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The map label for this gene is yrxA [H]

Identifier: 226224618

GI number: 226224618

Start: 2089583

End: 2090104

Strand: Reverse

Name: yrxA [H]

Synonym: Lm4b_02033

Alternate gene names: 226224618

Gene position: 2090104-2089583 (Counterclockwise)

Preceding gene: 226224619

Following gene: 226224617

Centisome position: 71.76

GC content: 37.93

Gene sequence:

>522_bases
ATGAAAAAAATATTAGGAGATACGCGTAGGCAAATGATTTTAAAATGGCTAAAAGAAGCCGAGGCGCCAATTTCTGGAAA
TCAATTAGCACAGAAAACAAATGTTAGCCGCCAAGTGATTGTTCAAGATATTTCTTTGTTAAAAGCTGGCAATGAACCAA
TTATGGCTACCCCACAAGGCTATATTTATGCGAAAGAAACAAGTTATACAGGGGAAAGGCGCGTTATTGCCGTGAAACAT
ACGAAAGAACAAGCTGCCGAGGAACTAAATATTTTGGTAGATCACGGTGTTTCCATTATTGATGTGATTGTGGATCATCC
AATATACGGCGAAATCACCGCTTCACTACATTTAAAAAGCCGTTTTGATGTAGAGAAATTTGTGCGGAAATTGCAAACAA
CAGGAGCAACAATGCTGTCTGGTTTAACGGATGGAACACATTTACATACGATTGAAGCAGATACGAAAGAACAATTAGAA
CAAGCGATTAAGGCGCTAGATAAAGCTGGATTTTTAATCTAA

Upstream 100 bases:

>100_bases
AACCGTTTTATCCGCTTATCTTTTGGAAGAGAAAATGAATTAAACGATAGTATTATTTTTAAAGAAGAAATCGATAAATT
ATTACGAAAAAGGTGATAAG

Downstream 100 bases:

>100_bases
CCATTTTTCAATATAAATTCTAGGAAAAAGCTAGTAACTATGGTAGAATGTATGTTAGGTATTTATAAACAAATAGTCGT
ATGGAGGTGCTAGATATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKKILGDTRRQMILKWLKEAEAPISGNQLAQKTNVSRQVIVQDISLLKAGNEPIMATPQGYIYAKETSYTGERRVIAVKH
TKEQAAEELNILVDHGVSIIDVIVDHPIYGEITASLHLKSRFDVEKFVRKLQTTGATMLSGLTDGTHLHTIEADTKEQLE
QAIKALDKAGFLI

Sequences:

>Translated_173_residues
MKKILGDTRRQMILKWLKEAEAPISGNQLAQKTNVSRQVIVQDISLLKAGNEPIMATPQGYIYAKETSYTGERRVIAVKH
TKEQAAEELNILVDHGVSIIDVIVDHPIYGEITASLHLKSRFDVEKFVRKLQTTGATMLSGLTDGTHLHTIEADTKEQLE
QAIKALDKAGFLI
>Mature_173_residues
MKKILGDTRRQMILKWLKEAEAPISGNQLAQKTNVSRQVIVQDISLLKAGNEPIMATPQGYIYAKETSYTGERRVIAVKH
TKEQAAEELNILVDHGVSIIDVIVDHPIYGEITASLHLKSRFDVEKFVRKLQTTGATMLSGLTDGTHLHTIEADTKEQLE
QAIKALDKAGFLI

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 19247; Mature: 19247

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILGDTRRQMILKWLKEAEAPISGNQLAQKTNVSRQVIVQDISLLKAGNEPIMATPQG
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCC
YIYAKETSYTGERRVIAVKHTKEQAAEELNILVDHGVSIIDVIVDHPIYGEITASLHLKS
EEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEECC
RFDVEKFVRKLQTTGATMLSGLTDGTHLHTIEADTKEQLEQAIKALDKAGFLI
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKILGDTRRQMILKWLKEAEAPISGNQLAQKTNVSRQVIVQDISLLKAGNEPIMATPQG
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCC
YIYAKETSYTGERRVIAVKHTKEQAAEELNILVDHGVSIIDVIVDHPIYGEITASLHLKS
EEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEECC
RFDVEKFVRKLQTTGATMLSGLTDGTHLHTIEADTKEQLEQAIKALDKAGFLI
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]