| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is hrsA [H]
Identifier: 226224744
GI number: 226224744
Start: 2222244
End: 2222717
Strand: Reverse
Name: hrsA [H]
Synonym: Lm4b_02161
Alternate gene names: 226224744
Gene position: 2222717-2222244 (Counterclockwise)
Preceding gene: 226224745
Following gene: 226224743
Centisome position: 76.31
GC content: 36.29
Gene sequence:
>474_bases ATGGATATCCAAGATTTAGATATTAGTAAAGTAATAAGCCCAGCACTTGTAAATTTAGACTTACAAGCTACAAGTAAATT AGAAGTCATTGAAGAGTTAACAGATTTACTTGTTGAAACTGGGGCAGTAGCAGACAAAGATGCTTTTATAGCAGATGTAT TATATCGCGAAGAAGAAGGCAAAACGGGACTAGGAGAAGGAGTCGCTATTCCACACGGGAAGTCGGCGAGCGTTACGAGT ACATCCATTGCCGTTGGAAGAACTAAAAAACCTGTTGAGTGGGAGTCGCTTGATGATAAACCAGTAAATATTATTATTCT TTTCGCAGTGAAAAATTCAGATGCTACAACAACTCATATTAAATTACTTCAAAAAGTAGCAATCTTACTTGCGGACGATG AGGTGATTGGCCAATTTCAAACTGTAAAAACAAAAGAAGATTTAATTAAGTTGTTAGCCAAAAATCAGGATTAG
Upstream 100 bases:
>100_bases GTACGAAAGAAATCCCATCGTTACTTGTAAGTGCGATGTTTACCGAGAAAGATAAAATAATGGTAAAAAAACTGATGGAA AGTTTATAGGAGGCGAATTC
Downstream 100 bases:
>100_bases GAGGAGTTTGGAATGAATATTATTGGAATAGCAGCTTGTACATCGGGAATCGCACATACGTATATTGCTAAAGAAAAACT AACAAAAGCAGGGACAGCGC
Product: PTS system, fructose-specific enzyme IIA component
Products: NA
Alternate protein names: Putative PTS system EIIABC component; Phosphotransferase enzyme IIA component; PTS system EIIA component; Phosphotransferase enzyme IIB component; PTS system EIIB component; Permease IIC component; PTS system EIIC component [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MDIQDLDISKVISPALVNLDLQATSKLEVIEELTDLLVETGAVADKDAFIADVLYREEEGKTGLGEGVAIPHGKSASVTS TSIAVGRTKKPVEWESLDDKPVNIIILFAVKNSDATTTHIKLLQKVAILLADDEVIGQFQTVKTKEDLIKLLAKNQD
Sequences:
>Translated_157_residues MDIQDLDISKVISPALVNLDLQATSKLEVIEELTDLLVETGAVADKDAFIADVLYREEEGKTGLGEGVAIPHGKSASVTS TSIAVGRTKKPVEWESLDDKPVNIIILFAVKNSDATTTHIKLLQKVAILLADDEVIGQFQTVKTKEDLIKLLAKNQD >Mature_157_residues MDIQDLDISKVISPALVNLDLQATSKLEVIEELTDLLVETGAVADKDAFIADVLYREEEGKTGLGEGVAIPHGKSASVTS TSIAVGRTKKPVEWESLDDKPVNIIILFAVKNSDATTTHIKLLQKVAILLADDEVIGQFQTVKTKEDLIKLLAKNQD
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1786951, Length=135, Percent_Identity=37.037037037037, Blast_Score=103, Evalue=5e-24, Organism=Escherichia coli, GI2367327, Length=137, Percent_Identity=27.7372262773723, Blast_Score=74, Evalue=3e-15, Organism=Escherichia coli, GI1789597, Length=148, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1788494, Length=134, Percent_Identity=32.089552238806, Blast_Score=60, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 17009; Mature: 17009
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIQDLDISKVISPALVNLDLQATSKLEVIEELTDLLVETGAVADKDAFIADVLYREEEG CCCCCCCHHHHHCHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC KTGLGEGVAIPHGKSASVTSTSIAVGRTKKPVEWESLDDKPVNIIILFAVKNSDATTTHI CCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHH KLLQKVAILLADDEVIGQFQTVKTKEDLIKLLAKNQD HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MDIQDLDISKVISPALVNLDLQATSKLEVIEELTDLLVETGAVADKDAFIADVLYREEEG CCCCCCCHHHHHCHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC KTGLGEGVAIPHGKSASVTSTSIAVGRTKKPVEWESLDDKPVNIIILFAVKNSDATTTHI CCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHH KLLQKVAILLADDEVIGQFQTVKTKEDLIKLLAKNQD HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9063979; 9278503; 8905232 [H]