTACTACGAATCAAGTGAGTTTTTAA
AGCAACAGAAAGAAAATCCTGAATTTAAAACTTCTGATGAGGAAATGAAAGCTAGTTTGACAGTGGCGTATTTAGCGGTT
CCAATGTATACAAATTTTGTTCAAGATGAGTTTGTAGATTACATGCCATTTATGTTTTATTTTCAAGTAGAAATGTTTTT
TACATTGATTAAGGTGAGTGTTTTTATTTTAGGGGTTTTGGCAGTTATTTTTGAGCGCTACACAAGAGCGAATCGTTTTA
CGGCATCATTACCATATAAACGGACGCACATAGTTGGGGTTAAAATGATGATGGGAATAGCGACCATTGGGCTGAGTTAT
CTTATCTCGATGGGAATTGGGTTGACATACTTCATGTCGCATGTTCCAAAAGAATATATTCAATTAGATGCACCAAAATT
TTGGGTGGATATAGTTGGTGGATTATTTACTTATTTACTTATATTTTTAGTAGCTATTTTAATTGGTTTATTGATAGGTT
CGCCTATTGCTGCGGCTTTTGTGGCATTTGGTGTGATGTTACTGCCGAGCGTGTTAAATCCTACTTTAGATAACATGTAT
AACTTTATTTGGCCGCATGGCGGAGATAAAGGGATGTCTAAACTGCTACGATTTGAGGATTATGTGAACATATTTTCTCC
GTTTTCGTTTGAGTCCGCCTCGTTTGGGGCTGTGATTTTTAGCGTAATATTAAGTGTACTCATGGTTGTTGCTATTTTAA
TCTTATATAAGAAGCAGCATATTGAACGAAGTGGTTATTTATTTGCATTTTCTTGGGTTAAATGGCCGTTTTTAGTGTTG
TTTTCGTTATTTGTTGGGATGACTGCAGCTAATTTGGCAGTAACAGATACAGAGCTTGGTTTCGTTGGCTATTTAGCTTG
GGGAATTGGCGCGACGATTGGTAGTTTTATTTTAGCACTCTACATTTTAAACAAAATGCGCGGGCTTTTTCAATTGTCTA
AAACGAATTAA

Upstream 100 bases:

>100_bases
AAATGTCGATCTCGATAGAAGACATTTTCACGGTGCATTTAGCAAATGATAAAATAGATTATTACGAGATTTAAAACAGA
CAGGAGGGACAAGGCTAATA

Downstream 100 bases:

>100_bases
AAAAATAGCTTTTTTATAGCAGGTAAGTCCGGTATAATAGAGGATAGAATGAGCGAGGGAGGATTTAGCATTGACGACAG
AAACAGAAACGATTAAACCG

Product: Hypothetical membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MFNRGLWYREWRNMRWMLLGVVILFFLGITLGLMSDADRWNSQKEYYESSEFLKQQKENPEFKTSDEEMKASLTVAYLAV
PMYTNFVQDEFVDYMPFMFYFQVEMFFTLIKVSVFILGVLAVIFERYTRANRFTASLPYKRTHIVGVKMMMGIATIGLSY
LISMGIGLTYFMSHVPKEYIQLDAPKFWVDIVGGLFTYLLIFLVAILIGLLIGSPIAAAFVAFGVMLLPSVLNPTLDNMY
NFIWPHGGDKGMSKLLRFEDYVNIFSPFSFESASFGAVIFSVILSVLMVVAILILYKKQHIERSGYLFAFSWVKWPFLVL
FSLFVGMTAANLAVTDTELGFVGYLAWGIGATIGSFILALYILNKMRGLFQLSKTN

Sequences:

>Translated_376_residues
MFNRGLWYREWRNMRWMLLGVVILFFLGITLGLMSDADRWNSQKEYYESSEFLKQQKENPEFKTSDEEMKASLTVAYLAV
PMYTNFVQDEFVDYMPFMFYFQVEMFFTLIKVSVFILGVLAVIFERYTRANRFTASLPYKRTHIVGVKMMMGIATIGLSY
LISMGIGLTYFMSHVPKEYIQLDAPKFWVDIVGGLFTYLLIFLVAILIGLLIGSPIAAAFVAFGVMLLPSVLNPTLDNMY
NFIWPHGGDKGMSKLLRFEDYVNIFSPFSFESASFGAVIFSVILSVLMVVAILILYKKQHIERSGYLFAFSWVKWPFLVL
FSLFVGMTAANLAVTDTELGFVGYLAWGIGATIGSFILALYILNKMRGLFQLSKTN
>Mature_376_residues
MFNRGLWYREWRNMRWMLLGVVILFFLGITLGLMSDADRWNSQKEYYESSEFLKQQKENPEFKTSDEEMKASLTVAYLAV
PMYTNFVQDEFVDYMPFMFYFQVEMFFTLIKVSVFILGVLAVIFERYTRANRFTASLPYKRTHIVGVKMMMGIATIGLSY
LISMGIGLTYFMSHVPKEYIQLDAPKFWVDIVGGLFTYLLIFLVAILIGLLIGSPIAAAFVAFGVMLLPSVLNPTLDNMY
NFIWPHGGDKGMSKLLRFEDYVNIFSPFSFESASFGAVIFSVILSVLMVVAILILYKKQHIERSGYLFAFSWVKWPFLVL
FSLFVGMTAANLAVTDTELGFVGYLAWGIGATIGSFILALYILNKMRGLFQLSKTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43027; Mature: 43027

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRGLWYREWRNMRWMLLGVVILFFLGITLGLMSDADRWNSQKEYYESSEFLKQQKENP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCC
EFKTSDEEMKASLTVAYLAVPMYTNFVQDEFVDYMPFMFYFQVEMFFTLIKVSVFILGVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVIFERYTRANRFTASLPYKRTHIVGVKMMMGIATIGLSYLISMGIGLTYFMSHVPKEYI
HHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
QLDAPKFWVDIVGGLFTYLLIFLVAILIGLLIGSPIAAAFVAFGVMLLPSVLNPTLDNMY
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHH
NFIWPHGGDKGMSKLLRFEDYVNIFSPFSFESASFGAVIFSVILSVLMVVAILILYKKQH
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERSGYLFAFSWVKWPFLVLFSLFVGMTAANLAVTDTELGFVGYLAWGIGATIGSFILAL
HCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
YILNKMRGLFQLSKTN
HHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA